RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.89□□□□□ -0.51
PTPRA-203ENST00000356147 GPHNQ9NQX3 736 aaPredicted RBP11.89□□□□□ -0.51
PTPRA-203ENST00000356147 GIGYF1O75420 1035 aaPredicted RBP11.89□□□□□ -0.51
PTPRA-203ENST00000356147 IGKV5-2P06315 115 aa11.89□□□□□ -0.51
PTPRA-203ENST00000356147 ADD1P35611 737 aaKnown RBP11.89□□□□□ -0.51
PTPRA-203ENST00000356147 TFCP2Q12800 502 aa11.89□□□□□ -0.51
PTPRA-203ENST00000356147 STX1AQ16623 288 aa11.89□□□□□ -0.51
PTPRA-203ENST00000356147 SDF4Q9BRK5 362 aa11.89□□□□□ -0.51
PTPRA-203ENST00000356147 FMN2Q9NZ56 1722 aa11.88□□□□□ -0.51
PTPRA-203ENST00000356147 RGPD8O14715 1765 aaPredicted RBP11.88□□□□□ -0.51
PTPRA-203ENST00000356147 PTPDC1A2A3K4 754 aa11.88□□□□□ -0.51
PTPRA-203ENST00000356147 POLR3DP05423 398 aaPredicted RBP11.88□□□□□ -0.51
PTPRA-203ENST00000356147 RBM6P78332 1123 aaKnown RBP11.88□□□□□ -0.51
PTPRA-203ENST00000356147 SYT10Q6XYQ8 523 aa11.88□□□□□ -0.51
PTPRA-203ENST00000356147 DBNDD2Q9BQY9 259 aa11.88□□□□□ -0.51
PTPRA-203ENST00000356147 MED23Q9ULK4 1368 aa11.88□□□□□ -0.51
PTPRA-203ENST00000356147 HIP1O00291 1037 aa11.88□□□□□ -0.51
PTPRA-203ENST00000356147 CTDNEP1O95476 244 aa11.88□□□□□ -0.51
PTPRA-203ENST00000356147 SNW1Q13573 536 aaKnown RBP11.88□□□□□ -0.51
PTPRA-203ENST00000356147 CCAR2Q8N163 923 aaKnown RBP11.88□□□□□ -0.51
PTPRA-203ENST00000356147 MYD88Q99836 296 aa11.88□□□□□ -0.51
PTPRA-203ENST00000356147 CFAP45Q9UL16 551 aa11.88□□□□□ -0.51
PTPRA-203ENST00000356147 GOLGA8FQ08AF8 430 aa11.87□□□□□ -0.51
PTPRA-203ENST00000356147 GOLGA8DPQ0D2H9 430 aa11.87□□□□□ -0.51
PTPRA-203ENST00000356147 TMC6Q7Z403 805 aa11.87□□□□□ -0.51
PTPRA-203ENST00000356147 TMX1Q9H3N1 280 aa11.87□□□□□ -0.51
PTPRA-203ENST00000356147 NALCNQ8IZF0 1738 aa11.87□□□□□ -0.51
PTPRA-203ENST00000356147 NWD1Q149M9 1564 aa11.87□□□□□ -0.51
PTPRA-203ENST00000356147 ATP5J2-PTCD1G3V325 749 aa11.87□□□□□ -0.51
PTPRA-203ENST00000356147 PTCD1O75127 700 aaKnown RBP11.87□□□□□ -0.51
PTPRA-203ENST00000356147 DPCR1Q3MIW9 517 aa11.87□□□□□ -0.51
PTPRA-203ENST00000356147 NYAP1Q6ZVC0 841 aa11.87□□□□□ -0.51
PTPRA-203ENST00000356147 FAM177A1Q8N128 213 aaPredicted RBP11.87□□□□□ -0.51
PTPRA-203ENST00000356147 NSUN7Q8NE18 718 aaKnown RBP11.87□□□□□ -0.51
PTPRA-203ENST00000356147 ZNF397Q8NF99 534 aaPredicted RBP11.87□□□□□ -0.51
PTPRA-203ENST00000356147 LINS1Q8NG48 757 aa11.87□□□□□ -0.51
PTPRA-203ENST00000356147 ERBB3P21860 1342 aa11.87□□□□□ -0.51
PTPRA-203ENST00000356147 CEMIPQ8WUJ3 1361 aa11.87□□□□□ -0.51
PTPRA-203ENST00000356147 ALDH1L1O75891 902 aa11.86□□□□□ -0.51
PTPRA-203ENST00000356147 KRT222Q8N1A0 295 aa11.86□□□□□ -0.51
PTPRA-203ENST00000356147 ZNF446Q9NWS9 450 aa11.86□□□□□ -0.51
PTPRA-203ENST00000356147 IFNKQ9P0W0 207 aa11.86□□□□□ -0.51
PTPRA-203ENST00000356147 MORC2Q9Y6X9 1032 aaPredicted RBP11.86□□□□□ -0.51
PTPRA-203ENST00000356147 TERF2Q15554 542 aa11.86□□□□□ -0.51
PTPRA-203ENST00000356147 HSP90AA4PQ58FG1 418 aa11.86□□□□□ -0.51
PTPRA-203ENST00000356147 NBPF11Q86T75 865 aa11.86□□□□□ -0.51
PTPRA-203ENST00000356147 NEUROD6Q96NK8 337 aa11.86□□□□□ -0.51
PTPRA-203ENST00000356147 XPO4Q9C0E2 1151 aaKnown RBP11.86□□□□□ -0.51
PTPRA-203ENST00000356147 EPC1Q9H2F5 836 aa11.86□□□□□ -0.51
PTPRA-203ENST00000356147 KCNA6P17658 529 aa11.86□□□□□ -0.51
PTPRA-203ENST00000356147 C1orf141Q5JVX7 400 aa11.86□□□□□ -0.51
PTPRA-203ENST00000356147 MRFAP1L1Q96HT8 127 aa11.86□□□□□ -0.51
PTPRA-203ENST00000356147 ZNF609O15014 1411 aa11.85□□□□□ -0.51
PTPRA-203ENST00000356147 VGLL3A8MV65 326 aa11.85□□□□□ -0.51
PTPRA-203ENST00000356147 RNMTO43148 476 aaKnown RBP11.85□□□□□ -0.51
PTPRA-203ENST00000356147 E4F1Q66K89 784 aaPredicted RBP11.85□□□□□ -0.51
PTPRA-203ENST00000356147 TTLL5Q6EMB2 1281 aa11.85□□□□□ -0.51
PTPRA-203ENST00000356147 UBE3BQ7Z3V4 1068 aa11.85□□□□□ -0.51
PTPRA-203ENST00000356147 BABAM1Q9NWV8 329 aa11.85□□□□□ -0.51
PTPRA-203ENST00000356147 GOLIM4O00461 696 aa11.85□□□□□ -0.51
PTPRA-203ENST00000356147 SLU7O95391 586 aaKnown RBP11.85□□□□□ -0.51
PTPRA-203ENST00000356147 LMOD1P29536 600 aaPredicted RBP11.85□□□□□ -0.51
PTPRA-203ENST00000356147 NDUFA8P51970 172 aa11.85□□□□□ -0.51
PTPRA-203ENST00000356147 HAND2P61296 217 aa11.85□□□□□ -0.51
PTPRA-203ENST00000356147 COPS6Q7L5N1 327 aa11.85□□□□□ -0.51
PTPRA-203ENST00000356147 ILDR1Q86SU0 546 aaPredicted RBP11.85□□□□□ -0.51
PTPRA-203ENST00000356147 CEP57L1Q8IYX8 460 aa11.85□□□□□ -0.51
PTPRA-203ENST00000356147 XAGE3Q8WTP9 111 aa11.85□□□□□ -0.51
PTPRA-203ENST00000356147 ANO10Q9NW15 660 aa11.85□□□□□ -0.51
PTPRA-203ENST00000356147 PCDHA7Q9UN72 937 aa11.85□□□□□ -0.51
PTPRA-203ENST00000356147 EID1Q9Y6B2 187 aa11.85□□□□□ -0.51
PTPRA-203ENST00000356147 PIK3C2AO00443 1686 aa11.85□□□□□ -0.51
PTPRA-203ENST00000356147 LRRC37A3O60309 1634 aa11.85□□□□□ -0.51
PTPRA-203ENST00000356147 SF3A1Q15459 793 aaKnown RBP11.84□□□□□ -0.51
PTPRA-203ENST00000356147 HSP90AB3PQ58FF7 597 aa11.84□□□□□ -0.51
PTPRA-203ENST00000356147 HOMER1Q86YM7 354 aa11.84□□□□□ -0.51
PTPRA-203ENST00000356147 BBXQ8WY36 941 aaPredicted RBP11.84□□□□□ -0.51
PTPRA-203ENST00000356147 ZSCAN16Q9H4T2 348 aaPredicted RBP11.84□□□□□ -0.51
PTPRA-203ENST00000356147 HMG20BQ9P0W2 317 aa11.84□□□□□ -0.51
PTPRA-203ENST00000356147 RCOR1Q9UKL0 485 aa11.84□□□□□ -0.51
PTPRA-203ENST00000356147 TNNI3KQ59H18 835 aa11.84□□□□□ -0.51
PTPRA-203ENST00000356147 ARMCX5Q6P1M9 558 aa11.84□□□□□ -0.51
PTPRA-203ENST00000356147 SARM1Q6SZW1 724 aa11.84□□□□□ -0.51
PTPRA-203ENST00000356147 FPGT-TNNI3KV9GXZ4 949 aa11.84□□□□□ -0.51
PTPRA-203ENST00000356147 CACNA1FO60840 1977 aa11.84□□□□□ -0.51
PTPRA-203ENST00000356147 CDC25BP30305 580 aa11.84□□□□□ -0.51
PTPRA-203ENST00000356147 FAM160A1Q05DH4 1040 aa11.84□□□□□ -0.51
PTPRA-203ENST00000356147 SYCP1Q15431 976 aa11.84□□□□□ -0.51
PTPRA-203ENST00000356147 AKAP4Q5JQC9 854 aa11.84□□□□□ -0.51
PTPRA-203ENST00000356147 ENGASEQ8NFI3 743 aa11.84□□□□□ -0.51
PTPRA-203ENST00000356147 CLIC4Q9Y696 253 aa11.84□□□□□ -0.51
PTPRA-203ENST00000356147 POLR3GO15318 223 aaPredicted RBP11.83□□□□□ -0.52
PTPRA-203ENST00000356147 ATP1A3P13637 1013 aa11.83□□□□□ -0.52
PTPRA-203ENST00000356147 TIMM10P62072 90 aa11.83□□□□□ -0.52
PTPRA-203ENST00000356147 GABPB1Q06547 395 aaPredicted RBP11.83□□□□□ -0.52
PTPRA-203ENST00000356147 ZRSR1Q15695 479 aaKnown RBP11.83□□□□□ -0.52
PTPRA-203ENST00000356147 PLEKHO1Q53GL0 409 aaPredicted RBP11.83□□□□□ -0.52
PTPRA-203ENST00000356147 IP6K1Q92551 441 aa11.83□□□□□ -0.52
PTPRA-203ENST00000356147 ERO1AQ96HE7 468 aa11.83□□□□□ -0.52
PTPRA-203ENST00000356147 PPP1R13BQ96KQ4 1090 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms