RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 HSP90B1P14625 803 aaKnown RBP29.62■■■□□ 2.33
HDGF-201ENST00000357325 SYNE4Q8N205 404 aa29.62■■■□□ 2.33
HDGF-201ENST00000357325 KRT32Q14532 448 aa29.62■■■□□ 2.33
HDGF-201ENST00000357325 CARD10Q9BWT7 1032 aa29.62■■■□□ 2.33
HDGF-201ENST00000357325 ASAP1Q9ULH1 1129 aa29.62■■■□□ 2.33
HDGF-201ENST00000357325 SH3TC1Q8TE82 1336 aa29.62■■■□□ 2.33
HDGF-201ENST00000357325 RFX7Q2KHR2 1363 aa29.61■■■□□ 2.33
HDGF-201ENST00000357325 KRT85P78386 507 aa29.61■■■□□ 2.33
HDGF-201ENST00000357325 OFD1O75665 1012 aa29.61■■■□□ 2.33
HDGF-201ENST00000357325 ADORA1P30542 326 aa29.61■■■□□ 2.33
HDGF-201ENST00000357325 SCRN1Q12765 414 aa29.61■■■□□ 2.33
HDGF-201ENST00000357325 CAMK4Q16566 473 aa29.6■■■□□ 2.33
HDGF-201ENST00000357325 FAM89AQ96GI7 184 aa29.6■■■□□ 2.33
HDGF-201ENST00000357325 ZNF830Q96NB3 372 aaPredicted RBP29.6■■■□□ 2.33
HDGF-201ENST00000357325 CCDC39Q9UFE4 941 aa29.6■■■□□ 2.33
HDGF-201ENST00000357325 PALLDQ8WX93 1383 aa29.6■■■□□ 2.33
HDGF-201ENST00000357325 IFIT1P09914 478 aaKnown RBP29.6■■■□□ 2.33
HDGF-201ENST00000357325 CHST3Q7LGC8 479 aa29.6■■■□□ 2.33
HDGF-201ENST00000357325 PAPPAQ13219 1627 aa29.59■■■□□ 2.33
HDGF-201ENST00000357325 AP5Z1O43299 807 aa29.59■■■□□ 2.33
HDGF-201ENST00000357325 FOSBP53539 338 aa29.59■■■□□ 2.33
HDGF-201ENST00000357325 ZNF335Q9H4Z2 1342 aaPredicted RBP29.59■■■□□ 2.33
HDGF-201ENST00000357325 ZNF500O60304 480 aaPredicted RBP29.59■■■□□ 2.33
HDGF-201ENST00000357325 PDCP20941 246 aa29.59■■■□□ 2.33
HDGF-201ENST00000357325 EVA1CP58658 441 aa29.59■■■□□ 2.33
HDGF-201ENST00000357325 ZMYM1Q5SVZ6 1142 aa29.59■■■□□ 2.33
HDGF-201ENST00000357325 TTLL5Q6EMB2 1281 aa29.59■■■□□ 2.33
HDGF-201ENST00000357325 DNAJC10Q8IXB1 793 aa29.59■■■□□ 2.33
HDGF-201ENST00000357325 ISCA1Q9BUE6 129 aa29.59■■■□□ 2.33
HDGF-201ENST00000357325 TNS2Q63HR2 1409 aa29.58■■■□□ 2.33
HDGF-201ENST00000357325 CSPP1Q1MSJ5 1256 aa29.58■■■□□ 2.33
HDGF-201ENST00000357325 MAST3O60307 1309 aa29.58■■■□□ 2.33
HDGF-201ENST00000357325 TOGARAM1Q9Y4F4 1720 aa29.58■■■□□ 2.33
HDGF-201ENST00000357325 M0R2C6 588 aa29.57■■■□□ 2.32
HDGF-201ENST00000357325 PTMAP06454 111 aaKnown RBP29.57■■■□□ 2.32
HDGF-201ENST00000357325 HSPD1P10809 573 aaKnown RBP29.57■■■□□ 2.32
HDGF-201ENST00000357325 GPR108Q9NPR9 543 aa29.57■■■□□ 2.32
HDGF-201ENST00000357325 LETM1O95202 739 aaPredicted RBP29.57■■■□□ 2.32
HDGF-201ENST00000357325 ADCY5O95622 1261 aa29.57■■■□□ 2.32
HDGF-201ENST00000357325 FKBP4Q02790 459 aaKnown RBP eCLIP29.57■■■□□ 2.32
HDGF-201ENST00000357325 APOBRQ0VD83 1088 aa29.57■■■□□ 2.32
HDGF-201ENST00000357325 LAMA4Q16363 1823 aa29.57■■■□□ 2.32
HDGF-201ENST00000357325 FAM184AQ8NB25 1140 aa29.57■■■□□ 2.32
HDGF-201ENST00000357325 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.57■■■□□ 2.325e-15■■□□□ 13.3
HDGF-201ENST00000357325 TCIRG1Q13488 830 aa29.56■■■□□ 2.32
HDGF-201ENST00000357325 SCARF1Q14162 830 aa29.56■■■□□ 2.32
HDGF-201ENST00000357325 HSP90AB3PQ58FF7 597 aa29.55■■■□□ 2.32
HDGF-201ENST00000357325 PIGBQ92521 554 aa29.55■■■□□ 2.32
HDGF-201ENST00000357325 HELLSQ9NRZ9 838 aa29.55■■■□□ 2.32
HDGF-201ENST00000357325 TMOD3Q9NYL9 352 aa29.55■■■□□ 2.32
HDGF-201ENST00000357325 FGD1P98174 961 aa29.55■■■□□ 2.32
HDGF-201ENST00000357325 OSBP2Q969R2 916 aa29.55■■■□□ 2.32
HDGF-201ENST00000357325 CTDNEP1O95476 244 aa29.54■■■□□ 2.32
HDGF-201ENST00000357325 PLCB2Q00722 1185 aa29.54■■■□□ 2.32
HDGF-201ENST00000357325 UVSSAQ2YD98 709 aa29.54■■■□□ 2.32
HDGF-201ENST00000357325 PI16Q6UXB8 463 aa29.54■■■□□ 2.32
HDGF-201ENST00000357325 LEO1Q8WVC0 666 aaPredicted RBP29.54■■■□□ 2.32
HDGF-201ENST00000357325 CCT2P78371 535 aaKnown RBP29.54■■■□□ 2.32
HDGF-201ENST00000357325 SPATA32Q96LK8 384 aa29.54■■■□□ 2.32
HDGF-201ENST00000357325 NCOA5Q9HCD5 579 aaKnown RBP29.54■■■□□ 2.32
HDGF-201ENST00000357325 CCDC57Q2TAC2 916 aa29.53■■■□□ 2.32
HDGF-201ENST00000357325 E7EWF7 191 aa29.53■■■□□ 2.32
HDGF-201ENST00000357325 RNF113AO15541 343 aaKnown RBP29.53■■■□□ 2.32
HDGF-201ENST00000357325 RESTQ13127 1097 aa29.53■■■□□ 2.32
HDGF-201ENST00000357325 DHX32Q7L7V1 743 aaKnown RBP29.53■■■□□ 2.32
HDGF-201ENST00000357325 PGBD1Q96JS3 809 aa29.53■■■□□ 2.32
HDGF-201ENST00000357325 CEP126Q9P2H0 1117 aa29.53■■■□□ 2.32
HDGF-201ENST00000357325 CIAO1O76071 339 aa29.52■■■□□ 2.32
HDGF-201ENST00000357325 CKAP2LQ8IYA6 745 aa29.52■■■□□ 2.32
HDGF-201ENST00000357325 DSCC1Q9BVC3 393 aa29.52■■■□□ 2.32
HDGF-201ENST00000357325 GPHNQ9NQX3 736 aaPredicted RBP29.52■■■□□ 2.32
HDGF-201ENST00000357325 DACT1Q9NYF0 836 aa29.52■■■□□ 2.32
HDGF-201ENST00000357325 ELP1O95163 1332 aa29.52■■■□□ 2.32
HDGF-201ENST00000357325 EXOSC10Q01780 885 aaKnown RBP29.52■■■□□ 2.32
HDGF-201ENST00000357325 HLFQ16534 295 aa29.52■■■□□ 2.32
HDGF-201ENST00000357325 XAGE2Q96GT9 111 aa29.52■■■□□ 2.32
HDGF-201ENST00000357325 R3HCC1Q9Y3T6 440 aaKnown RBP29.52■■■□□ 2.32
HDGF-201ENST00000357325 FOXP2O15409 715 aa29.51■■■□□ 2.31
HDGF-201ENST00000357325 GPTP24298 496 aa29.51■■■□□ 2.31
HDGF-201ENST00000357325 KDM4AO75164 1064 aa29.5■■■□□ 2.31
HDGF-201ENST00000357325 FTOQ9C0B1 505 aaKnown RBP eCLIP29.5■■■□□ 2.313e-10■■■□□ 16.9
HDGF-201ENST00000357325 ABCA3Q99758 1704 aa29.5■■■□□ 2.31
HDGF-201ENST00000357325 CEBPZQ03701 1054 aaKnown RBP29.5■■■□□ 2.31
HDGF-201ENST00000357325 NSUN7Q8NE18 718 aaKnown RBP29.5■■■□□ 2.31
HDGF-201ENST00000357325 ATG3Q9NT62 314 aa29.5■■■□□ 2.31
HDGF-201ENST00000357325 PFKFB2O60825 505 aa29.49■■■□□ 2.31
HDGF-201ENST00000357325 TTC12Q9H892 705 aaPredicted RBP29.49■■■□□ 2.31
HDGF-201ENST00000357325 NAP1L2Q9ULW6 460 aaPredicted RBP29.49■■■□□ 2.31
HDGF-201ENST00000357325 SMARCC2Q8TAQ2 1214 aa29.49■■■□□ 2.31
HDGF-201ENST00000357325 HAND2P61296 217 aa29.48■■■□□ 2.31
HDGF-201ENST00000357325 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.48■■■□□ 2.31
HDGF-201ENST00000357325 NUP62CLQ9H1M0 184 aa29.48■■■□□ 2.31
HDGF-201ENST00000357325 H3BQV1 296 aa29.48■■■□□ 2.31
HDGF-201ENST00000357325 IFFO2Q5TF58 517 aa29.48■■■□□ 2.31
HDGF-201ENST00000357325 SCAND2PQ9GZW5 306 aaPredicted RBP29.48■■■□□ 2.31
HDGF-201ENST00000357325 NR1I2O75469 434 aa29.47■■■□□ 2.31
HDGF-201ENST00000357325 ZAP70P43403 619 aa29.47■■■□□ 2.31
HDGF-201ENST00000357325 TTC39AQ5SRH9 613 aa29.47■■■□□ 2.31
HDGF-201ENST00000357325 GORABQ5T7V8 394 aa29.47■■■□□ 2.31
HDGF-201ENST00000357325 C17orf53Q8N3J3 647 aaPredicted RBP29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms