RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 ZNF215Q9UL58 517 aaPredicted RBP11.03□□□□□ -0.64
SMG6-202ENST00000354901 ERC1Q8IUD2 1116 aa11.03□□□□□ -0.64
SMG6-202ENST00000354901 NRBP1Q9UHY1 535 aa11.03□□□□□ -0.64
SMG6-202ENST00000354901 PPFIA3O75145 1194 aa11.03□□□□□ -0.64
SMG6-202ENST00000354901 IGKV5-2P06315 115 aa11.03□□□□□ -0.64
SMG6-202ENST00000354901 FOSBP53539 338 aa11.03□□□□□ -0.64
SMG6-202ENST00000354901 NEXNQ0ZGT2 675 aa11.03□□□□□ -0.64
SMG6-202ENST00000354901 LARP1BQ659C4 914 aaKnown RBP11.03□□□□□ -0.64
SMG6-202ENST00000354901 TPCN1Q9ULQ1 816 aa11.03□□□□□ -0.64
SMG6-202ENST00000354901 CHRNA2Q15822 529 aa11.02□□□□□ -0.65
SMG6-202ENST00000354901 CAMK4Q16566 473 aa11.02□□□□□ -0.65
SMG6-202ENST00000354901 CCDC183Q5T5S1 534 aa11.02□□□□□ -0.65
SMG6-202ENST00000354901 TFIP11Q9UBB9 837 aaKnown RBP11.02□□□□□ -0.65
SMG6-202ENST00000354901 AP5Z1O43299 807 aa11.02□□□□□ -0.65
SMG6-202ENST00000354901 MTX1Q13505 466 aa11.02□□□□□ -0.65
SMG6-202ENST00000354901 SKIDA1Q1XH10 827 aa11.02□□□□□ -0.65
SMG6-202ENST00000354901 FBXO38Q6PIJ6 1188 aa11.02□□□□□ -0.65
SMG6-202ENST00000354901 KRBA2Q6ZNG9 492 aa11.02□□□□□ -0.65
SMG6-202ENST00000354901 ZNF589Q86UQ0 364 aaPredicted RBP11.02□□□□□ -0.65
SMG6-202ENST00000354901 TRIM5Q9C035 493 aa11.02□□□□□ -0.65
SMG6-202ENST00000354901 DDX21Q9NR30 783 aaKnown RBP eCLIP11.02□□□□□ -0.65
SMG6-202ENST00000354901 MTMR6Q9Y217 621 aa11.02□□□□□ -0.65
SMG6-202ENST00000354901 TUBGCP6Q96RT7 1819 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 ST3GAL1Q11201 340 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 ZNF790Q6PG37 636 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 UBE3BQ7Z3V4 1068 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 ZNF496Q96IT1 587 aaPredicted RBP11.01□□□□□ -0.65
SMG6-202ENST00000354901 DRC1Q96MC2 740 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 USP16Q9Y5T5 823 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 UBE2HP62256 183 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 FAM193AP78312 1265 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 NECTIN1Q15223 517 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 VPS53Q5VIR6 699 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 SYT10Q6XYQ8 523 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 CCDC129Q6ZRS4 1044 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 FAM184AQ8NB25 1140 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 RASSF4Q9H2L5 321 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 OVOS2A0A0G2JMS6 1433 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 TNS3Q68CZ2 1445 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 SMTNL1A8MU46 457 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 SLC27A2O14975 620 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 CTIFO43310 598 aaKnown RBP11.01□□□□□ -0.65
SMG6-202ENST00000354901 BLOC1S2Q6QNY1 142 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 CDC37L1Q7L3B6 337 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 ZNF397Q8NF99 534 aaPredicted RBP11.01□□□□□ -0.65
SMG6-202ENST00000354901 LRRC2Q9BYS8 371 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 ZSWIM6Q9HCJ5 1215 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 ATP6V1DQ9Y5K8 247 aa11.01□□□□□ -0.65
SMG6-202ENST00000354901 LMO7Q8WWI1 1683 aa11□□□□□ -0.65
SMG6-202ENST00000354901 SEC62Q99442 399 aaKnown RBP11□□□□□ -0.65
SMG6-202ENST00000354901 MORC2Q9Y6X9 1032 aaPredicted RBP11□□□□□ -0.65
SMG6-202ENST00000354901 CRYBG1Q9Y4K1 1723 aa11□□□□□ -0.65
SMG6-202ENST00000354901 PDIA6Q15084 440 aa11□□□□□ -0.65
SMG6-202ENST00000354901 SART3Q15020 963 aaKnown RBP11□□□□□ -0.65
SMG6-202ENST00000354901 SLFNL1Q499Z3 407 aa11□□□□□ -0.65
SMG6-202ENST00000354901 CEP135Q66GS9 1140 aa11□□□□□ -0.65
SMG6-202ENST00000354901 LARP1Q6PKG0 1096 aaKnown RBP11□□□□□ -0.65
SMG6-202ENST00000354901 LUZP1Q86V48 1076 aa11□□□□□ -0.65
SMG6-202ENST00000354901 CCDC191Q8NCU4 936 aa11□□□□□ -0.65
SMG6-202ENST00000354901 NEURL1BA8MQ27 555 aa10.99□□□□□ -0.65
SMG6-202ENST00000354901 EPB41L2O43491 1005 aaKnown RBP10.99□□□□□ -0.65
SMG6-202ENST00000354901 FBXW7Q969H0 707 aa10.99□□□□□ -0.65
SMG6-202ENST00000354901 IL17RAQ96F46 866 aa10.99□□□□□ -0.65
SMG6-202ENST00000354901 DDX11Q96FC9 970 aa10.99□□□□□ -0.65
SMG6-202ENST00000354901 USP42Q9H9J4 1324 aaKnown RBP10.99□□□□□ -0.65
SMG6-202ENST00000354901 HSP90B1P14625 803 aaKnown RBP10.99□□□□□ -0.65
SMG6-202ENST00000354901 TFCP2Q12800 502 aa10.99□□□□□ -0.65
SMG6-202ENST00000354901 GCKRQ14397 625 aa10.99□□□□□ -0.65
SMG6-202ENST00000354901 DDX46Q7L014 1031 aaKnown RBP10.99□□□□□ -0.65
SMG6-202ENST00000354901 HOMEZQ8IX15 550 aa10.99□□□□□ -0.65
SMG6-202ENST00000354901 CKAP2LQ8IYA6 745 aa10.99□□□□□ -0.65
SMG6-202ENST00000354901 TTC5Q8N0Z6 440 aa10.99□□□□□ -0.65
SMG6-202ENST00000354901 MAP4K1Q92918 833 aa10.99□□□□□ -0.65
SMG6-202ENST00000354901 ZSCAN31Q96LW9 406 aaPredicted RBP10.99□□□□□ -0.65
SMG6-202ENST00000354901 ANKRD65E5RJM6 399 aa10.99□□□□□ -0.65
SMG6-202ENST00000354901 CEBPZQ03701 1054 aaKnown RBP10.99□□□□□ -0.65
SMG6-202ENST00000354901 ANKRD13DQ6ZTN6 518 aa10.99□□□□□ -0.65
SMG6-202ENST00000354901 ZNF526Q8TF50 670 aaPredicted RBP10.99□□□□□ -0.65
SMG6-202ENST00000354901 TSPYL1Q9H0U9 437 aa10.99□□□□□ -0.65
SMG6-202ENST00000354901 SH2B1Q9NRF2 756 aaPredicted RBP10.99□□□□□ -0.65
SMG6-202ENST00000354901 GOLGA6L4A6NEF3 574 aa10.98□□□□□ -0.65
SMG6-202ENST00000354901 NEUROD6Q96NK8 337 aa10.98□□□□□ -0.65
SMG6-202ENST00000354901 TAOK2Q9UL54 1235 aa10.98□□□□□ -0.65
SMG6-202ENST00000354901 ZNF330Q9Y3S2 320 aaPredicted RBP10.98□□□□□ -0.65
SMG6-202ENST00000354901 CLGNO14967 610 aa10.98□□□□□ -0.65
SMG6-202ENST00000354901 TATP17735 454 aaPredicted RBP10.98□□□□□ -0.65
SMG6-202ENST00000354901 PSMA5P28066 241 aa10.98□□□□□ -0.65
SMG6-202ENST00000354901 HSPA2P54652 639 aa10.98□□□□□ -0.65
SMG6-202ENST00000354901 E2F4Q16254 413 aa10.98□□□□□ -0.65
SMG6-202ENST00000354901 UVSSAQ2YD98 709 aa10.98□□□□□ -0.65
SMG6-202ENST00000354901 RNF20Q5VTR2 975 aa10.98□□□□□ -0.65
SMG6-202ENST00000354901 TTC6Q86TZ1 520 aa10.98□□□□□ -0.65
SMG6-202ENST00000354901 A0A087WZG4 1122 aa10.97□□□□□ -0.65
SMG6-202ENST00000354901 JAK2O60674 1132 aa10.97□□□□□ -0.65
SMG6-202ENST00000354901 DBNDD2Q9BQY9 259 aa10.97□□□□□ -0.65
SMG6-202ENST00000354901 SLC52A2Q9HAB3 445 aa10.97□□□□□ -0.65
SMG6-202ENST00000354901 LCMT1Q9UIC8 334 aa10.97□□□□□ -0.65
SMG6-202ENST00000354901 DBNLQ9UJU6 430 aaKnown RBP10.97□□□□□ -0.65
SMG6-202ENST00000354901 ERBB3P21860 1342 aa10.97□□□□□ -0.65
SMG6-202ENST00000354901 TULP2O00295 520 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms