RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 SSFA2P28290 1259 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 RRAGBQ5VZM2 374 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 VPS52Q8N1B4 723 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 RFX1P22670 979 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 RASA3Q14644 834 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 KRT23Q9C075 422 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 SMIM23A6NLE4 172 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 ZBTB43O43298 467 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 CIB2O75838 187 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 IVLP07476 585 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 ERCC6LQ2NKX8 1250 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 CCDC65Q8IXS2 484 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 NEK1Q96PY6 1258 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 ATP6V0A2Q9Y487 856 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 CCDC152Q4G0S7 254 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 KCNG4Q8TDN1 519 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 TBC1D31Q96DN5 1066 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 CCDC110Q8TBZ0 833 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 ERBINQ96RT1 1412 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 ECM2O94769 699 aaPredicted RBP6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 GIPC1O14908 333 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 GOLGA1Q92805 767 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 AGTPBP1Q9UPW5 1226 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 MAP3K2Q9Y2U5 619 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 CACYBPQ9HB71 228 aaKnown RBP6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 RSPH14Q9UHP6 348 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 CUL4BQ13620 913 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 GNAQP50148 359 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 RSPH3Q86UC2 560 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 ZBTB3Q9H5J0 574 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 DBF4Q9UBU7 674 aaPredicted RBP6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 SPDYE3A6NKU9 549 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 PPP1R7Q15435 360 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 TACC3Q9Y6A5 838 aa6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 F8W031 263 aaPredicted RBP6.55□□□□□ -1.36
SRGAP1-201ENST00000355086 BIRC2Q13490 618 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 ALDH1L2Q3SY69 923 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 KRT222Q8N1A0 295 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 AKNAD1Q5T1N1 836 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 TMTC2Q8N394 836 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 TEX13AQ9BXU3 409 aaPredicted RBP6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 SEPT14Q6ZU15 432 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 NBPF6Q5VWK0 638 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 NBPF5PQ86XG9 351 aaPredicted RBP6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 KIFC2Q96AC6 838 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 NBPF4Q96M43 638 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 SAMD15Q9P1V8 674 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 MTRF1LQ9UGC7 380 aaKnown RBP6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 HSP90AA4PQ58FG1 418 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 CEP120Q8N960 986 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 SNRKQ9NRH2 765 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 F6X3S4 739 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 NAPAP54920 295 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 SARNPP82979 210 aaKnown RBP6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 BIN2Q9UBW5 565 aaPredicted RBP6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 FGD6Q6ZV73 1430 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 ESR2Q92731 530 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 FANCD2Q9BXW9 1451 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 UAP1Q16222 522 aaPredicted RBP6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 CEP57Q86XR8 500 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 SPAG1Q07617 926 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 PTPRCP08575 1304 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 POLA1P09884 1462 aaPredicted RBP6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 CAPZA3Q96KX2 299 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 SETDB2Q96T68 719 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 ECHDC1Q9NTX5 307 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 GAPVD1Q14C86 1478 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 ZFYP08048 801 aaPredicted RBP6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 UQCRFS1P1P0C7P4 283 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 PROCA1Q8NCQ7 364 aaPredicted RBP6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 STMN2Q93045 179 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 CNNM2Q9H8M5 875 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 NEK11Q8NG66 645 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 WDR66Q8TBY9 1149 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 GIMAP6Q6P9H5 292 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 ALG1Q9BT22 464 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 POGZQ7Z3K3 1410 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 GABPAQ06546 454 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 NAA25Q14CX7 972 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 SETDB1Q15047 1291 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 HS2ST1Q7LGA3 356 aa6.54□□□□□ -1.36
SRGAP1-201ENST00000355086 ATP5J2-PTCD1G3V325 749 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 CPLX4Q7Z7G2 160 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 TNPO1Q92973 898 aaKnown RBP6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 SWAP70Q9UH65 585 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 MTUS1Q9ULD2 1270 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 E7EVH7 732 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 KRT83P78385 493 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 INTS8Q75QN2 995 aaKnown RBP6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 CYP7A1P22680 504 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 KLF18A0A0U1RQI7 1052 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 ATP11AP98196 1134 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 IFT81Q8WYA0 676 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 SLFN5Q08AF3 891 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 CLUL1Q15846 466 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 KRT86O43790 486 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 KRT5P13647 590 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 SLC8A3P57103 927 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 FRMD4BQ9Y2L6 1034 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 MROH2BQ7Z745 1585 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms