RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 CCDC170Q8IYT3 715 aa19.57■□□□□ 0.72
COL27A1-201ENST00000356083 GNG11P61952 73 aa19.57■□□□□ 0.72
COL27A1-201ENST00000356083 SNW1Q13573 536 aaKnown RBP19.57■□□□□ 0.72
COL27A1-201ENST00000356083 DDX12PQ92771 950 aa19.57■□□□□ 0.72
COL27A1-201ENST00000356083 C8orf37Q96NL8 207 aa19.57■□□□□ 0.72
COL27A1-201ENST00000356083 ANKS4BQ8N8V4 417 aa19.57■□□□□ 0.72
COL27A1-201ENST00000356083 FYCO1Q9BQS8 1478 aa19.57■□□□□ 0.72
COL27A1-201ENST00000356083 SEPT6Q14141 434 aa19.57■□□□□ 0.72
COL27A1-201ENST00000356083 BANK1Q8NDB2 785 aa19.57■□□□□ 0.72
COL27A1-201ENST00000356083 C4orf50Q6ZRC1 276 aa19.56■□□□□ 0.72
COL27A1-201ENST00000356083 PPP1R42Q7Z4L9 355 aa19.56■□□□□ 0.72
COL27A1-201ENST00000356083 CAPZA3Q96KX2 299 aa19.56■□□□□ 0.72
COL27A1-201ENST00000356083 MAP3K2Q9Y2U5 619 aa19.56■□□□□ 0.72
COL27A1-201ENST00000356083 MX1P20591 662 aa19.56■□□□□ 0.72
COL27A1-201ENST00000356083 PPP1R7Q15435 360 aa19.56■□□□□ 0.72
COL27A1-201ENST00000356083 ABL1P00519 1130 aa19.56■□□□□ 0.72
COL27A1-201ENST00000356083 SEC62Q99442 399 aaKnown RBP19.56■□□□□ 0.72
COL27A1-201ENST00000356083 USP25Q9UHP3 1055 aa19.56■□□□□ 0.72
COL27A1-201ENST00000356083 KIF2AO00139 706 aaPredicted RBP19.55■□□□□ 0.72
COL27A1-201ENST00000356083 MSL1Q68DK7 614 aa19.55■□□□□ 0.72
COL27A1-201ENST00000356083 NSRP1Q9H0G5 558 aaKnown RBP19.55■□□□□ 0.72
COL27A1-201ENST00000356083 TLDC2A0PJX2 215 aa19.55■□□□□ 0.72
COL27A1-201ENST00000356083 LRRC2Q9BYS8 371 aa19.55■□□□□ 0.72
COL27A1-201ENST00000356083 NAPAP54920 295 aa19.55■□□□□ 0.72
COL27A1-201ENST00000356083 DCAF17Q5H9S7 520 aaPredicted RBP19.55■□□□□ 0.72
COL27A1-201ENST00000356083 DACT3Q96B18 629 aaPredicted RBP19.55■□□□□ 0.72
COL27A1-201ENST00000356083 FAM184BQ9ULE4 1060 aa19.55■□□□□ 0.72
COL27A1-201ENST00000356083 UBASH3AP57075 661 aa19.55■□□□□ 0.72
COL27A1-201ENST00000356083 SCAND2PQ9GZW5 306 aaPredicted RBP19.55■□□□□ 0.72
COL27A1-201ENST00000356083 ATP6V0A2Q9Y487 856 aa19.55■□□□□ 0.72
COL27A1-201ENST00000356083 RRAGBQ5VZM2 374 aa19.54■□□□□ 0.72
COL27A1-201ENST00000356083 WTAPQ15007 396 aa19.54■□□□□ 0.72
COL27A1-201ENST00000356083 GTF3C6Q969F1 213 aa19.54■□□□□ 0.72
COL27A1-201ENST00000356083 PLIN2Q99541 437 aa19.54■□□□□ 0.72
COL27A1-201ENST00000356083 SPDYE16A6NNV3 312 aaPredicted RBP19.54■□□□□ 0.72
COL27A1-201ENST00000356083 CLGNO14967 610 aa19.54■□□□□ 0.72
COL27A1-201ENST00000356083 CYP7A1P22680 504 aa19.54■□□□□ 0.72
COL27A1-201ENST00000356083 SPDYE2Q495Y8 402 aa19.54■□□□□ 0.72
COL27A1-201ENST00000356083 TSHZ3Q63HK5 1081 aa19.54■□□□□ 0.72
COL27A1-201ENST00000356083 ORC3Q9UBD5 711 aaPredicted RBP19.54■□□□□ 0.72
COL27A1-201ENST00000356083 FAM170AA1A519 330 aa19.54■□□□□ 0.72
COL27A1-201ENST00000356083 ZEB2O60315 1214 aa19.54■□□□□ 0.72
COL27A1-201ENST00000356083 RAB3GAP1Q15042 981 aa19.54■□□□□ 0.72
COL27A1-201ENST00000356083 DNAAF4Q8WXU2 420 aa19.54■□□□□ 0.72
COL27A1-201ENST00000356083 NOC2LQ9Y3T9 749 aaKnown RBP19.54■□□□□ 0.72
COL27A1-201ENST00000356083 CEP57Q86XR8 500 aa19.54■□□□□ 0.72
COL27A1-201ENST00000356083 HGSO14964 777 aaPredicted RBP19.53■□□□□ 0.72
COL27A1-201ENST00000356083 PDE1CQ14123 709 aaPredicted RBP19.53■□□□□ 0.72
COL27A1-201ENST00000356083 UBE3BQ7Z3V4 1068 aa19.53■□□□□ 0.72
COL27A1-201ENST00000356083 MYO10Q9HD67 2058 aa19.53■□□□□ 0.72
COL27A1-201ENST00000356083 MAEAQ7L5Y9 396 aa19.53■□□□□ 0.72
COL27A1-201ENST00000356083 GBP7Q8N8V2 638 aaPredicted RBP19.53■□□□□ 0.72
COL27A1-201ENST00000356083 IFT81Q8WYA0 676 aa19.53■□□□□ 0.72
COL27A1-201ENST00000356083 ESPNB1AK53 854 aa19.53■□□□□ 0.72
COL27A1-201ENST00000356083 SARNPP82979 210 aaKnown RBP19.53■□□□□ 0.72
COL27A1-201ENST00000356083 KCNH5Q8NCM2 988 aa19.53■□□□□ 0.72
COL27A1-201ENST00000356083 POGZQ7Z3K3 1410 aa19.53■□□□□ 0.72
COL27A1-201ENST00000356083 GJB2P29033 226 aa19.53■□□□□ 0.72
COL27A1-201ENST00000356083 KIAA1524Q8TCG1 905 aa19.53■□□□□ 0.72
COL27A1-201ENST00000356083 AKNAQ7Z591 1439 aa19.53■□□□□ 0.72
COL27A1-201ENST00000356083 B4DLN1 442 aa19.53■□□□□ 0.72
COL27A1-201ENST00000356083 CEBPAP49715 358 aaPredicted RBP19.53■□□□□ 0.72
COL27A1-201ENST00000356083 MRPL12P52815 198 aaKnown RBP19.53■□□□□ 0.72
COL27A1-201ENST00000356083 CTAGE5O15320 804 aa19.52■□□□□ 0.72
COL27A1-201ENST00000356083 NBPF7P0C2Y1 421 aaPredicted RBP19.52■□□□□ 0.72
COL27A1-201ENST00000356083 STX1AQ16623 288 aa19.52■□□□□ 0.72
COL27A1-201ENST00000356083 PRKG1Q13976 671 aa19.52■□□□□ 0.72
COL27A1-201ENST00000356083 JDP2Q8WYK2 163 aa19.52■□□□□ 0.72
COL27A1-201ENST00000356083 SBNO2Q9Y2G9 1366 aa19.52■□□□□ 0.72
COL27A1-201ENST00000356083 ATP6V1AP38606 617 aa19.52■□□□□ 0.72
COL27A1-201ENST00000356083 ASIC1P78348 528 aa19.52■□□□□ 0.72
COL27A1-201ENST00000356083 AQRO60306 1485 aaKnown RBP eCLIP19.52■□□□□ 0.725e-7■■■□□ 16.8
COL27A1-201ENST00000356083 KCNA4P22459 653 aa19.52■□□□□ 0.71
COL27A1-201ENST00000356083 GSTO1P78417 241 aa19.52■□□□□ 0.71
COL27A1-201ENST00000356083 LRRC43Q8N309 656 aa19.52■□□□□ 0.71
COL27A1-201ENST00000356083 KIF3CO14782 793 aa19.51■□□□□ 0.71
COL27A1-201ENST00000356083 LPXNO60711 386 aa19.51■□□□□ 0.71
COL27A1-201ENST00000356083 SYKP43405 635 aa19.51■□□□□ 0.71
COL27A1-201ENST00000356083 CCDC77Q9BR77 488 aa19.51■□□□□ 0.71
COL27A1-201ENST00000356083 FCHSD2O94868 740 aa19.51■□□□□ 0.71
COL27A1-201ENST00000356083 POLD1P28340 1107 aa19.51■□□□□ 0.71
COL27A1-201ENST00000356083 PDE3AQ14432 1141 aa19.51■□□□□ 0.71
COL27A1-201ENST00000356083 LRRC27Q9C0I9 530 aa19.51■□□□□ 0.71
COL27A1-201ENST00000356083 MARCKSP29966 332 aaPredicted RBP19.5■□□□□ 0.71
COL27A1-201ENST00000356083 MCM4P33991 863 aa19.5■□□□□ 0.71
COL27A1-201ENST00000356083 ATP2A2P16615 1042 aaKnown RBP19.5■□□□□ 0.71
COL27A1-201ENST00000356083 RFC1P35251 1148 aaPredicted RBP19.5■□□□□ 0.71
COL27A1-201ENST00000356083 CCDC152Q4G0S7 254 aa19.5■□□□□ 0.71
COL27A1-201ENST00000356083 PPP4R3BQ5MIZ7 849 aa19.5■□□□□ 0.71
COL27A1-201ENST00000356083 GNL1P36915 607 aaPredicted RBP19.5■□□□□ 0.71
COL27A1-201ENST00000356083 SLC8A3P57103 927 aa19.5■□□□□ 0.71
COL27A1-201ENST00000356083 CCDC102BQ68D86 513 aa19.5■□□□□ 0.71
COL27A1-201ENST00000356083 KANK3Q6NY19 840 aa19.5■□□□□ 0.71
COL27A1-201ENST00000356083 UIMC1Q96RL1 719 aa19.5■□□□□ 0.71
COL27A1-201ENST00000356083 SLC4A4Q9Y6R1 1079 aa19.5■□□□□ 0.71
COL27A1-201ENST00000356083 INF2Q27J81 1249 aa19.5■□□□□ 0.71
COL27A1-201ENST00000356083 WDR63Q8IWG1 891 aa19.5■□□□□ 0.71
COL27A1-201ENST00000356083 GOLGA1Q92805 767 aa19.5■□□□□ 0.71
COL27A1-201ENST00000356083 TFCP2L1Q9NZI6 479 aa19.5■□□□□ 0.71
COL27A1-201ENST00000356083 FMNL3Q8IVF7 1028 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms