RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 NPR1P16066 1061 aa5.02□□□□□ -1.61
LIG4-201ENST00000356922 GPSM2P81274 684 aa5.02□□□□□ -1.61
LIG4-201ENST00000356922 TSHZ3Q63HK5 1081 aa5.02□□□□□ -1.61
LIG4-201ENST00000356922 DDX46Q7L014 1031 aaKnown RBP5.02□□□□□ -1.61
LIG4-201ENST00000356922 RPGRQ92834 1020 aaKnown RBP5.02□□□□□ -1.61
LIG4-201ENST00000356922 KCNQ5Q9NR82 932 aa5.02□□□□□ -1.61
LIG4-201ENST00000356922 SPEF2Q9C093 1822 aa5.02□□□□□ -1.61
LIG4-201ENST00000356922 ANKRD18BA2A2Z9 1011 aa5.02□□□□□ -1.61
LIG4-201ENST00000356922 TGFB2P61812 414 aa5.02□□□□□ -1.61
LIG4-201ENST00000356922 CHRNDQ07001 517 aa5.02□□□□□ -1.61
LIG4-201ENST00000356922 HDAC1Q13547 482 aaPredicted RBP5.02□□□□□ -1.61
LIG4-201ENST00000356922 EAF2Q96CJ1 260 aaPredicted RBP5.02□□□□□ -1.61
LIG4-201ENST00000356922 CRAMP1Q96RY5 1269 aa5.02□□□□□ -1.61
LIG4-201ENST00000356922 NOP58Q9Y2X3 529 aaKnown RBP5.02□□□□□ -1.61
LIG4-201ENST00000356922 BRCA1P38398 1863 aaKnown RBP5.01□□□□□ -1.61
LIG4-201ENST00000356922 EYA2O00167 538 aa5.01□□□□□ -1.61
LIG4-201ENST00000356922 ADORA1P30542 326 aa5.01□□□□□ -1.61
LIG4-201ENST00000356922 BSDC1Q9NW68 430 aaPredicted RBP5.01□□□□□ -1.61
LIG4-201ENST00000356922 NSFL1CQ9UNZ2 370 aaKnown RBP5.01□□□□□ -1.61
LIG4-201ENST00000356922 BCS1LQ9Y276 419 aa5.01□□□□□ -1.61
LIG4-201ENST00000356922 NDUFB9Q9Y6M9 179 aa5.01□□□□□ -1.61
LIG4-201ENST00000356922 RIC1Q4ADV7 1423 aa5.01□□□□□ -1.61
LIG4-201ENST00000356922 NEFLP07196 543 aa5.01□□□□□ -1.61
LIG4-201ENST00000356922 PDE4AP27815 886 aa5.01□□□□□ -1.61
LIG4-201ENST00000356922 ANKRD18AQ8IVF6 992 aa5.01□□□□□ -1.61
LIG4-201ENST00000356922 TTLL6Q8N841 843 aa5.01□□□□□ -1.61
LIG4-201ENST00000356922 PIM2Q9P1W9 311 aa5.01□□□□□ -1.61
LIG4-201ENST00000356922 COL4A5P29400 1685 aa5.01□□□□□ -1.61
LIG4-201ENST00000356922 RTL9Q8NET4 1388 aa5.01□□□□□ -1.61
LIG4-201ENST00000356922 IRS2Q9Y4H2 1338 aa5.01□□□□□ -1.61
LIG4-201ENST00000356922 NFKBIEO00221 500 aa5.01□□□□□ -1.61
LIG4-201ENST00000356922 STYK1Q6J9G0 422 aa5.01□□□□□ -1.61
LIG4-201ENST00000356922 SMC5Q8IY18 1101 aa5.01□□□□□ -1.61
LIG4-201ENST00000356922 RBM17Q96I25 401 aaKnown RBP5.01□□□□□ -1.61
LIG4-201ENST00000356922 CCDC8Q9H0W5 538 aaPredicted RBP5.01□□□□□ -1.61
LIG4-201ENST00000356922 ATP6V0A2Q9Y487 856 aa5.01□□□□□ -1.61
LIG4-201ENST00000356922 CENPFP49454 3210 aa5□□□□□ -1.61
LIG4-201ENST00000356922 PPEF1O14829 653 aaPredicted RBP5□□□□□ -1.61
LIG4-201ENST00000356922 CHGBP05060 677 aa5□□□□□ -1.61
LIG4-201ENST00000356922 RHPN1Q8TCX5 695 aa5□□□□□ -1.61
LIG4-201ENST00000356922 MPHOSPH8Q99549 860 aa5□□□□□ -1.61
LIG4-201ENST00000356922 CNNM1Q9NRU3 951 aa5□□□□□ -1.61
LIG4-201ENST00000356922 DUOX1Q9NRD9 1551 aa5□□□□□ -1.61
LIG4-201ENST00000356922 BBOX1O75936 387 aa5□□□□□ -1.61
LIG4-201ENST00000356922 PDE8BO95263 885 aa5□□□□□ -1.61
LIG4-201ENST00000356922 FGFR2P21802 821 aa5□□□□□ -1.61
LIG4-201ENST00000356922 ANKRD45Q5TZF3 282 aa5□□□□□ -1.61
LIG4-201ENST00000356922 PI16Q6UXB8 463 aa5□□□□□ -1.61
LIG4-201ENST00000356922 LNPKQ9C0E8 428 aa5□□□□□ -1.61
LIG4-201ENST00000356922 RIMBP2O15034 1052 aa5□□□□□ -1.61
LIG4-201ENST00000356922 ALDH1B1P30837 517 aa5□□□□□ -1.61
LIG4-201ENST00000356922 GYG1P46976 350 aa5□□□□□ -1.61
LIG4-201ENST00000356922 RASSF7Q02833 373 aa5□□□□□ -1.61
LIG4-201ENST00000356922 SCARF1Q14162 830 aa5□□□□□ -1.61
LIG4-201ENST00000356922 SP8Q8IXZ3 490 aa5□□□□□ -1.61
LIG4-201ENST00000356922 TBC1D16Q8TBP0 767 aa5□□□□□ -1.61
LIG4-201ENST00000356922 CCDC136Q96JN2 1154 aa5□□□□□ -1.61
LIG4-201ENST00000356922 DBNDD2Q9BQY9 259 aa5□□□□□ -1.61
LIG4-201ENST00000356922 PPP4R2Q9NY27 417 aa5□□□□□ -1.61
LIG4-201ENST00000356922 DBNLQ9UJU6 430 aaKnown RBP5□□□□□ -1.61
LIG4-201ENST00000356922 IQSEC3Q9UPP2 1182 aaPredicted RBP5□□□□□ -1.61
LIG4-201ENST00000356922 BCAMP50895 628 aa4.99□□□□□ -1.61
LIG4-201ENST00000356922 DALRD3Q5D0E6 543 aaKnown RBP4.99□□□□□ -1.61
LIG4-201ENST00000356922 TAF7LQ5H9L4 462 aa4.99□□□□□ -1.61
LIG4-201ENST00000356922 ZNF277Q9NRM2 450 aaPredicted RBP4.99□□□□□ -1.61
LIG4-201ENST00000356922 PDZRN3Q9UPQ7 1066 aa4.99□□□□□ -1.61
LIG4-201ENST00000356922 JAG2Q9Y219 1238 aa4.99□□□□□ -1.61
LIG4-201ENST00000356922 LRP5O75197 1615 aa4.99□□□□□ -1.61
LIG4-201ENST00000356922 LTBP1Q14766 1721 aa4.99□□□□□ -1.61
LIG4-201ENST00000356922 IGHMBP2P38935 993 aaKnown RBP4.99□□□□□ -1.61
LIG4-201ENST00000356922 METTL24Q5JXM2 366 aa4.99□□□□□ -1.61
LIG4-201ENST00000356922 EDC3Q96F86 508 aaKnown RBP4.99□□□□□ -1.61
LIG4-201ENST00000356922 CDC5LQ99459 802 aaKnown RBP4.99□□□□□ -1.61
LIG4-201ENST00000356922 ANKIB1Q9P2G1 1089 aa4.99□□□□□ -1.61
LIG4-201ENST00000356922 DLEC1Q9Y238 1755 aa4.99□□□□□ -1.61
LIG4-201ENST00000356922 CHD4Q14839 1912 aa4.99□□□□□ -1.61
LIG4-201ENST00000356922 A0A1B0GUL7 405 aa4.99□□□□□ -1.61
LIG4-201ENST00000356922 NUCB1Q02818 461 aa4.99□□□□□ -1.61
LIG4-201ENST00000356922 G3BP1Q13283 466 aaKnown RBP eCLIP4.99□□□□□ -1.61
LIG4-201ENST00000356922 DOK7Q18PE1 504 aa4.99□□□□□ -1.61
LIG4-201ENST00000356922 SLFNL1Q499Z3 407 aa4.99□□□□□ -1.61
LIG4-201ENST00000356922 CNKSR1Q969H4 720 aa4.99□□□□□ -1.61
LIG4-201ENST00000356922 FAM84BQ96KN1 310 aaPredicted RBP4.99□□□□□ -1.61
LIG4-201ENST00000356922 MXD3Q9BW11 206 aa4.99□□□□□ -1.61
LIG4-201ENST00000356922 RWDD1Q9H446 243 aaPredicted RBP4.99□□□□□ -1.61
LIG4-201ENST00000356922 CIAO1O76071 339 aa4.98□□□□□ -1.61
LIG4-201ENST00000356922 IL15P40933 162 aaPredicted RBP4.98□□□□□ -1.61
LIG4-201ENST00000356922 GRIK5Q16478 980 aa4.98□□□□□ -1.61
LIG4-201ENST00000356922 TNNI3KQ59H18 835 aa4.98□□□□□ -1.61
LIG4-201ENST00000356922 NEUROD6Q96NK8 337 aa4.98□□□□□ -1.61
LIG4-201ENST00000356922 FPGT-TNNI3KV9GXZ4 949 aa4.98□□□□□ -1.61
LIG4-201ENST00000356922 SALL3Q9BXA9 1300 aa4.98□□□□□ -1.61
LIG4-201ENST00000356922 PHKA1P46020 1223 aa4.98□□□□□ -1.61
LIG4-201ENST00000356922 AOC3Q16853 763 aa4.98□□□□□ -1.61
LIG4-201ENST00000356922 MPNDQ8N594 471 aa4.98□□□□□ -1.61
LIG4-201ENST00000356922 XAGE2Q96GT9 111 aa4.98□□□□□ -1.61
LIG4-201ENST00000356922 PODXL2Q9NZ53 605 aa4.98□□□□□ -1.61
LIG4-201ENST00000356922 A0A1B0GUL6 1792 aa4.98□□□□□ -1.61
LIG4-201ENST00000356922 ZNF804BA4D1E1 1349 aa4.98□□□□□ -1.61
LIG4-201ENST00000356922 YDJCA8MPS7 323 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms