RNA–Protein interactions for RNA: ENST00000357171.7

SHANK2-202, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 1,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-202ENST00000357171 KIF16BQ96L93 1317 aa17.15■□□□□ 0.34
SHANK2-202ENST00000357171 EIF6P56537 245 aaKnown RBP17.15■□□□□ 0.34
SHANK2-202ENST00000357171 WASHC4Q2M389 1173 aa17.15■□□□□ 0.34
SHANK2-202ENST00000357171 RABL6Q3YEC7 729 aaPredicted RBP17.15■□□□□ 0.34
SHANK2-202ENST00000357171 LMBR1LQ6UX01 489 aa17.15■□□□□ 0.34
SHANK2-202ENST00000357171 API5Q9BZZ5 524 aaKnown RBP17.15■□□□□ 0.34
SHANK2-202ENST00000357171 IQCA1LA6NCM1 817 aa17.14■□□□□ 0.33
SHANK2-202ENST00000357171 YDJCA8MPS7 323 aa17.14■□□□□ 0.33
SHANK2-202ENST00000357171 CCT4P50991 539 aaKnown RBP17.14■□□□□ 0.33
SHANK2-202ENST00000357171 CXCL9Q07325 125 aa17.14■□□□□ 0.33
SHANK2-202ENST00000357171 FSTL1Q12841 308 aa17.14■□□□□ 0.33
SHANK2-202ENST00000357171 SUCLG2Q96I99 432 aa17.14■□□□□ 0.33
SHANK2-202ENST00000357171 EYA3Q99504 573 aa17.14■□□□□ 0.33
SHANK2-202ENST00000357171 ANKIB1Q9P2G1 1089 aa17.14■□□□□ 0.33
SHANK2-202ENST00000357171 GGA1Q9UJY5 639 aa17.14■□□□□ 0.33
SHANK2-202ENST00000357171 ZNF646O15015 1829 aaPredicted RBP17.13■□□□□ 0.33
SHANK2-202ENST00000357171 ANKRD18BA2A2Z9 1011 aa17.13■□□□□ 0.33
SHANK2-202ENST00000357171 C6orf229H3BNL8 230 aa17.13■□□□□ 0.33
SHANK2-202ENST00000357171 IGHMBP2P38935 993 aaKnown RBP17.13■□□□□ 0.33
SHANK2-202ENST00000357171 IFIT5Q13325 482 aaKnown RBP17.13■□□□□ 0.33
SHANK2-202ENST00000357171 BCAR3O75815 825 aa17.12■□□□□ 0.33
SHANK2-202ENST00000357171 UFL1O94874 794 aa17.12■□□□□ 0.33
SHANK2-202ENST00000357171 ATP2B4P23634 1241 aa17.12■□□□□ 0.33
SHANK2-202ENST00000357171 SCNN1DP51172 638 aa17.12■□□□□ 0.33
SHANK2-202ENST00000357171 C16orf71Q8IYS4 520 aaPredicted RBP17.12■□□□□ 0.33
SHANK2-202ENST00000357171 TAF1DQ9H5J8 278 aaPredicted RBP17.12■□□□□ 0.33
SHANK2-202ENST00000357171 PCNTO95613 3336 aa17.11■□□□□ 0.33
SHANK2-202ENST00000357171 WTIPA6NIX2 430 aaPredicted RBP17.11■□□□□ 0.33
SHANK2-202ENST00000357171 INTS3Q68E01 1043 aaKnown RBP17.11■□□□□ 0.33
SHANK2-202ENST00000357171 ANKRD44Q8N8A2 993 aa17.11■□□□□ 0.33
SHANK2-202ENST00000357171 MPHOSPH8Q99549 860 aa17.11■□□□□ 0.33
SHANK2-202ENST00000357171 BICC1Q9H694 974 aaKnown RBP17.11■□□□□ 0.33
SHANK2-202ENST00000357171 HACL1Q9UJ83 578 aa17.11■□□□□ 0.33
SHANK2-202ENST00000357171 MED23Q9ULK4 1368 aa17.1■□□□□ 0.33
SHANK2-202ENST00000357171 RIMBP2O15034 1052 aa17.1■□□□□ 0.33
SHANK2-202ENST00000357171 CCDC57Q2TAC2 916 aa17.1■□□□□ 0.33
SHANK2-202ENST00000357171 SMC1BQ8NDV3 1235 aa17.1■□□□□ 0.33
SHANK2-202ENST00000357171 GPR101Q96P66 508 aaPredicted RBP17.1■□□□□ 0.33
SHANK2-202ENST00000357171 ZC3H12CQ9C0D7 883 aaKnown RBP17.1■□□□□ 0.33
SHANK2-202ENST00000357171 LEMD3Q9Y2U8 911 aa17.1■□□□□ 0.33
SHANK2-202ENST00000357171 IPO8O15397 1037 aaKnown RBP17.09■□□□□ 0.33
SHANK2-202ENST00000357171 TRIM27P14373 513 aa17.09■□□□□ 0.33
SHANK2-202ENST00000357171 HSPA6P17066 643 aa17.09■□□□□ 0.33
SHANK2-202ENST00000357171 CHRNDQ07001 517 aa17.09■□□□□ 0.33
SHANK2-202ENST00000357171 CIAPIN1Q6FI81 312 aa17.09■□□□□ 0.33
SHANK2-202ENST00000357171 ANKRD2Q9GZV1 360 aa17.09■□□□□ 0.33
SHANK2-202ENST00000357171 DBNDD1Q9H9R9 158 aa17.09■□□□□ 0.33
SHANK2-202ENST00000357171 GJA3Q9Y6H8 435 aa17.09■□□□□ 0.33
SHANK2-202ENST00000357171 IRS2Q9Y4H2 1338 aa17.09■□□□□ 0.33
SHANK2-202ENST00000357171 ZNF609O15014 1411 aa17.08■□□□□ 0.33
SHANK2-202ENST00000357171 ECE2O60344 883 aa17.08■□□□□ 0.32
SHANK2-202ENST00000357171 EPHX2P34913 555 aa17.08■□□□□ 0.32
SHANK2-202ENST00000357171 TNIP1Q15025 636 aa17.08■□□□□ 0.32
SHANK2-202ENST00000357171 ATF7IPQ6VMQ6 1270 aa17.08■□□□□ 0.32
SHANK2-202ENST00000357171 GPRC5DQ9NZD1 345 aa17.08■□□□□ 0.32
SHANK2-202ENST00000357171 CHMP3Q9Y3E7 222 aa17.08■□□□□ 0.32
SHANK2-202ENST00000357171 RAD17O75943 681 aa17.07■□□□□ 0.32
SHANK2-202ENST00000357171 POTEIP0CG38 1075 aa17.07■□□□□ 0.32
SHANK2-202ENST00000357171 POTEJP0CG39 1038 aa17.07■□□□□ 0.32
SHANK2-202ENST00000357171 DOK7Q18PE1 504 aa17.07■□□□□ 0.32
SHANK2-202ENST00000357171 PNMA8AQ86V59 439 aaPredicted RBP17.07■□□□□ 0.32
SHANK2-202ENST00000357171 ZNF594Q96JF6 807 aaPredicted RBP17.07■□□□□ 0.32
SHANK2-202ENST00000357171 EPS15P42566 896 aa17.06■□□□□ 0.32
SHANK2-202ENST00000357171 LDHAL6AQ6ZMR3 332 aa17.06■□□□□ 0.32
SHANK2-202ENST00000357171 C15orf52Q6ZUT6 534 aaKnown RBP17.06■□□□□ 0.32
SHANK2-202ENST00000357171 LDHDQ86WU2 507 aa17.06■□□□□ 0.32
SHANK2-202ENST00000357171 KCNQ5Q9NR82 932 aa17.06■□□□□ 0.32
SHANK2-202ENST00000357171 ZNF804BA4D1E1 1349 aa17.06■□□□□ 0.32
SHANK2-202ENST00000357171 PSMD14O00487 310 aa17.05■□□□□ 0.32
SHANK2-202ENST00000357171 GMPSP49915 693 aaPredicted RBP17.05■□□□□ 0.32
SHANK2-202ENST00000357171 PODNQ7Z5L7 613 aa17.05■□□□□ 0.32
SHANK2-202ENST00000357171 TXNRD3Q86VQ6 643 aa17.05■□□□□ 0.32
SHANK2-202ENST00000357171 DPF2Q92785 391 aa17.05■□□□□ 0.32
SHANK2-202ENST00000357171 RIPOR2Q9Y4F9 1068 aa17.05■□□□□ 0.32
SHANK2-202ENST00000357171 VIL1P09327 827 aaKnown RBP17.04■□□□□ 0.32
SHANK2-202ENST00000357171 LMOD1P29536 600 aaPredicted RBP17.04■□□□□ 0.32
SHANK2-202ENST00000357171 RFX5P48382 616 aaPredicted RBP17.04■□□□□ 0.32
SHANK2-202ENST00000357171 ZKSCAN2Q63HK3 967 aa17.04■□□□□ 0.32
SHANK2-202ENST00000357171 CHADLQ6NUI6 762 aa17.04■□□□□ 0.32
SHANK2-202ENST00000357171 TNNQ9UQP3 1299 aa17.04■□□□□ 0.32
SHANK2-202ENST00000357171 UBTFL1P0CB47 393 aaPredicted RBP17.03■□□□□ 0.32
SHANK2-202ENST00000357171 RPS12P25398 132 aaKnown RBP17.03■□□□□ 0.32
SHANK2-202ENST00000357171 USP50Q70EL3 339 aaPredicted RBP17.03■□□□□ 0.32
SHANK2-202ENST00000357171 MEIS3Q99687 375 aa17.03■□□□□ 0.32
SHANK2-202ENST00000357171 COA1Q9GZY4 146 aa17.03■□□□□ 0.32
SHANK2-202ENST00000357171 TAF5LO75529 589 aa17.02■□□□□ 0.32
SHANK2-202ENST00000357171 KLRK1P26718 216 aa17.02■□□□□ 0.32
SHANK2-202ENST00000357171 TAF7LQ5H9L4 462 aa17.02■□□□□ 0.32
SHANK2-202ENST00000357171 FRAT1Q92837 279 aaPredicted RBP17.02■□□□□ 0.32
SHANK2-202ENST00000357171 PUS3Q9BZE2 481 aaKnown RBP17.02■□□□□ 0.32
SHANK2-202ENST00000357171 CNNM1Q9NRU3 951 aa17.02■□□□□ 0.32
SHANK2-202ENST00000357171 ADARB2Q9NS39 739 aaKnown RBP17.02■□□□□ 0.32
SHANK2-202ENST00000357171 HDAC5Q9UQL6 1122 aa17.02■□□□□ 0.32
SHANK2-202ENST00000357171 POLR2AP24928 1970 aaKnown RBP17.02■□□□□ 0.31
SHANK2-202ENST00000357171 PASKQ96RG2 1323 aa17.02■□□□□ 0.31
SHANK2-202ENST00000357171 SNAP23O00161 211 aa17.02■□□□□ 0.31
SHANK2-202ENST00000357171 ITGBL1O95965 494 aaPredicted RBP17.02■□□□□ 0.31
SHANK2-202ENST00000357171 APLP1P51693 650 aa17.02■□□□□ 0.31
SHANK2-202ENST00000357171 VGLL2Q8N8G2 317 aa17.02■□□□□ 0.31
SHANK2-202ENST00000357171 HELBQ8NG08 1087 aaPredicted RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms