RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 CCDC158Q5M9N0 1113 aa19.98■□□□□ 0.79
SAMM50-201ENST00000350028 ZNF34Q8IZ26 560 aa19.98■□□□□ 0.79
SAMM50-201ENST00000350028 CCDC87Q9NVE4 849 aa19.98■□□□□ 0.79
SAMM50-201ENST00000350028 TRMT112Q9UI30 125 aaKnown RBP19.98■□□□□ 0.79
SAMM50-201ENST00000350028 CCDC9Q9Y3X0 531 aaKnown RBP19.98■□□□□ 0.79
SAMM50-201ENST00000350028 ANKRD18BA2A2Z9 1011 aa19.97■□□□□ 0.79
SAMM50-201ENST00000350028 IRS4O14654 1257 aaPredicted RBP19.97■□□□□ 0.79
SAMM50-201ENST00000350028 PDE8AO60658 829 aa19.97■□□□□ 0.79
SAMM50-201ENST00000350028 ANKRD1Q15327 319 aa19.97■□□□□ 0.79
SAMM50-201ENST00000350028 BLOC1S2Q6QNY1 142 aa19.97■□□□□ 0.79
SAMM50-201ENST00000350028 TBC1D2BQ9UPU7 963 aa19.97■□□□□ 0.79
SAMM50-201ENST00000350028 MYH3P11055 1940 aa19.97■□□□□ 0.79
SAMM50-201ENST00000350028 CICQ96RK0 1608 aaPredicted RBP19.97■□□□□ 0.79
SAMM50-201ENST00000350028 LRRFIP1Q32MZ4 808 aaKnown RBP19.96■□□□□ 0.79
SAMM50-201ENST00000350028 INTS5Q6P9B9 1019 aaKnown RBP19.96■□□□□ 0.79
SAMM50-201ENST00000350028 AK7Q96M32 723 aa19.96■□□□□ 0.79
SAMM50-201ENST00000350028 ATRNO75882 1429 aa19.96■□□□□ 0.79
SAMM50-201ENST00000350028 ATP6V1AP38606 617 aa19.96■□□□□ 0.79
SAMM50-201ENST00000350028 GORABQ5T7V8 394 aa19.96■□□□□ 0.79
SAMM50-201ENST00000350028 SMARCC1Q92922 1105 aaPredicted RBP19.96■□□□□ 0.79
SAMM50-201ENST00000350028 ACSBG1Q96GR2 724 aa19.96■□□□□ 0.79
SAMM50-201ENST00000350028 SMC3Q9UQE7 1217 aa19.96■□□□□ 0.79
SAMM50-201ENST00000350028 RIPOR2Q9Y4F9 1068 aa19.96■□□□□ 0.79
SAMM50-201ENST00000350028 RREB1Q92766 1687 aa19.95■□□□□ 0.78
SAMM50-201ENST00000350028 LOC102724428A0A0B4J2F2 783 aa19.95■□□□□ 0.78
SAMM50-201ENST00000350028 ITGA6P23229 1130 aa19.95■□□□□ 0.78
SAMM50-201ENST00000350028 RPS6KB1P23443 525 aa19.95■□□□□ 0.78
SAMM50-201ENST00000350028 SIK1P57059 783 aa19.95■□□□□ 0.78
SAMM50-201ENST00000350028 TTC39AQ5SRH9 613 aa19.95■□□□□ 0.78
SAMM50-201ENST00000350028 ZMYM1Q5SVZ6 1142 aa19.95■□□□□ 0.78
SAMM50-201ENST00000350028 SYNE4Q8N205 404 aa19.95■□□□□ 0.78
SAMM50-201ENST00000350028 XAGE2Q96GT9 111 aa19.95■□□□□ 0.78
SAMM50-201ENST00000350028 CCDC85AQ96PX6 553 aaPredicted RBP19.95■□□□□ 0.78
SAMM50-201ENST00000350028 ABCC12Q96J65 1359 aa19.94■□□□□ 0.78
SAMM50-201ENST00000350028 LDHAL6AQ6ZMR3 332 aa19.94■□□□□ 0.78
SAMM50-201ENST00000350028 A0A0G2JS52 829 aa19.93■□□□□ 0.78
SAMM50-201ENST00000350028 RNF113AO15541 343 aaKnown RBP19.93■□□□□ 0.78
SAMM50-201ENST00000350028 PRPF40AO75400 957 aaKnown RBP19.93■□□□□ 0.78
SAMM50-201ENST00000350028 CRKLP46109 303 aaKnown RBP19.93■□□□□ 0.78
SAMM50-201ENST00000350028 MRE11P49959 708 aa19.93■□□□□ 0.78
SAMM50-201ENST00000350028 METTL24Q5JXM2 366 aa19.93■□□□□ 0.78
SAMM50-201ENST00000350028 SEC62Q99442 399 aaKnown RBP19.93■□□□□ 0.78
SAMM50-201ENST00000350028 LARP6Q9BRS8 491 aaKnown RBP19.93■□□□□ 0.78
SAMM50-201ENST00000350028 GREM2Q9H772 168 aa19.93■□□□□ 0.78
SAMM50-201ENST00000350028 LARGE1O95461 756 aa19.93■□□□□ 0.78
SAMM50-201ENST00000350028 FOXD4L5Q5VV16 416 aaPredicted RBP19.93■□□□□ 0.78
SAMM50-201ENST00000350028 CCDC129Q6ZRS4 1044 aa19.93■□□□□ 0.78
SAMM50-201ENST00000350028 FOXD4L4Q8WXT5 416 aaPredicted RBP19.93■□□□□ 0.78
SAMM50-201ENST00000350028 DSCC1Q9BVC3 393 aa19.93■□□□□ 0.78
SAMM50-201ENST00000350028 UBN2Q6ZU65 1347 aa19.92■□□□□ 0.78
SAMM50-201ENST00000350028 ADORA1P30542 326 aa19.92■□□□□ 0.78
SAMM50-201ENST00000350028 ATP2B3Q16720 1220 aa19.92■□□□□ 0.78
SAMM50-201ENST00000350028 FAM98CQ17RN3 349 aaKnown RBP19.92■□□□□ 0.78
SAMM50-201ENST00000350028 CCDC83Q8IWF9 413 aa19.92■□□□□ 0.78
SAMM50-201ENST00000350028 CNNM1Q9NRU3 951 aa19.92■□□□□ 0.78
SAMM50-201ENST00000350028 RIC1Q4ADV7 1423 aa19.92■□□□□ 0.78
SAMM50-201ENST00000350028 ZFYP08048 801 aaPredicted RBP19.91■□□□□ 0.78
SAMM50-201ENST00000350028 PDIA4P13667 645 aaKnown RBP19.91■□□□□ 0.78
SAMM50-201ENST00000350028 ME3Q16798 604 aa19.91■□□□□ 0.78
SAMM50-201ENST00000350028 PARP10Q53GL7 1025 aa19.91■□□□□ 0.78
SAMM50-201ENST00000350028 GJD4Q96KN9 370 aaPredicted RBP19.91■□□□□ 0.78
SAMM50-201ENST00000350028 NEK1Q96PY6 1258 aa19.91■□□□□ 0.78
SAMM50-201ENST00000350028 THSD7AQ9UPZ6 1657 aa19.91■□□□□ 0.78
SAMM50-201ENST00000350028 CHGBP05060 677 aa19.9■□□□□ 0.78
SAMM50-201ENST00000350028 XRCC6P12956 609 aaKnown RBP eCLIP19.9■□□□□ 0.78
SAMM50-201ENST00000350028 TPCN1Q9ULQ1 816 aa19.9■□□□□ 0.78
SAMM50-201ENST00000350028 STX6O43752 255 aa19.9■□□□□ 0.78
SAMM50-201ENST00000350028 ZSCAN22P10073 491 aaPredicted RBP19.9■□□□□ 0.78
SAMM50-201ENST00000350028 ITPK1Q13572 414 aa19.9■□□□□ 0.78
SAMM50-201ENST00000350028 ZNF512BQ96KM6 892 aaPredicted RBP19.9■□□□□ 0.78
SAMM50-201ENST00000350028 BRPF3Q9ULD4 1205 aa19.9■□□□□ 0.78
SAMM50-201ENST00000350028 TAF6LQ9Y6J9 622 aa19.9■□□□□ 0.78
SAMM50-201ENST00000350028 CAMTA2O94983 1202 aa19.89■□□□□ 0.77
SAMM50-201ENST00000350028 HSP90B1P14625 803 aaKnown RBP19.89■□□□□ 0.77
SAMM50-201ENST00000350028 NCLP19338 710 aaKnown RBP19.89■□□□□ 0.77
SAMM50-201ENST00000350028 SYT1P21579 422 aa19.89■□□□□ 0.77
SAMM50-201ENST00000350028 FKBP4Q02790 459 aaKnown RBP eCLIP19.89■□□□□ 0.77
SAMM50-201ENST00000350028 SUSD4Q5VX71 490 aa19.89■□□□□ 0.77
SAMM50-201ENST00000350028 UTP14AQ9BVJ6 771 aaKnown RBP19.89■□□□□ 0.77
SAMM50-201ENST00000350028 TRPC5Q9UL62 973 aaPredicted RBP19.89■□□□□ 0.77
SAMM50-201ENST00000350028 ZNF831Q5JPB2 1677 aa19.88■□□□□ 0.77
SAMM50-201ENST00000350028 MBD3O95983 291 aa19.88■□□□□ 0.77
SAMM50-201ENST00000350028 CYP21A2P08686 494 aa19.88■□□□□ 0.77
SAMM50-201ENST00000350028 HMGB1P09429 215 aaKnown RBP19.88■□□□□ 0.77
SAMM50-201ENST00000350028 GJB2P29033 226 aa19.88■□□□□ 0.77
SAMM50-201ENST00000350028 QTRT2Q9H974 415 aaKnown RBP19.88■□□□□ 0.77
SAMM50-201ENST00000350028 GRPEL1Q9HAV7 217 aa19.88■□□□□ 0.77
SAMM50-201ENST00000350028 RGS17Q9UGC6 210 aaPredicted RBP19.88■□□□□ 0.77
SAMM50-201ENST00000350028 TOB2Q14106 344 aaPredicted RBP19.88■□□□□ 0.77
SAMM50-201ENST00000350028 VGLL2Q8N8G2 317 aa19.88■□□□□ 0.77
SAMM50-201ENST00000350028 ATP6V1DQ9Y5K8 247 aa19.88■□□□□ 0.77
SAMM50-201ENST00000350028 MAST3O60307 1309 aa19.87■□□□□ 0.77
SAMM50-201ENST00000350028 PDE8BO95263 885 aa19.87■□□□□ 0.77
SAMM50-201ENST00000350028 ZNF445P59923 1031 aa19.87■□□□□ 0.77
SAMM50-201ENST00000350028 ST3GAL1Q11201 340 aa19.87■□□□□ 0.77
SAMM50-201ENST00000350028 MROH5Q6ZUA9 1318 aa19.86■□□□□ 0.77
SAMM50-201ENST00000350028 HSPD1P10809 573 aaKnown RBP19.86■□□□□ 0.77
SAMM50-201ENST00000350028 ZAP70P43403 619 aa19.86■□□□□ 0.77
SAMM50-201ENST00000350028 GPT2Q8TD30 523 aa19.86■□□□□ 0.77
SAMM50-201ENST00000350028 LRP5O75197 1615 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms