RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ATP8B2P98198 1209 aa15.11■□□□□ 0.01
SCN8A-202ENST00000355133 NFATC2IPQ8NCF5 419 aa15.11■□□□□ 0.01
SCN8A-202ENST00000355133 ESYT1Q9BSJ8 1104 aa15.11■□□□□ 0.01
SCN8A-202ENST00000355133 CA8P35219 290 aa15.11■□□□□ 0.01
SCN8A-202ENST00000355133 NMIQ13287 307 aaPredicted RBP15.11■□□□□ 0.01
SCN8A-202ENST00000355133 MTHFSDQ2M296 383 aaKnown RBP15.11■□□□□ 0.01
SCN8A-202ENST00000355133 TMTC2Q8N394 836 aa15.11■□□□□ 0.01
SCN8A-202ENST00000355133 CLEC11AQ9Y240 323 aa15.11■□□□□ 0.01
SCN8A-202ENST00000355133 HDAC1Q13547 482 aaPredicted RBP15.11■□□□□ 0.01
SCN8A-202ENST00000355133 SMC1AQ14683 1233 aaKnown RBP15.11■□□□□ 0.01
SCN8A-202ENST00000355133 INCENPQ9NQS7 918 aa15.11■□□□□ 0.01
SCN8A-202ENST00000355133 KDM5BQ9UGL1 1544 aa15.11■□□□□ 0.01
SCN8A-202ENST00000355133 HCLS1P14317 486 aaPredicted RBP15.11■□□□□ 0.01
SCN8A-202ENST00000355133 RBM26Q5T8P6 1007 aaKnown RBP15.11■□□□□ 0.01
SCN8A-202ENST00000355133 PAG1Q9NWQ8 432 aa15.11■□□□□ 0.01
SCN8A-202ENST00000355133 SMARCC2Q8TAQ2 1214 aa15.11■□□□□ 0.01
SCN8A-202ENST00000355133 AKR1B10O60218 316 aa15.1■□□□□ 0.01
SCN8A-202ENST00000355133 ECM2O94769 699 aaPredicted RBP15.1■□□□□ 0.01
SCN8A-202ENST00000355133 MIGA1Q8NAN2 632 aa15.1■□□□□ 0.01
SCN8A-202ENST00000355133 SMARCC1Q92922 1105 aaPredicted RBP15.1■□□□□ 0.01
SCN8A-202ENST00000355133 CALM1P0DP23 149 aa15.1■□□□□ 0.01
SCN8A-202ENST00000355133 CALM2P0DP24 149 aa15.1■□□□□ 0.01
SCN8A-202ENST00000355133 CALM3P0DP25 149 aa15.1■□□□□ 0.01
SCN8A-202ENST00000355133 VTI1AQ96AJ9 217 aa15.1■□□□□ 0.01
SCN8A-202ENST00000355133 PCDHB15Q9Y5E8 787 aa15.1■□□□□ 0.01
SCN8A-202ENST00000355133 ZSCAN23Q3MJ62 389 aa15.1■□□□□ 0.01
SCN8A-202ENST00000355133 MAATS1Q7Z4T9 603 aa15.1■□□□□ 0.01
SCN8A-202ENST00000355133 ANKRD44Q8N8A2 993 aa15.1■□□□□ 0.01
SCN8A-202ENST00000355133 SYNCQ9H7C4 482 aa15.1■□□□□ 0.01
SCN8A-202ENST00000355133 TOM1O60784 492 aa15.1■□□□□ 0.01
SCN8A-202ENST00000355133 GNG11P61952 73 aa15.1■□□□□ 0.01
SCN8A-202ENST00000355133 RNF187Q5TA31 235 aaPredicted RBP15.1■□□□□ 0.01
SCN8A-202ENST00000355133 CHST3Q7LGC8 479 aa15.1■□□□□ 0.01
SCN8A-202ENST00000355133 UBASH3AP57075 661 aa15.09■□□□□ 0.01
SCN8A-202ENST00000355133 PLS1Q14651 629 aa15.09■□□□□ 0.01
SCN8A-202ENST00000355133 CGNQ9P2M7 1197 aaKnown RBP15.09■□□□□ 0.01
SCN8A-202ENST00000355133 RIMBP2O15034 1052 aa15.09■□□□□ 0.01
SCN8A-202ENST00000355133 TBC1D5Q92609 795 aa15.09■□□□□ 0.01
SCN8A-202ENST00000355133 JAG2Q9Y219 1238 aa15.09■□□□□ 0.01
SCN8A-202ENST00000355133 PHACTR2O75167 634 aa15.09■□□□□ 0.01
SCN8A-202ENST00000355133 IL2RBP14784 551 aa15.09■□□□□ 0.01
SCN8A-202ENST00000355133 CWF19L2Q2TBE0 894 aaKnown RBP15.09■□□□□ 0.01
SCN8A-202ENST00000355133 RGS22Q8NE09 1264 aa15.09■□□□□ 0.01
SCN8A-202ENST00000355133 SPAG5Q96R06 1193 aa15.09■□□□□ 0.01
SCN8A-202ENST00000355133 PRDM10Q9NQV6 1147 aa15.09■□□□□ 0.01
SCN8A-202ENST00000355133 STAMBPO95630 424 aa15.09■□□□□ 0.01
SCN8A-202ENST00000355133 RALGAPBQ86X10 1494 aa15.08■□□□□ 0.01
SCN8A-202ENST00000355133 LMAN1P49257 510 aa15.08■□□□□ 0.01
SCN8A-202ENST00000355133 TTC16Q8NEE8 873 aa15.08■□□□□ 0.01
SCN8A-202ENST00000355133 GNAQP50148 359 aa15.08■□□□□ 0
SCN8A-202ENST00000355133 ASIC1P78348 528 aa15.08■□□□□ 0
SCN8A-202ENST00000355133 ANO6Q4KMQ2 910 aa15.08■□□□□ 0
SCN8A-202ENST00000355133 KCNG4Q8TDN1 519 aa15.08■□□□□ 0
SCN8A-202ENST00000355133 LAMC3Q9Y6N6 1575 aa15.08■□□□□ 0
SCN8A-202ENST00000355133 MAGEB6Q8N7X4 407 aa15.08■□□□□ 0
SCN8A-202ENST00000355133 NYXQ9GZU5 481 aa15.08■□□□□ 0
SCN8A-202ENST00000355133 NSFL1CQ9UNZ2 370 aaKnown RBP15.08■□□□□ 0
SCN8A-202ENST00000355133 IRS4O14654 1257 aaPredicted RBP15.08■□□□□ 0
SCN8A-202ENST00000355133 CTR9Q6PD62 1173 aa15.08■□□□□ 0
SCN8A-202ENST00000355133 USP48Q86UV5 1035 aa15.08■□□□□ 0
SCN8A-202ENST00000355133 BMP15O95972 392 aa15.07■□□□□ 0
SCN8A-202ENST00000355133 KRT13P13646 458 aa15.07■□□□□ 0
SCN8A-202ENST00000355133 HOMER2Q9NSB8 354 aa15.07■□□□□ 0
SCN8A-202ENST00000355133 MCM9Q9NXL9 1143 aa15.07■□□□□ 0
SCN8A-202ENST00000355133 TFCP2L1Q9NZI6 479 aa15.07■□□□□ 0
SCN8A-202ENST00000355133 GOLGA6L9A6NEM1 432 aa15.07■□□□□ 0
SCN8A-202ENST00000355133 ACTN2P35609 894 aa15.07■□□□□ 0
SCN8A-202ENST00000355133 MRPS27Q92552 414 aaKnown RBP15.07■□□□□ 0
SCN8A-202ENST00000355133 DHX58Q96C10 678 aa15.07■□□□□ 0
SCN8A-202ENST00000355133 FSD2A1L4K1 749 aa15.07■□□□□ 0
SCN8A-202ENST00000355133 POTEB2H3BUK9 544 aa15.07■□□□□ 0
SCN8A-202ENST00000355133 NF2P35240 595 aa15.07■□□□□ 0
SCN8A-202ENST00000355133 CEP135Q66GS9 1140 aa15.07■□□□□ 0
SCN8A-202ENST00000355133 TPTE2Q6XPS3 522 aa15.07■□□□□ 0
SCN8A-202ENST00000355133 TFCP2Q12800 502 aa15.07■□□□□ 0
SCN8A-202ENST00000355133 ZC3H12CQ9C0D7 883 aaKnown RBP15.07■□□□□ 0
SCN8A-202ENST00000355133 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
SCN8A-202ENST00000355133 RTCBQ9Y3I0 505 aaKnown RBP15.07■□□□□ 0
SCN8A-202ENST00000355133 CCDC172P0C7W6 258 aa15.06■□□□□ 0
SCN8A-202ENST00000355133 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.06■□□□□ 0
SCN8A-202ENST00000355133 MRVI1Q9Y6F6 885 aa15.06■□□□□ 0
SCN8A-202ENST00000355133 RNF113AO15541 343 aaKnown RBP15.06■□□□□ 0
SCN8A-202ENST00000355133 KRT24Q2M2I5 525 aa15.06■□□□□ 0
SCN8A-202ENST00000355133 KLHL40Q2TBA0 621 aa15.06■□□□□ 0
SCN8A-202ENST00000355133 PPP4R3BQ5MIZ7 849 aa15.06■□□□□ 0
SCN8A-202ENST00000355133 ZNF830Q96NB3 372 aaPredicted RBP15.06■□□□□ 0
SCN8A-202ENST00000355133 UHRF1BP1LA0JNW5 1464 aa15.06■□□□□ 0
SCN8A-202ENST00000355133 KIAA0753Q2KHM9 967 aa15.06■□□□□ 0
SCN8A-202ENST00000355133 ZNF354CQ86Y25 554 aa15.06■□□□□ 0
SCN8A-202ENST00000355133 FERMT1Q9BQL6 677 aa15.06■□□□□ 0
SCN8A-202ENST00000355133 C6orf50Q9HD87 102 aa15.06■□□□□ 0
SCN8A-202ENST00000355133 POLKQ9UBT6 870 aa15.06■□□□□ 0
SCN8A-202ENST00000355133 PARP3Q9Y6F1 533 aa15.06■□□□□ 0
SCN8A-202ENST00000355133 RIMS2Q9UQ26 1411 aa15.06■□□□□ 0
SCN8A-202ENST00000355133 TRAF1Q13077 416 aa15.05■□□□□ 0
SCN8A-202ENST00000355133 IFI16Q16666 785 aaKnown RBP15.05■□□□□ 0
SCN8A-202ENST00000355133 UVSSAQ2YD98 709 aa15.05■□□□□ 0
SCN8A-202ENST00000355133 TNNI2P48788 182 aa15.05■□□□□ 0
SCN8A-202ENST00000355133 DNM1Q05193 864 aaKnown RBP15.05■□□□□ 0
SCN8A-202ENST00000355133 CCDC175P0C221 793 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms