RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 RIMBP2O15034 1052 aa19.88■□□□□ 0.77
TSPAN4-201ENST00000346501 CSF1RP07333 972 aa19.88■□□□□ 0.77
TSPAN4-201ENST00000346501 CIAPIN1Q6FI81 312 aa19.88■□□□□ 0.77
TSPAN4-201ENST00000346501 SLC51AQ86UW1 340 aa19.88■□□□□ 0.77
TSPAN4-201ENST00000346501 TBC1D16Q8TBP0 767 aa19.88■□□□□ 0.77
TSPAN4-201ENST00000346501 LRRC37AA6NMS7 1700 aa19.88■□□□□ 0.77
TSPAN4-201ENST00000346501 IPO8O15397 1037 aaKnown RBP19.87■□□□□ 0.77
TSPAN4-201ENST00000346501 FAM161AQ3B820 660 aa19.87■□□□□ 0.77
TSPAN4-201ENST00000346501 EAPPQ56P03 285 aaPredicted RBP19.87■□□□□ 0.77
TSPAN4-201ENST00000346501 ANKRD2Q9GZV1 360 aa19.87■□□□□ 0.77
TSPAN4-201ENST00000346501 POLLQ9UGP5 575 aa19.87■□□□□ 0.77
TSPAN4-201ENST00000346501 HDAC5Q9UQL6 1122 aa19.87■□□□□ 0.77
TSPAN4-201ENST00000346501 POTECB2RU33 542 aa19.86■□□□□ 0.77
TSPAN4-201ENST00000346501 EPHX2P34913 555 aa19.86■□□□□ 0.77
TSPAN4-201ENST00000346501 CCT4P50991 539 aaKnown RBP19.86■□□□□ 0.77
TSPAN4-201ENST00000346501 APLP1P51693 650 aa19.86■□□□□ 0.77
TSPAN4-201ENST00000346501 LMBR1LQ6UX01 489 aa19.86■□□□□ 0.77
TSPAN4-201ENST00000346501 TAF1DQ9H5J8 278 aaPredicted RBP19.86■□□□□ 0.77
TSPAN4-201ENST00000346501 CLEC11AQ9Y240 323 aa19.86■□□□□ 0.77
TSPAN4-201ENST00000346501 SCN4AP35499 1836 aa19.86■□□□□ 0.77
TSPAN4-201ENST00000346501 KCNJ4P48050 445 aa19.85■□□□□ 0.77
TSPAN4-201ENST00000346501 BRPF1P55201 1214 aaPredicted RBP19.85■□□□□ 0.77
TSPAN4-201ENST00000346501 CXCL9Q07325 125 aa19.85■□□□□ 0.77
TSPAN4-201ENST00000346501 LDHDQ86WU2 507 aa19.85■□□□□ 0.77
TSPAN4-201ENST00000346501 NOB1Q9ULX3 412 aaKnown RBP19.85■□□□□ 0.77
TSPAN4-201ENST00000346501 MINPP1Q9UNW1 487 aa19.85■□□□□ 0.77
TSPAN4-201ENST00000346501 RARSP54136 660 aaKnown RBP19.84■□□□□ 0.77
TSPAN4-201ENST00000346501 FOXO4P98177 505 aa19.84■□□□□ 0.77
TSPAN4-201ENST00000346501 CHADLQ6NUI6 762 aa19.84■□□□□ 0.77
TSPAN4-201ENST00000346501 DBNDD1Q9H9R9 158 aa19.84■□□□□ 0.77
TSPAN4-201ENST00000346501 LEMD3Q9Y2U8 911 aa19.84■□□□□ 0.77
TSPAN4-201ENST00000346501 ZBED9Q6R2W3 1325 aa19.83■□□□□ 0.77
TSPAN4-201ENST00000346501 RAD17O75943 681 aa19.83■□□□□ 0.77
TSPAN4-201ENST00000346501 ECE2O60344 883 aa19.82■□□□□ 0.76
TSPAN4-201ENST00000346501 DOK7Q18PE1 504 aa19.82■□□□□ 0.76
TSPAN4-201ENST00000346501 ARHGAP45Q92619 1136 aa19.82■□□□□ 0.76
TSPAN4-201ENST00000346501 UTYO14607 1347 aa19.81■□□□□ 0.76
TSPAN4-201ENST00000346501 NBPF7P0C2Y1 421 aaPredicted RBP19.81■□□□□ 0.76
TSPAN4-201ENST00000346501 LDHAL6AQ6ZMR3 332 aa19.81■□□□□ 0.76
TSPAN4-201ENST00000346501 CNNM1Q9NRU3 951 aa19.81■□□□□ 0.76
TSPAN4-201ENST00000346501 DUOX1Q9NRD9 1551 aa19.81■□□□□ 0.76
TSPAN4-201ENST00000346501 COL4A5P29400 1685 aa19.81■□□□□ 0.76
TSPAN4-201ENST00000346501 H7C1D1 291 aa19.8■□□□□ 0.76
TSPAN4-201ENST00000346501 USP50Q70EL3 339 aaPredicted RBP19.8■□□□□ 0.76
TSPAN4-201ENST00000346501 SUCLG2Q96I99 432 aa19.8■□□□□ 0.76
TSPAN4-201ENST00000346501 GPR101Q96P66 508 aaPredicted RBP19.8■□□□□ 0.76
TSPAN4-201ENST00000346501 ADARB2Q9NS39 739 aaKnown RBP19.8■□□□□ 0.76
TSPAN4-201ENST00000346501 GPRC5DQ9NZD1 345 aa19.8■□□□□ 0.76
TSPAN4-201ENST00000346501 UBTFL1P0CB47 393 aaPredicted RBP19.79■□□□□ 0.76
TSPAN4-201ENST00000346501 RPS12P25398 132 aaKnown RBP19.79■□□□□ 0.76
TSPAN4-201ENST00000346501 GMPSP49915 693 aaPredicted RBP19.79■□□□□ 0.76
TSPAN4-201ENST00000346501 SCNN1DP51172 638 aa19.79■□□□□ 0.76
TSPAN4-201ENST00000346501 PODNQ7Z5L7 613 aa19.79■□□□□ 0.76
TSPAN4-201ENST00000346501 FRAT1Q92837 279 aaPredicted RBP19.79■□□□□ 0.76
TSPAN4-201ENST00000346501 ZNF804BA4D1E1 1349 aa19.78■□□□□ 0.76
TSPAN4-201ENST00000346501 YDJCA8MPS7 323 aa19.78■□□□□ 0.76
TSPAN4-201ENST00000346501 EPS15P42566 896 aa19.78■□□□□ 0.76
TSPAN4-201ENST00000346501 CHRNDQ07001 517 aa19.78■□□□□ 0.76
TSPAN4-201ENST00000346501 EPHA10Q5JZY3 1008 aa19.78■□□□□ 0.76
TSPAN4-201ENST00000346501 BICC1Q9H694 974 aaKnown RBP19.78■□□□□ 0.76
TSPAN4-201ENST00000346501 MED23Q9ULK4 1368 aa19.78■□□□□ 0.76
TSPAN4-201ENST00000346501 COL4A1P02462 1669 aa19.78■□□□□ 0.76
TSPAN4-201ENST00000346501 PSMD14O00487 310 aa19.77■□□□□ 0.76
TSPAN4-201ENST00000346501 DPF2Q92785 391 aa19.77■□□□□ 0.76
TSPAN4-201ENST00000346501 USP44Q9H0E7 712 aa19.77■□□□□ 0.76
TSPAN4-201ENST00000346501 COA1Q9GZY4 146 aa19.76■□□□□ 0.75
TSPAN4-201ENST00000346501 CNOT7Q9UIV1 285 aaKnown RBP19.76■□□□□ 0.75
TSPAN4-201ENST00000346501 SPEF2Q9C093 1822 aa19.76■□□□□ 0.75
TSPAN4-201ENST00000346501 PLIN1O60240 522 aa19.75■□□□□ 0.75
TSPAN4-201ENST00000346501 POTEIP0CG38 1075 aa19.75■□□□□ 0.75
TSPAN4-201ENST00000346501 POTEJP0CG39 1038 aa19.75■□□□□ 0.75
TSPAN4-201ENST00000346501 RABL6Q3YEC7 729 aaPredicted RBP19.75■□□□□ 0.75
TSPAN4-201ENST00000346501 LTBP1Q14766 1721 aa19.75■□□□□ 0.75
TSPAN4-201ENST00000346501 GNAI3P08754 354 aa19.74■□□□□ 0.75
TSPAN4-201ENST00000346501 ZKSCAN2Q63HK3 967 aa19.74■□□□□ 0.75
TSPAN4-201ENST00000346501 ATF7IPQ6VMQ6 1270 aa19.74■□□□□ 0.75
TSPAN4-201ENST00000346501 MICALL2Q8IY33 904 aa19.74■□□□□ 0.75
TSPAN4-201ENST00000346501 ZNF594Q96JF6 807 aaPredicted RBP19.74■□□□□ 0.75
TSPAN4-201ENST00000346501 USP17L3A6NCW0 530 aa19.73■□□□□ 0.75
TSPAN4-201ENST00000346501 USP17L4A6NCW7 530 aa19.73■□□□□ 0.75
TSPAN4-201ENST00000346501 VIL1P09327 827 aaKnown RBP19.73■□□□□ 0.75
TSPAN4-201ENST00000346501 USP17L1Q7RTZ2 530 aa19.73■□□□□ 0.75
TSPAN4-201ENST00000346501 CNTROBQ8N137 903 aa19.73■□□□□ 0.75
TSPAN4-201ENST00000346501 HELBQ8NG08 1087 aaPredicted RBP19.73■□□□□ 0.75
TSPAN4-201ENST00000346501 FBXW7Q969H0 707 aa19.73■□□□□ 0.75
TSPAN4-201ENST00000346501 ZBTB12Q9Y330 459 aaPredicted RBP19.73■□□□□ 0.75
TSPAN4-201ENST00000346501 MROH5Q6ZUA9 1318 aa19.73■□□□□ 0.75
TSPAN4-201ENST00000346501 TAF5LO75529 589 aa19.72■□□□□ 0.75
TSPAN4-201ENST00000346501 BCAR3O75815 825 aa19.72■□□□□ 0.75
TSPAN4-201ENST00000346501 INTS3Q68E01 1043 aaKnown RBP19.72■□□□□ 0.75
TSPAN4-201ENST00000346501 ZNF804AQ7Z570 1209 aa19.72■□□□□ 0.75
TSPAN4-201ENST00000346501 AGBL3Q8NEM8 1001 aa19.72■□□□□ 0.75
TSPAN4-201ENST00000346501 KAZALD1Q96I82 304 aa19.72■□□□□ 0.75
TSPAN4-201ENST00000346501 MAP1SQ66K74 1059 aaPredicted RBP19.71■□□□□ 0.75
TSPAN4-201ENST00000346501 RSBN1LQ6PCB5 846 aaPredicted RBP19.71■□□□□ 0.75
TSPAN4-201ENST00000346501 FTSJ3Q8IY81 847 aaKnown RBP19.71■□□□□ 0.75
TSPAN4-201ENST00000346501 ZC3H15Q8WU90 426 aaKnown RBP19.71■□□□□ 0.75
TSPAN4-201ENST00000346501 MYO3BQ8WXR4 1341 aa19.71■□□□□ 0.75
TSPAN4-201ENST00000346501 UBE4AQ14139 1066 aa19.7■□□□□ 0.74
TSPAN4-201ENST00000346501 METTL24Q5JXM2 366 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms