RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 ZSCAN22P10073 491 aaPredicted RBP18.3■□□□□ 0.52
RXRA-201ENST00000356384 DDX46Q7L014 1031 aaKnown RBP18.3■□□□□ 0.52
RXRA-201ENST00000356384 CCDC77Q9BR77 488 aa18.3■□□□□ 0.52
RXRA-201ENST00000356384 KLHL40Q2TBA0 621 aa18.29■□□□□ 0.52
RXRA-201ENST00000356384 LRRC2Q9BYS8 371 aa18.29■□□□□ 0.52
RXRA-201ENST00000356384 GSTA5Q7RTV2 222 aa18.29■□□□□ 0.52
RXRA-201ENST00000356384 LRRC45Q96CN5 670 aa18.29■□□□□ 0.52
RXRA-201ENST00000356384 UTP14AQ9BVJ6 771 aaKnown RBP18.29■□□□□ 0.52
RXRA-201ENST00000356384 CTTNBP2Q8WZ74 1663 aa18.29■□□□□ 0.52
RXRA-201ENST00000356384 TMEM110-MUSTN1A8MSY1 372 aa18.29■□□□□ 0.52
RXRA-201ENST00000356384 NDC80O14777 642 aa18.29■□□□□ 0.52
RXRA-201ENST00000356384 CRNKL1Q9BZJ0 848 aaKnown RBP18.29■□□□□ 0.52
RXRA-201ENST00000356384 LRSAM1Q6UWE0 723 aa18.29■□□□□ 0.52
RXRA-201ENST00000356384 WWC3Q9ULE0 1092 aa18.29■□□□□ 0.52
RXRA-201ENST00000356384 ABCC5O15440 1437 aa18.29■□□□□ 0.52
RXRA-201ENST00000356384 BMP2KLQ5H9B9 411 aa18.28■□□□□ 0.52
RXRA-201ENST00000356384 TTC22Q5TAA0 569 aa18.28■□□□□ 0.52
RXRA-201ENST00000356384 ALG1Q9BT22 464 aa18.28■□□□□ 0.52
RXRA-201ENST00000356384 THOC2Q8NI27 1593 aaKnown RBP18.28■□□□□ 0.52
RXRA-201ENST00000356384 DAAM2Q86T65 1068 aa18.28■□□□□ 0.52
RXRA-201ENST00000356384 CNPY2Q9Y2B0 182 aa18.28■□□□□ 0.52
RXRA-201ENST00000356384 PSMC4P43686 418 aa18.28■□□□□ 0.52
RXRA-201ENST00000356384 ARID5AQ03989 594 aa18.28■□□□□ 0.52
RXRA-201ENST00000356384 USP37Q86T82 979 aa18.28■□□□□ 0.52
RXRA-201ENST00000356384 SELENOSQ9BQE4 189 aa18.28■□□□□ 0.52
RXRA-201ENST00000356384 TSPY3P0CV98 308 aa18.28■□□□□ 0.52
RXRA-201ENST00000356384 TSPY8P0CW00 308 aa18.28■□□□□ 0.52
RXRA-201ENST00000356384 ZBTB16Q05516 673 aa18.28■□□□□ 0.52
RXRA-201ENST00000356384 GRM1Q13255 1194 aa18.28■□□□□ 0.52
RXRA-201ENST00000356384 CCDC186Q7Z3E2 898 aa18.28■□□□□ 0.52
RXRA-201ENST00000356384 TMX3Q96JJ7 454 aa18.28■□□□□ 0.52
RXRA-201ENST00000356384 HEATR3Q7Z4Q2 680 aa18.27■□□□□ 0.52
RXRA-201ENST00000356384 ZBTB43O43298 467 aa18.27■□□□□ 0.52
RXRA-201ENST00000356384 TACC1O75410 805 aa18.27■□□□□ 0.52
RXRA-201ENST00000356384 SMC6Q96SB8 1091 aa18.27■□□□□ 0.52
RXRA-201ENST00000356384 EEF2P13639 858 aaKnown RBP18.27■□□□□ 0.52
RXRA-201ENST00000356384 CCDC141Q6ZP82 1450 aa18.27■□□□□ 0.51
RXRA-201ENST00000356384 OPA1O60313 960 aa18.27■□□□□ 0.51
RXRA-201ENST00000356384 IFIT1BQ5T764 474 aaKnown RBP18.27■□□□□ 0.51
RXRA-201ENST00000356384 AOPEPQ8N6M6 819 aa18.27■□□□□ 0.51
RXRA-201ENST00000356384 ZBTB9Q96C00 473 aa18.27■□□□□ 0.51
RXRA-201ENST00000356384 ASIC1P78348 528 aa18.26■□□□□ 0.51
RXRA-201ENST00000356384 TCEANC2Q96MN5 208 aa18.26■□□□□ 0.51
RXRA-201ENST00000356384 MPHOSPH6Q99547 160 aaKnown RBP18.26■□□□□ 0.51
RXRA-201ENST00000356384 LRPPRCP42704 1394 aaKnown RBP18.26■□□□□ 0.51
RXRA-201ENST00000356384 MARCKSP29966 332 aaPredicted RBP18.26■□□□□ 0.51
RXRA-201ENST00000356384 TTC12Q9H892 705 aaPredicted RBP18.26■□□□□ 0.51
RXRA-201ENST00000356384 ADAMTS12P58397 1594 aa18.26■□□□□ 0.51
RXRA-201ENST00000356384 PI4KAP2A4QPH2 592 aa18.26■□□□□ 0.51
RXRA-201ENST00000356384 NOLC1Q14978 699 aaKnown RBP eCLIP18.26■□□□□ 0.51
RXRA-201ENST00000356384 PI4KAP1Q8N8J0 262 aa18.26■□□□□ 0.51
RXRA-201ENST00000356384 KCNG4Q8TDN1 519 aa18.26■□□□□ 0.51
RXRA-201ENST00000356384 IVLP07476 585 aa18.25■□□□□ 0.51
RXRA-201ENST00000356384 PRPHP41219 470 aa18.25■□□□□ 0.51
RXRA-201ENST00000356384 PLCB3Q01970 1234 aa18.25■□□□□ 0.51
RXRA-201ENST00000356384 ZNF622Q969S3 477 aaKnown RBP eCLIP18.25■□□□□ 0.51
RXRA-201ENST00000356384 SPAG1Q07617 926 aa18.25■□□□□ 0.51
RXRA-201ENST00000356384 DPH6Q7L8W6 267 aa18.25■□□□□ 0.51
RXRA-201ENST00000356384 PSMA7O14818 248 aa18.25■□□□□ 0.51
RXRA-201ENST00000356384 MRPS27Q92552 414 aaKnown RBP18.25■□□□□ 0.51
RXRA-201ENST00000356384 KRT23Q9C075 422 aa18.25■□□□□ 0.51
RXRA-201ENST00000356384 SMIM23A6NLE4 172 aa18.25■□□□□ 0.51
RXRA-201ENST00000356384 EXOC5O00471 708 aa18.25■□□□□ 0.51
RXRA-201ENST00000356384 ATP2A1O14983 1001 aa18.25■□□□□ 0.51
RXRA-201ENST00000356384 GTF2A1P52655 376 aaPredicted RBP18.25■□□□□ 0.51
RXRA-201ENST00000356384 CCDC50Q8IVM0 306 aa18.25■□□□□ 0.51
RXRA-201ENST00000356384 ANKS4BQ8N8V4 417 aa18.25■□□□□ 0.51
RXRA-201ENST00000356384 STMN4Q9H169 189 aaPredicted RBP18.25■□□□□ 0.51
RXRA-201ENST00000356384 BMP15O95972 392 aa18.25■□□□□ 0.51
RXRA-201ENST00000356384 RTN1Q16799 776 aa18.25■□□□□ 0.51
RXRA-201ENST00000356384 SYT1P21579 422 aa18.24■□□□□ 0.51
RXRA-201ENST00000356384 CAPZA3Q96KX2 299 aa18.24■□□□□ 0.51
RXRA-201ENST00000356384 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.24■□□□□ 0.51
RXRA-201ENST00000356384 V9GYY5 206 aaPredicted RBP18.24■□□□□ 0.51
RXRA-201ENST00000356384 CTAGE9A4FU28 777 aa18.24■□□□□ 0.51
RXRA-201ENST00000356384 UQCRFS1P1P0C7P4 283 aa18.24■□□□□ 0.51
RXRA-201ENST00000356384 DNAJC25Q9H1X3 360 aa18.24■□□□□ 0.51
RXRA-201ENST00000356384 PHF8Q9UPP1 1060 aa18.24■□□□□ 0.51
RXRA-201ENST00000356384 FBXO31Q5XUX0 539 aaPredicted RBP18.24■□□□□ 0.51
RXRA-201ENST00000356384 RAPGEF6Q8TEU7 1601 aa18.24■□□□□ 0.51
RXRA-201ENST00000356384 GSTO1P78417 241 aa18.24■□□□□ 0.51
RXRA-201ENST00000356384 CCDC129Q6ZRS4 1044 aa18.24■□□□□ 0.51
RXRA-201ENST00000356384 USP48Q86UV5 1035 aa18.24■□□□□ 0.51
RXRA-201ENST00000356384 AMOTL2Q9Y2J4 779 aa18.24■□□□□ 0.51
RXRA-201ENST00000356384 SLC4A4Q9Y6R1 1079 aa18.24■□□□□ 0.51
RXRA-201ENST00000356384 CD109Q6YHK3 1445 aa18.23■□□□□ 0.51
RXRA-201ENST00000356384 CYP7A1P22680 504 aa18.23■□□□□ 0.51
RXRA-201ENST00000356384 MAP7D1Q3KQU3 841 aa18.23■□□□□ 0.51
RXRA-201ENST00000356384 CCDC121Q6ZUS5 278 aa18.23■□□□□ 0.51
RXRA-201ENST00000356384 MICALL1Q8N3F8 863 aa18.23■□□□□ 0.51
RXRA-201ENST00000356384 ANAPC4Q9UJX5 808 aa18.23■□□□□ 0.51
RXRA-201ENST00000356384 DHX58Q96C10 678 aa18.23■□□□□ 0.51
RXRA-201ENST00000356384 TTC14Q96N46 770 aa18.23■□□□□ 0.51
RXRA-201ENST00000356384 TCHPQ9BT92 498 aa18.23■□□□□ 0.51
RXRA-201ENST00000356384 FAM200AQ8TCP9 573 aa18.23■□□□□ 0.51
RXRA-201ENST00000356384 IMPG2Q9BZV3 1241 aa18.23■□□□□ 0.51
RXRA-201ENST00000356384 CHRNA2Q15822 529 aa18.22■□□□□ 0.51
RXRA-201ENST00000356384 ESR2Q92731 530 aa18.22■□□□□ 0.51
RXRA-201ENST00000356384 DACT1Q9NYF0 836 aa18.22■□□□□ 0.51
RXRA-201ENST00000356384 CEP57Q86XR8 500 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms