RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 MASTLQ96GX5 879 aa33.37■■■□□ 2.93
SSBP4-202ENST00000348495 MROH5Q6ZUA9 1318 aa33.37■■■□□ 2.93
SSBP4-202ENST00000348495 CEP126Q9P2H0 1117 aa33.36■■■□□ 2.93
SSBP4-202ENST00000348495 H0YIN7 160 aa33.36■■■□□ 2.93
SSBP4-202ENST00000348495 CLASRPQ8N2M8 674 aaKnown RBP33.36■■■□□ 2.93
SSBP4-202ENST00000348495 GPR108Q9NPR9 543 aa33.36■■■□□ 2.93
SSBP4-202ENST00000348495 METTL24Q5JXM2 366 aa33.34■■■□□ 2.93
SSBP4-202ENST00000348495 STYK1Q6J9G0 422 aa33.34■■■□□ 2.93
SSBP4-202ENST00000348495 EAF2Q96CJ1 260 aaPredicted RBP33.34■■■□□ 2.93
SSBP4-202ENST00000348495 SALL3Q9BXA9 1300 aa33.34■■■□□ 2.93
SSBP4-202ENST00000348495 BBOX1O75936 387 aa33.33■■■□□ 2.93
SSBP4-202ENST00000348495 OTUD7AQ8TE49 926 aaPredicted RBP33.33■■■□□ 2.93
SSBP4-202ENST00000348495 MINPP1Q9UNW1 487 aa33.33■■■□□ 2.93
SSBP4-202ENST00000348495 CHRNA5P30532 468 aa33.33■■■□□ 2.93
SSBP4-202ENST00000348495 TNNI3KQ59H18 835 aa33.33■■■□□ 2.93
SSBP4-202ENST00000348495 SPON1Q9HCB6 807 aa33.33■■■□□ 2.93
SSBP4-202ENST00000348495 FPGT-TNNI3KV9GXZ4 949 aa33.33■■■□□ 2.93
SSBP4-202ENST00000348495 A0A1B0GUL6 1792 aa33.33■■■□□ 2.93
SSBP4-202ENST00000348495 DLEC1Q9Y238 1755 aa33.33■■■□□ 2.93
SSBP4-202ENST00000348495 ALDH1B1P30837 517 aa33.32■■■□□ 2.92
SSBP4-202ENST00000348495 CHRNDQ07001 517 aa33.32■■■□□ 2.92
SSBP4-202ENST00000348495 KIAA1551Q9HCM1 1747 aa33.31■■■□□ 2.92
SSBP4-202ENST00000348495 PDE8BO95263 885 aa33.31■■■□□ 2.92
SSBP4-202ENST00000348495 BCL11AQ9H165 835 aa33.31■■■□□ 2.92
SSBP4-202ENST00000348495 RGS3P49796 1198 aa33.31■■■□□ 2.92
SSBP4-202ENST00000348495 AACSQ86V21 672 aa33.31■■■□□ 2.92
SSBP4-202ENST00000348495 ZNF609O15014 1411 aa33.3■■■□□ 2.92
SSBP4-202ENST00000348495 PLEKHM2Q8IWE5 1019 aa33.3■■■□□ 2.92
SSBP4-202ENST00000348495 TMC4Q7Z404 712 aa33.29■■■□□ 2.92
SSBP4-202ENST00000348495 HELBQ8NG08 1087 aaPredicted RBP33.28■■■□□ 2.92
SSBP4-202ENST00000348495 AKAP2Q9Y2D5 859 aa33.28■■■□□ 2.92
SSBP4-202ENST00000348495 LRRC37AA6NMS7 1700 aa33.28■■■□□ 2.92
SSBP4-202ENST00000348495 TGFB2P61812 414 aa33.28■■■□□ 2.92
SSBP4-202ENST00000348495 ZNF622Q969S3 477 aaKnown RBP eCLIP33.28■■■□□ 2.92
SSBP4-202ENST00000348495 CD2APQ9Y5K6 639 aa33.28■■■□□ 2.92
SSBP4-202ENST00000348495 KCNA3P22001 575 aa33.27■■■□□ 2.92
SSBP4-202ENST00000348495 TAF5LO75529 589 aa33.26■■■□□ 2.92
SSBP4-202ENST00000348495 FGFR2P21802 821 aa33.26■■■□□ 2.92
SSBP4-202ENST00000348495 CNKSR1Q969H4 720 aa33.26■■■□□ 2.92
SSBP4-202ENST00000348495 A0A1B0GUL7 405 aa33.25■■■□□ 2.91
SSBP4-202ENST00000348495 PPEF1O14829 653 aaPredicted RBP33.25■■■□□ 2.91
SSBP4-202ENST00000348495 IFIT2P09913 472 aaKnown RBP33.25■■■□□ 2.91
SSBP4-202ENST00000348495 MX1P20591 662 aa33.25■■■□□ 2.91
SSBP4-202ENST00000348495 SLC51AQ86UW1 340 aa33.25■■■□□ 2.91
SSBP4-202ENST00000348495 ANKRD2Q9GZV1 360 aa33.25■■■□□ 2.91
SSBP4-202ENST00000348495 CCDC8Q9H0W5 538 aaPredicted RBP33.25■■■□□ 2.91
SSBP4-202ENST00000348495 TLR7Q9NYK1 1049 aaKnown RBP33.25■■■□□ 2.91
SSBP4-202ENST00000348495 STAP2Q9UGK3 403 aa33.25■■■□□ 2.91
SSBP4-202ENST00000348495 DPEP1P16444 411 aa33.25■■■□□ 2.91
SSBP4-202ENST00000348495 TIMM10P62072 90 aa33.25■■■□□ 2.91
SSBP4-202ENST00000348495 PUM3Q15397 648 aaKnown RBP33.25■■■□□ 2.91
SSBP4-202ENST00000348495 ATP2B3Q16720 1220 aa33.25■■■□□ 2.91
SSBP4-202ENST00000348495 OSBPL3Q9H4L5 887 aa33.25■■■□□ 2.91
SSBP4-202ENST00000348495 DBNLQ9UJU6 430 aaKnown RBP33.25■■■□□ 2.91
SSBP4-202ENST00000348495 PDE1AP54750 535 aa33.24■■■□□ 2.91
SSBP4-202ENST00000348495 SP8Q8IXZ3 490 aa33.24■■■□□ 2.91
SSBP4-202ENST00000348495 ATP6V0A2Q9Y487 856 aa33.24■■■□□ 2.91
SSBP4-202ENST00000348495 A0A0G2JLW4 131 aa33.23■■■□□ 2.91
SSBP4-202ENST00000348495 PRPF40BQ6NWY9 871 aaKnown RBP33.22■■■□□ 2.91
SSBP4-202ENST00000348495 SLX4Q8IY92 1834 aa33.22■■■□□ 2.91
SSBP4-202ENST00000348495 CACNA1SQ13698 1873 aa33.22■■■□□ 2.91
SSBP4-202ENST00000348495 LPIN2Q92539 896 aa33.22■■■□□ 2.91
SSBP4-202ENST00000348495 DBNDD2Q9BQY9 259 aa33.22■■■□□ 2.91
SSBP4-202ENST00000348495 ARAP2Q8WZ64 1704 aa33.21■■■□□ 2.91
SSBP4-202ENST00000348495 SNAP23O00161 211 aa33.2■■■□□ 2.91
SSBP4-202ENST00000348495 NEUROD6Q96NK8 337 aa33.2■■■□□ 2.91
SSBP4-202ENST00000348495 LTBP1Q14766 1721 aa33.2■■■□□ 2.91
SSBP4-202ENST00000348495 UBE4AQ14139 1066 aa33.19■■■□□ 2.9
SSBP4-202ENST00000348495 AOX1Q06278 1338 aa33.19■■■□□ 2.9
SSBP4-202ENST00000348495 XAGE2Q96GT9 111 aa33.19■■■□□ 2.9
SSBP4-202ENST00000348495 XDHP47989 1333 aa33.19■■■□□ 2.9
SSBP4-202ENST00000348495 TTC41PQ6P2S7 1318 aa33.19■■■□□ 2.9
SSBP4-202ENST00000348495 C7orf43Q8WVR3 580 aa33.18■■■□□ 2.9
SSBP4-202ENST00000348495 ECHDC1Q9NTX5 307 aa33.18■■■□□ 2.9
SSBP4-202ENST00000348495 PODXL2Q9NZ53 605 aa33.18■■■□□ 2.9
SSBP4-202ENST00000348495 WTIPA6NIX2 430 aaPredicted RBP33.17■■■□□ 2.9
SSBP4-202ENST00000348495 ADORA1P30542 326 aa33.17■■■□□ 2.9
SSBP4-202ENST00000348495 GPSM2P81274 684 aa33.17■■■□□ 2.9
SSBP4-202ENST00000348495 TSHZ3Q63HK5 1081 aa33.17■■■□□ 2.9
SSBP4-202ENST00000348495 TTLL6Q8N841 843 aa33.17■■■□□ 2.9
SSBP4-202ENST00000348495 PPP1R1BQ9UD71 204 aaPredicted RBP33.17■■■□□ 2.9
SSBP4-202ENST00000348495 BRCA1P38398 1863 aaKnown RBP33.17■■■□□ 2.9
SSBP4-202ENST00000348495 SLC5A1P13866 664 aa33.16■■■□□ 2.9
SSBP4-202ENST00000348495 PI4K2BQ8TCG2 481 aa33.16■■■□□ 2.9
SSBP4-202ENST00000348495 GPATCH3Q96I76 525 aa33.16■■■□□ 2.9
SSBP4-202ENST00000348495 ANKIB1Q9P2G1 1089 aa33.16■■■□□ 2.9
SSBP4-202ENST00000348495 LEMD3Q9Y2U8 911 aa33.15■■■□□ 2.9
SSBP4-202ENST00000348495 ZNF804BA4D1E1 1349 aa33.14■■■□□ 2.9
SSBP4-202ENST00000348495 OLFM4Q6UX06 510 aa33.14■■■□□ 2.9
SSBP4-202ENST00000348495 IFIT1P09914 478 aaKnown RBP33.14■■■□□ 2.89
SSBP4-202ENST00000348495 TTC22Q5TAA0 569 aa33.14■■■□□ 2.89
SSBP4-202ENST00000348495 KLHL34Q8N239 644 aa33.14■■■□□ 2.89
SSBP4-202ENST00000348495 NSFL1CQ9UNZ2 370 aaKnown RBP33.14■■■□□ 2.89
SSBP4-202ENST00000348495 IRS2Q9Y4H2 1338 aa33.13■■■□□ 2.89
SSBP4-202ENST00000348495 PIM2Q9P1W9 311 aa33.13■■■□□ 2.89
SSBP4-202ENST00000348495 SNED1Q8TER0 1413 aa33.12■■■□□ 2.89
SSBP4-202ENST00000348495 KCNJ4P48050 445 aa33.11■■■□□ 2.89
SSBP4-202ENST00000348495 DUOX1Q9NRD9 1551 aa33.11■■■□□ 2.89
SSBP4-202ENST00000348495 GLRX3O76003 335 aaKnown RBP33.11■■■□□ 2.89
SSBP4-202ENST00000348495 GSPT1P15170 499 aaKnown RBP33.11■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms