RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 CEP126Q9P2H0 1117 aa26.44■■□□□ 1.82
NKX2-1-201ENST00000354822 UVSSAQ2YD98 709 aa26.43■■□□□ 1.82
NKX2-1-201ENST00000354822 LRRC24Q50LG9 513 aa26.43■■□□□ 1.82
NKX2-1-201ENST00000354822 KIF6Q6ZMV9 814 aa26.43■■□□□ 1.82
NKX2-1-201ENST00000354822 SEC62Q99442 399 aaKnown RBP26.43■■□□□ 1.82
NKX2-1-201ENST00000354822 AKAP2Q9Y2D5 859 aa26.43■■□□□ 1.82
NKX2-1-201ENST00000354822 STARD3NLO95772 234 aa26.43■■□□□ 1.82
NKX2-1-201ENST00000354822 CYP21A2P08686 494 aa26.43■■□□□ 1.82
NKX2-1-201ENST00000354822 LRRFIP1Q32MZ4 808 aaKnown RBP26.43■■□□□ 1.82
NKX2-1-201ENST00000354822 CCDC129Q6ZRS4 1044 aa26.43■■□□□ 1.82
NKX2-1-201ENST00000354822 TCEANC2Q96MN5 208 aa26.43■■□□□ 1.82
NKX2-1-201ENST00000354822 PLA2G12BQ9BX93 195 aa26.43■■□□□ 1.82
NKX2-1-201ENST00000354822 A0A1B0GUL7 405 aa26.42■■□□□ 1.82
NKX2-1-201ENST00000354822 IFIT1P09914 478 aaKnown RBP26.42■■□□□ 1.82
NKX2-1-201ENST00000354822 ZMYM1Q5SVZ6 1142 aa26.42■■□□□ 1.82
NKX2-1-201ENST00000354822 ITGB4P16144 1822 aa26.42■■□□□ 1.82
NKX2-1-201ENST00000354822 PCCAP05165 728 aaPredicted RBP26.41■■□□□ 1.82
NKX2-1-201ENST00000354822 MSNP26038 577 aaKnown RBP26.41■■□□□ 1.82
NKX2-1-201ENST00000354822 KRT85P78386 507 aa26.41■■□□□ 1.82
NKX2-1-201ENST00000354822 COL9A3Q14050 684 aaPredicted RBP26.41■■□□□ 1.82
NKX2-1-201ENST00000354822 LTBP4Q8N2S1 1624 aa26.41■■□□□ 1.82
NKX2-1-201ENST00000354822 ZNF594Q96JF6 807 aaPredicted RBP26.41■■□□□ 1.82
NKX2-1-201ENST00000354822 PIGBQ92521 554 aa26.4■■□□□ 1.82
NKX2-1-201ENST00000354822 GTF3C6Q969F1 213 aa26.4■■□□□ 1.82
NKX2-1-201ENST00000354822 SPEF2Q9C093 1822 aa26.4■■□□□ 1.82
NKX2-1-201ENST00000354822 RNF214Q8ND24 703 aa26.4■■□□□ 1.82
NKX2-1-201ENST00000354822 CCDC158Q5M9N0 1113 aa26.39■■□□□ 1.82
NKX2-1-201ENST00000354822 Q6ZUG5 572 aa26.39■■□□□ 1.82
NKX2-1-201ENST00000354822 CCDC9Q9Y3X0 531 aaKnown RBP26.39■■□□□ 1.82
NKX2-1-201ENST00000354822 ELP1O95163 1332 aa26.39■■□□□ 1.81
NKX2-1-201ENST00000354822 RNF113AO15541 343 aaKnown RBP26.39■■□□□ 1.81
NKX2-1-201ENST00000354822 ZBTB38Q8NAP3 1195 aaPredicted RBP26.39■■□□□ 1.81
NKX2-1-201ENST00000354822 NOL7Q9UMY1 257 aaKnown RBP26.39■■□□□ 1.81
NKX2-1-201ENST00000354822 WNK3Q9BYP7 1800 aa26.38■■□□□ 1.81
NKX2-1-201ENST00000354822 LRP6O75581 1613 aa26.38■■□□□ 1.81
NKX2-1-201ENST00000354822 CSF1RP07333 972 aa26.37■■□□□ 1.81
NKX2-1-201ENST00000354822 DHX32Q7L7V1 743 aaKnown RBP26.37■■□□□ 1.81
NKX2-1-201ENST00000354822 DNAJC10Q8IXB1 793 aa26.37■■□□□ 1.81
NKX2-1-201ENST00000354822 ASAP1Q9ULH1 1129 aa26.37■■□□□ 1.81
NKX2-1-201ENST00000354822 CHGBP05060 677 aa26.37■■□□□ 1.81
NKX2-1-201ENST00000354822 CDC37L1Q7L3B6 337 aa26.37■■□□□ 1.81
NKX2-1-201ENST00000354822 PUS3Q9BZE2 481 aaKnown RBP26.37■■□□□ 1.81
NKX2-1-201ENST00000354822 SCAND2PQ9GZW5 306 aaPredicted RBP26.37■■□□□ 1.81
NKX2-1-201ENST00000354822 STK3Q13188 491 aa26.36■■□□□ 1.81
NKX2-1-201ENST00000354822 LLPHQ9BRT6 129 aaKnown RBP26.36■■□□□ 1.81
NKX2-1-201ENST00000354822 CCDC39Q9UFE4 941 aa26.36■■□□□ 1.81
NKX2-1-201ENST00000354822 MCM5P33992 734 aa26.36■■□□□ 1.81
NKX2-1-201ENST00000354822 HSP90AB3PQ58FF7 597 aa26.36■■□□□ 1.81
NKX2-1-201ENST00000354822 HSP90B1P14625 803 aaKnown RBP26.35■■□□□ 1.81
NKX2-1-201ENST00000354822 FGD1P98174 961 aa26.35■■□□□ 1.81
NKX2-1-201ENST00000354822 GORABQ5T7V8 394 aa26.35■■□□□ 1.81
NKX2-1-201ENST00000354822 CHMP4CQ96CF2 233 aa26.35■■□□□ 1.81
NKX2-1-201ENST00000354822 ZNF330Q9Y3S2 320 aaPredicted RBP26.35■■□□□ 1.81
NKX2-1-201ENST00000354822 MAP3K15Q6ZN16 1313 aa26.35■■□□□ 1.81
NKX2-1-201ENST00000354822 EXOC5O00471 708 aa26.34■■□□□ 1.81
NKX2-1-201ENST00000354822 ZFYP08048 801 aaPredicted RBP26.34■■□□□ 1.81
NKX2-1-201ENST00000354822 IFIT5Q13325 482 aaKnown RBP26.34■■□□□ 1.81
NKX2-1-201ENST00000354822 GIGYF2Q6Y7W6 1299 aaKnown RBP26.34■■□□□ 1.81
NKX2-1-201ENST00000354822 HSPD1P10809 573 aaKnown RBP26.34■■□□□ 1.81
NKX2-1-201ENST00000354822 TAF7LQ5H9L4 462 aa26.34■■□□□ 1.81
NKX2-1-201ENST00000354822 CDHR2Q9BYE9 1310 aa26.34■■□□□ 1.81
NKX2-1-201ENST00000354822 PHLPP1O60346 1717 aa26.34■■□□□ 1.81
NKX2-1-201ENST00000354822 TTC39AQ5SRH9 613 aa26.33■■□□□ 1.81
NKX2-1-201ENST00000354822 FAM89AQ96GI7 184 aa26.33■■□□□ 1.81
NKX2-1-201ENST00000354822 ANO8Q9HCE9 1232 aaPredicted RBP26.33■■□□□ 1.81
NKX2-1-201ENST00000354822 ABCC12Q96J65 1359 aa26.33■■□□□ 1.8
NKX2-1-201ENST00000354822 BCL9O00512 1426 aa26.32■■□□□ 1.8
NKX2-1-201ENST00000354822 PFKFB2O60825 505 aa26.32■■□□□ 1.8
NKX2-1-201ENST00000354822 DTNBO60941 627 aa26.32■■□□□ 1.8
NKX2-1-201ENST00000354822 STOX1Q6ZVD7 989 aa26.32■■□□□ 1.8
NKX2-1-201ENST00000354822 XAGE2Q96GT9 111 aa26.32■■□□□ 1.8
NKX2-1-201ENST00000354822 AGXT2Q9BYV1 514 aa26.32■■□□□ 1.8
NKX2-1-201ENST00000354822 EXOSC10Q01780 885 aaKnown RBP26.31■■□□□ 1.8
NKX2-1-201ENST00000354822 FERMT3Q86UX7 667 aa26.31■■□□□ 1.8
NKX2-1-201ENST00000354822 BRF1Q92994 677 aa26.31■■□□□ 1.8
NKX2-1-201ENST00000354822 MAST3O60307 1309 aa26.31■■□□□ 1.8
NKX2-1-201ENST00000354822 TTC6Q86TZ1 520 aa26.31■■□□□ 1.8
NKX2-1-201ENST00000354822 ZSCAN16Q9H4T2 348 aaPredicted RBP26.31■■□□□ 1.8
NKX2-1-201ENST00000354822 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.31■■□□□ 1.8
NKX2-1-201ENST00000354822 CTNNA3Q9UI47 895 aa26.31■■□□□ 1.8
NKX2-1-201ENST00000354822 KIF3AQ9Y496 699 aa26.31■■□□□ 1.8
NKX2-1-201ENST00000354822 FKBP4Q02790 459 aaKnown RBP eCLIP26.3■■□□□ 1.8
NKX2-1-201ENST00000354822 SMARCC2Q8TAQ2 1214 aa26.3■■□□□ 1.8
NKX2-1-201ENST00000354822 NAP1L5Q96NT1 182 aaPredicted RBP26.3■■□□□ 1.8
NKX2-1-201ENST00000354822 NRAPQ86VF7 1730 aa26.29■■□□□ 1.8
NKX2-1-201ENST00000354822 E7EWF7 191 aa26.29■■□□□ 1.8
NKX2-1-201ENST00000354822 CDCA7Q9BWT1 371 aaPredicted RBP26.29■■□□□ 1.8
NKX2-1-201ENST00000354822 ZKSCAN5Q9Y2L8 839 aa26.29■■□□□ 1.8
NKX2-1-201ENST00000354822 HMGN5P82970 282 aaKnown RBP26.29■■□□□ 1.8
NKX2-1-201ENST00000354822 SCRN1Q12765 414 aa26.29■■□□□ 1.8
NKX2-1-201ENST00000354822 FUCA2Q9BTY2 467 aa26.29■■□□□ 1.8
NKX2-1-201ENST00000354822 H3BQV1 296 aa26.28■■□□□ 1.8
NKX2-1-201ENST00000354822 ZNF500O60304 480 aaPredicted RBP26.28■■□□□ 1.8
NKX2-1-201ENST00000354822 IFFO2Q5TF58 517 aa26.28■■□□□ 1.8
NKX2-1-201ENST00000354822 NLRP10Q86W26 655 aa26.28■■□□□ 1.8
NKX2-1-201ENST00000354822 FBXL16Q8N461 479 aa26.28■■□□□ 1.8
NKX2-1-201ENST00000354822 SPATA32Q96LK8 384 aa26.28■■□□□ 1.8
NKX2-1-201ENST00000354822 GOLGA6L4A6NEF3 574 aa26.27■■□□□ 1.8
NKX2-1-201ENST00000354822 JAK2O60674 1132 aa26.27■■□□□ 1.8
NKX2-1-201ENST00000354822 TPRNQ4KMQ1 711 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms