RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 DOK7Q18PE1 504 aa6.97□□□□□ -1.29
RFC1-201ENST00000349703 C22orf23Q9BZE7 217 aa6.97□□□□□ -1.29
RFC1-201ENST00000349703 PITPNM1O00562 1244 aa6.97□□□□□ -1.29
RFC1-201ENST00000349703 ZNF157P51786 506 aaPredicted RBP6.97□□□□□ -1.29
RFC1-201ENST00000349703 SLC7A3Q8WY07 619 aa6.97□□□□□ -1.29
RFC1-201ENST00000349703 EDEM1Q92611 657 aa6.97□□□□□ -1.29
RFC1-201ENST00000349703 SYMPKQ92797 1274 aaKnown RBP6.97□□□□□ -1.29
RFC1-201ENST00000349703 PABPN1LA6NDY0 278 aaKnown RBP6.97□□□□□ -1.29
RFC1-201ENST00000349703 CCDC150Q8NCX0 1101 aa6.97□□□□□ -1.29
RFC1-201ENST00000349703 OCEL1Q9H607 264 aa6.97□□□□□ -1.29
RFC1-201ENST00000349703 POLMQ9NP87 494 aaPredicted RBP6.97□□□□□ -1.29
RFC1-201ENST00000349703 SFMBT1Q9UHJ3 866 aa6.97□□□□□ -1.29
RFC1-201ENST00000349703 DDX49Q9Y6V7 483 aaKnown RBP6.97□□□□□ -1.29
RFC1-201ENST00000349703 ABCA5Q8WWZ7 1642 aa6.97□□□□□ -1.29
RFC1-201ENST00000349703 KIAA1107Q9UPP5 1409 aa6.97□□□□□ -1.29
RFC1-201ENST00000349703 XRCC6P12956 609 aaKnown RBP eCLIP6.96□□□□□ -1.29
RFC1-201ENST00000349703 PASD1Q8IV76 773 aa6.96□□□□□ -1.29
RFC1-201ENST00000349703 ARIH1Q9Y4X5 557 aaPredicted RBP6.96□□□□□ -1.29
RFC1-201ENST00000349703 NCKAP5LQ9HCH0 1330 aa6.96□□□□□ -1.29
RFC1-201ENST00000349703 DHX29Q7Z478 1369 aaKnown RBP6.96□□□□□ -1.29
RFC1-201ENST00000349703 RDXP35241 583 aaKnown RBP6.96□□□□□ -1.29
RFC1-201ENST00000349703 ATP6V1AP38606 617 aa6.96□□□□□ -1.29
RFC1-201ENST00000349703 SCNN1BP51168 640 aa6.96□□□□□ -1.29
RFC1-201ENST00000349703 ANO6Q4KMQ2 910 aa6.96□□□□□ -1.29
RFC1-201ENST00000349703 PPP1R18Q6NYC8 613 aa6.96□□□□□ -1.29
RFC1-201ENST00000349703 KIAA0825Q8IV33 1275 aa6.96□□□□□ -1.29
RFC1-201ENST00000349703 NEUROD6Q96NK8 337 aa6.96□□□□□ -1.29
RFC1-201ENST00000349703 PPP2R3AQ06190 1150 aa6.96□□□□□ -1.3
RFC1-201ENST00000349703 SWT1Q5T5J6 900 aaKnown RBP6.96□□□□□ -1.3
RFC1-201ENST00000349703 CCDC70Q6NSX1 233 aa6.96□□□□□ -1.3
RFC1-201ENST00000349703 RSBN1LQ6PCB5 846 aaPredicted RBP6.96□□□□□ -1.3
RFC1-201ENST00000349703 CCDC81Q6ZN84 652 aa6.96□□□□□ -1.3
RFC1-201ENST00000349703 CCDC89Q8N998 374 aa6.96□□□□□ -1.3
RFC1-201ENST00000349703 CFTRP13569 1480 aa6.96□□□□□ -1.3
RFC1-201ENST00000349703 TNNT3P45378 269 aaPredicted RBP6.96□□□□□ -1.3
RFC1-201ENST00000349703 ELF2Q15723 593 aa6.96□□□□□ -1.3
RFC1-201ENST00000349703 NBPF10Q6P3W6 841 aaKnown RBP6.96□□□□□ -1.3
RFC1-201ENST00000349703 MTMR14Q8NCE2 650 aa6.96□□□□□ -1.3
RFC1-201ENST00000349703 LZTS3O60299 673 aaPredicted RBP6.95□□□□□ -1.3
RFC1-201ENST00000349703 GHRHP01286 108 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 RPLP1P05386 114 aaKnown RBP6.95□□□□□ -1.3
RFC1-201ENST00000349703 HCLS1P14317 486 aaPredicted RBP6.95□□□□□ -1.3
RFC1-201ENST00000349703 ERC1Q8IUD2 1116 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 LBHD1Q9BQE6 289 aaPredicted RBP6.95□□□□□ -1.3
RFC1-201ENST00000349703 LNPKQ9C0E8 428 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 RASSF10A6NK89 507 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 MAPK10P53779 464 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 HIF1AQ16665 826 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 TCERG1LQ5VWI1 586 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 SPTY2D1Q68D10 685 aaPredicted RBP6.95□□□□□ -1.3
RFC1-201ENST00000349703 PGM2L1Q6PCE3 622 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 DRC7Q8IY82 874 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 RNF39Q9H2S5 420 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 FBRSQ9HAH7 460 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 ARFGAP3Q9NP61 516 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 HMGXB3Q12766 1538 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 NUP155O75694 1391 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 MYBL2P10244 700 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 KRT20P35900 424 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 TRAPPC10P48553 1259 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 RNASELQ05823 741 aaKnown RBP6.95□□□□□ -1.3
RFC1-201ENST00000349703 LRSAM1Q6UWE0 723 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 KIF1BPQ96EK5 621 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 RPS6KC1Q96S38 1066 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 SEPT3Q9UH03 358 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 MPSTP25325 297 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 MCM5P33992 734 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 ST5P78524 1137 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 SEZ6Q53EL9 994 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 CHPF2Q9P2E5 772 aa6.95□□□□□ -1.3
RFC1-201ENST00000349703 CUL7Q14999 1698 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 SOWAHDA6NJG2 315 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 RNGTTO60942 597 aaKnown RBP6.94□□□□□ -1.3
RFC1-201ENST00000349703 PYGMP11217 842 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 RAG1P15918 1043 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 C6orf132Q5T0Z8 1188 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 ISM2Q6H9L7 571 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 ANKRD13DQ6ZTN6 518 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 GAS2L2Q8NHY3 880 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 ATG7O95352 703 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 NUCB2P80303 420 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 SEPT6Q14141 434 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 TTC30AQ86WT1 665 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 DSCC1Q9BVC3 393 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 PANK3Q9H999 370 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 MRPL42Q9Y6G3 142 aaKnown RBP6.94□□□□□ -1.3
RFC1-201ENST00000349703 KDM2BQ8NHM5 1336 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 GCC2Q8IWJ2 1684 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 hCG_1642624A0A1W2PR95 340 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 IQCA1LA6NCM1 817 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 DYNC1I1O14576 645 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 ZRANB2O95218 330 aaKnown RBP eCLIP6.94□□□□□ -1.3
RFC1-201ENST00000349703 PRSS12P56730 875 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 CEP135Q66GS9 1140 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 NBPF15Q8N660 670 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 TRIML1Q8N9V2 468 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 JAKMIP2Q96AA8 810 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 GAS2L1Q99501 681 aaPredicted RBP6.94□□□□□ -1.3
RFC1-201ENST00000349703 TCOF1Q13428 1488 aaKnown RBP6.94□□□□□ -1.3
RFC1-201ENST00000349703 UQCRHLA0A096LP55 91 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms