RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 NSFL1CQ9UNZ2 370 aaKnown RBP19.31■□□□□ 0.68
TRIM13-201ENST00000356017 EYA2O00167 538 aa19.3■□□□□ 0.68
TRIM13-201ENST00000356017 OLFM4Q6UX06 510 aa19.3■□□□□ 0.68
TRIM13-201ENST00000356017 DPP8Q6V1X1 898 aaPredicted RBP19.3■□□□□ 0.68
TRIM13-201ENST00000356017 ARHGAP27Q6ZUM4 889 aa19.3■□□□□ 0.68
TRIM13-201ENST00000356017 PODXL2Q9NZ53 605 aa19.3■□□□□ 0.68
TRIM13-201ENST00000356017 RIPOR2Q9Y4F9 1068 aa19.3■□□□□ 0.68
TRIM13-201ENST00000356017 MROH5Q6ZUA9 1318 aa19.3■□□□□ 0.68
TRIM13-201ENST00000356017 ARFGEF1Q9Y6D6 1849 aa19.3■□□□□ 0.68
TRIM13-201ENST00000356017 TAF1P21675 1872 aa19.29■□□□□ 0.68
TRIM13-201ENST00000356017 COL4A1P02462 1669 aa19.29■□□□□ 0.68
TRIM13-201ENST00000356017 XDHP47989 1333 aa19.29■□□□□ 0.68
TRIM13-201ENST00000356017 IL15P40933 162 aaPredicted RBP19.29■□□□□ 0.68
TRIM13-201ENST00000356017 CHRNDQ07001 517 aa19.29■□□□□ 0.68
TRIM13-201ENST00000356017 G3BP1Q13283 466 aaKnown RBP eCLIP19.29■□□□□ 0.68
TRIM13-201ENST00000356017 SIRT2Q8IXJ6 389 aa19.29■□□□□ 0.68
TRIM13-201ENST00000356017 SUPT20HQ8NEM7 779 aa19.29■□□□□ 0.68
TRIM13-201ENST00000356017 PSMD1Q99460 953 aa19.29■□□□□ 0.68
TRIM13-201ENST00000356017 PUS3Q9BZE2 481 aaKnown RBP19.29■□□□□ 0.68
TRIM13-201ENST00000356017 SIL1Q9H173 461 aa19.29■□□□□ 0.68
TRIM13-201ENST00000356017 PA2G4Q9UQ80 394 aaKnown RBP19.29■□□□□ 0.68
TRIM13-201ENST00000356017 SURF6O75683 361 aaKnown RBP19.28■□□□□ 0.68
TRIM13-201ENST00000356017 GPSM2P81274 684 aa19.28■□□□□ 0.68
TRIM13-201ENST00000356017 LRRC24Q50LG9 513 aa19.28■□□□□ 0.68
TRIM13-201ENST00000356017 TAOK3Q9H2K8 898 aa19.28■□□□□ 0.68
TRIM13-201ENST00000356017 PCDHB15Q9Y5E8 787 aa19.28■□□□□ 0.68
TRIM13-201ENST00000356017 CACNA1SQ13698 1873 aa19.28■□□□□ 0.68
TRIM13-201ENST00000356017 LTBP3Q9NS15 1303 aa19.28■□□□□ 0.68
TRIM13-201ENST00000356017 GOLGB1Q14789 3259 aaKnown RBP19.27■□□□□ 0.68
TRIM13-201ENST00000356017 FKBP4Q02790 459 aaKnown RBP eCLIP19.27■□□□□ 0.68
TRIM13-201ENST00000356017 HSP90AB4PQ58FF6 505 aa19.27■□□□□ 0.68
TRIM13-201ENST00000356017 METTL24Q5JXM2 366 aa19.27■□□□□ 0.68
TRIM13-201ENST00000356017 RTFDC1Q9BY42 306 aaPredicted RBP19.27■□□□□ 0.68
TRIM13-201ENST00000356017 GGA1Q9UJY5 639 aa19.27■□□□□ 0.68
TRIM13-201ENST00000356017 LEMD3Q9Y2U8 911 aa19.27■□□□□ 0.68
TRIM13-201ENST00000356017 NOP58Q9Y2X3 529 aaKnown RBP19.27■□□□□ 0.68
TRIM13-201ENST00000356017 SNED1Q8TER0 1413 aa19.26■□□□□ 0.67
TRIM13-201ENST00000356017 ATP2B4P23634 1241 aa19.26■□□□□ 0.67
TRIM13-201ENST00000356017 ATG9AQ7Z3C6 839 aa19.26■□□□□ 0.67
TRIM13-201ENST00000356017 VPS33BQ9H267 617 aa19.26■□□□□ 0.67
TRIM13-201ENST00000356017 LRRC37AA6NMS7 1700 aa19.26■□□□□ 0.67
TRIM13-201ENST00000356017 OS9Q13438 667 aaPredicted RBP19.25■□□□□ 0.67
TRIM13-201ENST00000356017 CEP126Q9P2H0 1117 aa19.25■□□□□ 0.67
TRIM13-201ENST00000356017 C6orf229H3BNL8 230 aa19.25■□□□□ 0.67
TRIM13-201ENST00000356017 NFKBIEO00221 500 aa19.25■□□□□ 0.67
TRIM13-201ENST00000356017 PDE8BO95263 885 aa19.25■□□□□ 0.67
TRIM13-201ENST00000356017 SLC51AQ86UW1 340 aa19.25■□□□□ 0.67
TRIM13-201ENST00000356017 TBC1D16Q8TBP0 767 aa19.25■□□□□ 0.67
TRIM13-201ENST00000356017 EYA3Q99504 573 aa19.25■□□□□ 0.67
TRIM13-201ENST00000356017 UFL1O94874 794 aa19.24■□□□□ 0.67
TRIM13-201ENST00000356017 KCNJ4P48050 445 aa19.24■□□□□ 0.67
TRIM13-201ENST00000356017 ERC1Q8IUD2 1116 aa19.24■□□□□ 0.67
TRIM13-201ENST00000356017 HELBQ8NG08 1087 aaPredicted RBP19.24■□□□□ 0.67
TRIM13-201ENST00000356017 TAF5LO75529 589 aa19.23■□□□□ 0.67
TRIM13-201ENST00000356017 HDAC1Q13547 482 aaPredicted RBP19.23■□□□□ 0.67
TRIM13-201ENST00000356017 POLLQ9UGP5 575 aa19.23■□□□□ 0.67
TRIM13-201ENST00000356017 ZNF804BA4D1E1 1349 aa19.23■□□□□ 0.67
TRIM13-201ENST00000356017 UBE4AQ14139 1066 aa19.22■□□□□ 0.67
TRIM13-201ENST00000356017 WASHC4Q2M389 1173 aa19.22■□□□□ 0.67
TRIM13-201ENST00000356017 VGLL2Q8N8G2 317 aa19.22■□□□□ 0.67
TRIM13-201ENST00000356017 RWDD1Q9H446 243 aaPredicted RBP19.22■□□□□ 0.67
TRIM13-201ENST00000356017 SPEF2Q9C093 1822 aa19.22■□□□□ 0.67
TRIM13-201ENST00000356017 RAB11FIP3O75154 756 aa19.22■□□□□ 0.67
TRIM13-201ENST00000356017 LMNB1P20700 586 aa19.22■□□□□ 0.67
TRIM13-201ENST00000356017 ZC3H12CQ9C0D7 883 aaKnown RBP19.22■□□□□ 0.67
TRIM13-201ENST00000356017 EXOC6BQ9Y2D4 811 aa19.22■□□□□ 0.67
TRIM13-201ENST00000356017 AKAP2Q9Y2D5 859 aa19.22■□□□□ 0.67
TRIM13-201ENST00000356017 RASSF7Q02833 373 aa19.21■□□□□ 0.67
TRIM13-201ENST00000356017 PUM3Q15397 648 aaKnown RBP19.21■□□□□ 0.67
TRIM13-201ENST00000356017 DCTPP1Q9H773 170 aa19.21■□□□□ 0.67
TRIM13-201ENST00000356017 ZNF277Q9NRM2 450 aaPredicted RBP19.21■□□□□ 0.67
TRIM13-201ENST00000356017 FER1L6Q2WGJ9 1857 aa19.2■□□□□ 0.66
TRIM13-201ENST00000356017 IARSP41252 1262 aaKnown RBP19.2■□□□□ 0.66
TRIM13-201ENST00000356017 KIAA2012Q0VF49 1180 aa19.2■□□□□ 0.66
TRIM13-201ENST00000356017 TFCP2Q12800 502 aa19.2■□□□□ 0.66
TRIM13-201ENST00000356017 PPIP5K2O43314 1243 aa19.19■□□□□ 0.66
TRIM13-201ENST00000356017 SASH1O94885 1247 aa19.19■□□□□ 0.66
TRIM13-201ENST00000356017 ERICH6BQ5W0A0 696 aa19.19■□□□□ 0.66
TRIM13-201ENST00000356017 LPIN2Q92539 896 aa19.19■□□□□ 0.66
TRIM13-201ENST00000356017 KIF1BPQ96EK5 621 aa19.19■□□□□ 0.66
TRIM13-201ENST00000356017 MED23Q9ULK4 1368 aa19.19■□□□□ 0.66
TRIM13-201ENST00000356017 LTBP1Q14766 1721 aa19.18■□□□□ 0.66
TRIM13-201ENST00000356017 IFIT1P09914 478 aaKnown RBP19.18■□□□□ 0.66
TRIM13-201ENST00000356017 C15orf52Q6ZUT6 534 aaKnown RBP19.18■□□□□ 0.66
TRIM13-201ENST00000356017 LARGE2Q8N3Y3 721 aa19.18■□□□□ 0.66
TRIM13-201ENST00000356017 JDP2Q8WYK2 163 aa19.18■□□□□ 0.66
TRIM13-201ENST00000356017 GPR108Q9NPR9 543 aa19.18■□□□□ 0.66
TRIM13-201ENST00000356017 DUOX1Q9NRD9 1551 aa19.18■□□□□ 0.66
TRIM13-201ENST00000356017 SLC5A1P13866 664 aa19.18■□□□□ 0.66
TRIM13-201ENST00000356017 FGFR2P21802 821 aa19.18■□□□□ 0.66
TRIM13-201ENST00000356017 ATP2B3Q16720 1220 aa19.18■□□□□ 0.66
TRIM13-201ENST00000356017 AOC3Q16853 763 aa19.18■□□□□ 0.66
TRIM13-201ENST00000356017 GCC1Q96CN9 775 aa19.18■□□□□ 0.66
TRIM13-201ENST00000356017 G3V3G9 751 aa19.17■□□□□ 0.66
TRIM13-201ENST00000356017 SNAP23O00161 211 aa19.17■□□□□ 0.66
TRIM13-201ENST00000356017 RIMBP2O15034 1052 aa19.17■□□□□ 0.66
TRIM13-201ENST00000356017 DCAF8Q5TAQ9 597 aa19.17■□□□□ 0.66
TRIM13-201ENST00000356017 RHPN1Q8TCX5 695 aa19.17■□□□□ 0.66
TRIM13-201ENST00000356017 WTIPA6NIX2 430 aaPredicted RBP19.16■□□□□ 0.66
TRIM13-201ENST00000356017 LRRCC1Q9C099 1032 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms