RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 PUS3Q9BZE2 481 aaKnown RBP17.74■□□□□ 0.43
STRN3-201ENST00000355683 RNF216Q9NWF9 866 aaPredicted RBP17.74■□□□□ 0.43
STRN3-201ENST00000355683 AXIN2Q9Y2T1 843 aa17.74■□□□□ 0.43
STRN3-201ENST00000355683 ATP2B2Q01814 1243 aa17.74■□□□□ 0.43
STRN3-201ENST00000355683 LRRC24Q50LG9 513 aa17.74■□□□□ 0.43
STRN3-201ENST00000355683 PTPDC1A2A3K4 754 aa17.74■□□□□ 0.43
STRN3-201ENST00000355683 KCNQ4P56696 695 aa17.74■□□□□ 0.43
STRN3-201ENST00000355683 EPHA10Q5JZY3 1008 aa17.74■□□□□ 0.43
STRN3-201ENST00000355683 SLC9C2Q5TAH2 1124 aa17.74■□□□□ 0.43
STRN3-201ENST00000355683 CEP57L1Q8IYX8 460 aa17.74■□□□□ 0.43
STRN3-201ENST00000355683 VWDEQ8N2E2 1590 aa17.74■□□□□ 0.43
STRN3-201ENST00000355683 CWC25Q9NXE8 425 aaPredicted RBP17.73■□□□□ 0.43
STRN3-201ENST00000355683 FAM170AA1A519 330 aa17.73■□□□□ 0.43
STRN3-201ENST00000355683 RANBP6O60518 1105 aaKnown RBP17.73■□□□□ 0.43
STRN3-201ENST00000355683 ANAPC15P60006 121 aa17.73■□□□□ 0.43
STRN3-201ENST00000355683 NR1I2O75469 434 aa17.73■□□□□ 0.43
STRN3-201ENST00000355683 CCDC69A6NI79 296 aa17.72■□□□□ 0.43
STRN3-201ENST00000355683 TAF5LO75529 589 aa17.72■□□□□ 0.43
STRN3-201ENST00000355683 DDX21Q9NR30 783 aaKnown RBP eCLIP17.72■□□□□ 0.43
STRN3-201ENST00000355683 PAG1Q9NWQ8 432 aa17.72■□□□□ 0.43
STRN3-201ENST00000355683 MCMDC2Q4G0Z9 681 aa17.72■□□□□ 0.43
STRN3-201ENST00000355683 SYNE4Q8N205 404 aa17.72■□□□□ 0.43
STRN3-201ENST00000355683 PHKBQ93100 1093 aa17.72■□□□□ 0.43
STRN3-201ENST00000355683 SLC26A6Q9BXS9 759 aa17.72■□□□□ 0.43
STRN3-201ENST00000355683 FER1L4A9Z1Z3 1794 aa17.72■□□□□ 0.43
STRN3-201ENST00000355683 IFIT3O14879 490 aaKnown RBP17.72■□□□□ 0.43
STRN3-201ENST00000355683 ZNF445P59923 1031 aa17.72■□□□□ 0.43
STRN3-201ENST00000355683 OLFM4Q6UX06 510 aa17.72■□□□□ 0.43
STRN3-201ENST00000355683 ZC3H13Q5T200 1668 aaKnown RBP17.72■□□□□ 0.43
STRN3-201ENST00000355683 KRT32Q14532 448 aa17.72■□□□□ 0.43
STRN3-201ENST00000355683 UIMC1Q96RL1 719 aa17.72■□□□□ 0.43
STRN3-201ENST00000355683 DEPDC5O75140 1603 aa17.71■□□□□ 0.43
STRN3-201ENST00000355683 LRRFIP1Q32MZ4 808 aaKnown RBP17.71■□□□□ 0.43
STRN3-201ENST00000355683 NAT10Q9H0A0 1025 aaKnown RBP17.71■□□□□ 0.43
STRN3-201ENST00000355683 NAPBQ9H115 298 aa17.71■□□□□ 0.43
STRN3-201ENST00000355683 A0A1B0GUL7 405 aa17.71■□□□□ 0.43
STRN3-201ENST00000355683 PRDM1O75626 825 aa17.71■□□□□ 0.43
STRN3-201ENST00000355683 DHX37Q8IY37 1157 aaKnown RBP17.71■□□□□ 0.43
STRN3-201ENST00000355683 NOL7Q9UMY1 257 aaKnown RBP17.71■□□□□ 0.43
STRN3-201ENST00000355683 NEXMIFQ5QGS0 1516 aa17.71■□□□□ 0.43
STRN3-201ENST00000355683 FAM135BQ49AJ0 1406 aa17.71■□□□□ 0.43
STRN3-201ENST00000355683 SBNO1A3KN83 1393 aa17.71■□□□□ 0.42
STRN3-201ENST00000355683 URI1O94763 535 aaPredicted RBP17.71■□□□□ 0.42
STRN3-201ENST00000355683 PTPN14Q15678 1187 aa17.71■□□□□ 0.42
STRN3-201ENST00000355683 WWC3Q9ULE0 1092 aa17.71■□□□□ 0.42
STRN3-201ENST00000355683 MTMR6Q9Y217 621 aa17.71■□□□□ 0.42
STRN3-201ENST00000355683 GCKRQ14397 625 aa17.7■□□□□ 0.42
STRN3-201ENST00000355683 AK9Q5TCS8 1911 aa17.7■□□□□ 0.42
STRN3-201ENST00000355683 TNNI3KQ59H18 835 aa17.7■□□□□ 0.42
STRN3-201ENST00000355683 CCDC34Q96HJ3 373 aa17.7■□□□□ 0.42
STRN3-201ENST00000355683 LSG1Q9H089 658 aaKnown RBP17.7■□□□□ 0.42
STRN3-201ENST00000355683 FPGT-TNNI3KV9GXZ4 949 aa17.7■□□□□ 0.42
STRN3-201ENST00000355683 ADAMTS13Q76LX8 1427 aa17.7■□□□□ 0.42
STRN3-201ENST00000355683 SPATA31D1Q6ZQQ2 1576 aa17.7■□□□□ 0.42
STRN3-201ENST00000355683 POLR3GO15318 223 aaPredicted RBP17.7■□□□□ 0.42
STRN3-201ENST00000355683 DNA2P51530 1060 aa17.7■□□□□ 0.42
STRN3-201ENST00000355683 TEX35Q5T0J7 233 aa17.7■□□□□ 0.42
STRN3-201ENST00000355683 PATL2C9JE40 543 aaKnown RBP17.69■□□□□ 0.42
STRN3-201ENST00000355683 SASH1O94885 1247 aa17.69■□□□□ 0.42
STRN3-201ENST00000355683 SKILP12757 684 aa17.69■□□□□ 0.42
STRN3-201ENST00000355683 AFMP43652 599 aa17.69■□□□□ 0.42
STRN3-201ENST00000355683 STX17P56962 302 aa17.69■□□□□ 0.42
STRN3-201ENST00000355683 STAMQ92783 540 aa17.69■□□□□ 0.42
STRN3-201ENST00000355683 PYCARDQ9ULZ3 195 aa17.69■□□□□ 0.42
STRN3-201ENST00000355683 IBTKQ9P2D0 1353 aaPredicted RBP17.69■□□□□ 0.42
STRN3-201ENST00000355683 ERCC3P19447 782 aa17.69■□□□□ 0.42
STRN3-201ENST00000355683 TRMT1LQ7Z2T5 733 aaKnown RBP17.69■□□□□ 0.42
STRN3-201ENST00000355683 FAM200AQ8TCP9 573 aa17.69■□□□□ 0.42
STRN3-201ENST00000355683 DBNLQ9UJU6 430 aaKnown RBP17.69■□□□□ 0.42
STRN3-201ENST00000355683 G3V3G9 751 aa17.69■□□□□ 0.42
STRN3-201ENST00000355683 DCAF8Q5TAQ9 597 aa17.69■□□□□ 0.42
STRN3-201ENST00000355683 PPARDQ03181 441 aa17.68■□□□□ 0.42
STRN3-201ENST00000355683 PRC1O43663 620 aa17.68■□□□□ 0.42
STRN3-201ENST00000355683 EEF2KMTQ96G04 330 aa17.68■□□□□ 0.42
STRN3-201ENST00000355683 INTS4Q96HW7 963 aaKnown RBP17.68■□□□□ 0.42
STRN3-201ENST00000355683 TULP4Q9NRJ4 1543 aa17.68■□□□□ 0.42
STRN3-201ENST00000355683 CEP170BQ9Y4F5 1589 aaPredicted RBP17.68■□□□□ 0.42
STRN3-201ENST00000355683 COBLO75128 1261 aa17.68■□□□□ 0.42
STRN3-201ENST00000355683 SLC3A2P08195 630 aaKnown RBP17.68■□□□□ 0.42
STRN3-201ENST00000355683 ARID5BQ14865 1188 aa17.68■□□□□ 0.42
STRN3-201ENST00000355683 NCBP3Q53F19 620 aaKnown RBP17.68■□□□□ 0.42
STRN3-201ENST00000355683 CBX8Q9HC52 389 aa17.68■□□□□ 0.42
STRN3-201ENST00000355683 ARGLU1Q9NWB6 273 aaPredicted RBP17.68■□□□□ 0.42
STRN3-201ENST00000355683 U2AF2P26368 475 aaKnown RBP eCLIP17.67■□□□□ 0.422e-7■■■■□ 24.4
STRN3-201ENST00000355683 B4E1Z4 1266 aa17.67■□□□□ 0.42
STRN3-201ENST00000355683 RPS6KB1P23443 525 aa17.67■□□□□ 0.42
STRN3-201ENST00000355683 ENOX2Q16206 610 aaKnown RBP17.67■□□□□ 0.42
STRN3-201ENST00000355683 PI4K2BQ8TCG2 481 aa17.67■□□□□ 0.42
STRN3-201ENST00000355683 PLIN2Q99541 437 aa17.67■□□□□ 0.42
STRN3-201ENST00000355683 UBAC1Q9BSL1 405 aa17.67■□□□□ 0.42
STRN3-201ENST00000355683 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.67■□□□□ 0.42
STRN3-201ENST00000355683 GOLGA8FQ08AF8 430 aa17.67■□□□□ 0.42
STRN3-201ENST00000355683 GOLGA8DPQ0D2H9 430 aa17.67■□□□□ 0.42
STRN3-201ENST00000355683 COL9A3Q14050 684 aaPredicted RBP17.67■□□□□ 0.42
STRN3-201ENST00000355683 TMEM67Q5HYA8 995 aa17.67■□□□□ 0.42
STRN3-201ENST00000355683 ALDH1L1O75891 902 aa17.66■□□□□ 0.42
STRN3-201ENST00000355683 SFPQP23246 707 aaKnown RBP eCLIP17.66■□□□□ 0.423e-6■■□□□ 13.4
STRN3-201ENST00000355683 NAA30Q147X3 362 aaPredicted RBP17.66■□□□□ 0.42
STRN3-201ENST00000355683 TSR1Q2NL82 804 aaKnown RBP17.66■□□□□ 0.42
STRN3-201ENST00000355683 ZCRB1Q8TBF4 217 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms