RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 C14orf93Q9H972 538 aaKnown RBP19.9■□□□□ 0.78
SPAST-202ENST00000345662 GUCA1BQ9UMX6 200 aa19.9■□□□□ 0.78
SPAST-202ENST00000345662 ZBTB7BO15156 539 aaPredicted RBP19.9■□□□□ 0.78
SPAST-202ENST00000345662 MYL5Q02045 173 aa19.9■□□□□ 0.78
SPAST-202ENST00000345662 FAM160A1Q05DH4 1040 aa19.9■□□□□ 0.78
SPAST-202ENST00000345662 KIAA0753Q2KHM9 967 aa19.9■□□□□ 0.78
SPAST-202ENST00000345662 MCMDC2Q4G0Z9 681 aa19.9■□□□□ 0.78
SPAST-202ENST00000345662 DDX46Q7L014 1031 aaKnown RBP19.9■□□□□ 0.78
SPAST-202ENST00000345662 AFAP1L1Q8TED9 768 aa19.9■□□□□ 0.78
SPAST-202ENST00000345662 UBA5Q9GZZ9 404 aa19.9■□□□□ 0.78
SPAST-202ENST00000345662 CBX8Q9HC52 389 aa19.9■□□□□ 0.78
SPAST-202ENST00000345662 FSD2A1L4K1 749 aa19.9■□□□□ 0.78
SPAST-202ENST00000345662 FBF1Q8TES7 1133 aa19.9■□□□□ 0.78
SPAST-202ENST00000345662 NMIQ13287 307 aaPredicted RBP19.9■□□□□ 0.78
SPAST-202ENST00000345662 C6orf163Q5TEZ5 329 aa19.9■□□□□ 0.78
SPAST-202ENST00000345662 CCDC129Q6ZRS4 1044 aa19.9■□□□□ 0.78
SPAST-202ENST00000345662 PPM1EQ8WY54 764 aa19.9■□□□□ 0.78
SPAST-202ENST00000345662 CAPZA3Q96KX2 299 aa19.9■□□□□ 0.78
SPAST-202ENST00000345662 CLSTN2Q9H4D0 955 aa19.9■□□□□ 0.78
SPAST-202ENST00000345662 TSC1Q92574 1164 aa19.9■□□□□ 0.78
SPAST-202ENST00000345662 ZBTB9Q96C00 473 aa19.9■□□□□ 0.78
SPAST-202ENST00000345662 TESK2Q96S53 571 aa19.9■□□□□ 0.78
SPAST-202ENST00000345662 CARD6Q9BX69 1037 aa19.9■□□□□ 0.78
SPAST-202ENST00000345662 KCNH5Q8NCM2 988 aa19.89■□□□□ 0.78
SPAST-202ENST00000345662 VAV2P52735 878 aa19.89■□□□□ 0.77
SPAST-202ENST00000345662 TTF1Q15361 905 aaPredicted RBP19.89■□□□□ 0.77
SPAST-202ENST00000345662 VGLL3A8MV65 326 aa19.89■□□□□ 0.77
SPAST-202ENST00000345662 ZBTB43O43298 467 aa19.89■□□□□ 0.77
SPAST-202ENST00000345662 DNAJC21Q5F1R6 531 aaKnown RBP19.89■□□□□ 0.77
SPAST-202ENST00000345662 HOOK3Q86VS8 718 aa19.89■□□□□ 0.77
SPAST-202ENST00000345662 SCLT1Q96NL6 688 aa19.89■□□□□ 0.77
SPAST-202ENST00000345662 TUBB2AQ13885 445 aa19.88■□□□□ 0.77
SPAST-202ENST00000345662 TUBB2BQ9BVA1 445 aa19.88■□□□□ 0.77
SPAST-202ENST00000345662 SELENOOQ9BVL4 669 aa19.88■□□□□ 0.77
SPAST-202ENST00000345662 MKNK2Q9HBH9 465 aa19.88■□□□□ 0.77
SPAST-202ENST00000345662 B4GALNT4Q76KP1 1039 aa19.88■□□□□ 0.77
SPAST-202ENST00000345662 CNGA4Q8IV77 575 aa19.88■□□□□ 0.77
SPAST-202ENST00000345662 SNRKQ9NRH2 765 aa19.88■□□□□ 0.77
SPAST-202ENST00000345662 EXOC1Q9NV70 894 aa19.88■□□□□ 0.77
SPAST-202ENST00000345662 NOS1P29475 1434 aa19.88■□□□□ 0.77
SPAST-202ENST00000345662 GADD45BO75293 160 aaPredicted RBP19.88■□□□□ 0.77
SPAST-202ENST00000345662 CCDC6Q16204 474 aa19.88■□□□□ 0.77
SPAST-202ENST00000345662 IMPACTQ9P2X3 320 aa19.88■□□□□ 0.77
SPAST-202ENST00000345662 MPRIPQ6WCQ1 1025 aa19.87■□□□□ 0.77
SPAST-202ENST00000345662 MFSD6Q6ZSS7 791 aa19.87■□□□□ 0.77
SPAST-202ENST00000345662 BRAPQ7Z569 592 aa19.87■□□□□ 0.77
SPAST-202ENST00000345662 RSRC1Q96IZ7 334 aaKnown RBP19.87■□□□□ 0.77
SPAST-202ENST00000345662 PTPDC1A2A3K4 754 aa19.87■□□□□ 0.77
SPAST-202ENST00000345662 USHBP1Q8N6Y0 703 aa19.87■□□□□ 0.77
SPAST-202ENST00000345662 MACROD2A1Z1Q3 448 aa19.87■□□□□ 0.77
SPAST-202ENST00000345662 WASLO00401 505 aaPredicted RBP19.87■□□□□ 0.77
SPAST-202ENST00000345662 PSMA7O14818 248 aa19.87■□□□□ 0.77
SPAST-202ENST00000345662 CPLX4Q7Z7G2 160 aa19.87■□□□□ 0.77
SPAST-202ENST00000345662 KIF14Q15058 1648 aa19.87■□□□□ 0.77
SPAST-202ENST00000345662 DESP17661 470 aa19.87■□□□□ 0.77
SPAST-202ENST00000345662 CHMP4BP1P59074 171 aa19.87■□□□□ 0.77
SPAST-202ENST00000345662 TCERG1LQ5VWI1 586 aa19.87■□□□□ 0.77
SPAST-202ENST00000345662 TOM1L2Q6ZVM7 507 aa19.87■□□□□ 0.77
SPAST-202ENST00000345662 TSPYL6Q8N831 410 aa19.86■□□□□ 0.77
SPAST-202ENST00000345662 A0A1B0GUA9 196 aa19.86■□□□□ 0.77
SPAST-202ENST00000345662 AKR1B15C9JRZ8 316 aaPredicted RBP19.86■□□□□ 0.77
SPAST-202ENST00000345662 KIF4AO95239 1232 aa19.86■□□□□ 0.77
SPAST-202ENST00000345662 GAS2L3Q86XJ1 694 aa19.86■□□□□ 0.77
SPAST-202ENST00000345662 POTEDQ86YR6 584 aa19.86■□□□□ 0.77
SPAST-202ENST00000345662 CCDC42Q96M95 316 aa19.86■□□□□ 0.77
SPAST-202ENST00000345662 INSRP06213 1382 aa19.86■□□□□ 0.77
SPAST-202ENST00000345662 NUTM2AQ8IVF1 878 aaPredicted RBP19.86■□□□□ 0.77
SPAST-202ENST00000345662 STMN4Q9H169 189 aaPredicted RBP19.86■□□□□ 0.77
SPAST-202ENST00000345662 ZFYP08048 801 aaPredicted RBP19.85■□□□□ 0.77
SPAST-202ENST00000345662 OAS2P29728 719 aaKnown RBP19.85■□□□□ 0.77
SPAST-202ENST00000345662 DMTNQ08495 405 aa19.85■□□□□ 0.77
SPAST-202ENST00000345662 WDHD1O75717 1129 aaPredicted RBP19.85■□□□□ 0.77
SPAST-202ENST00000345662 CFAP58Q5T655 872 aa19.85■□□□□ 0.77
SPAST-202ENST00000345662 KIF5BP33176 963 aa19.85■□□□□ 0.77
SPAST-202ENST00000345662 ZMYM3Q14202 1370 aa19.85■□□□□ 0.77
SPAST-202ENST00000345662 RAD50Q92878 1312 aa19.85■□□□□ 0.77
SPAST-202ENST00000345662 LRRC27Q9C0I9 530 aa19.85■□□□□ 0.77
SPAST-202ENST00000345662 SLC5A1P13866 664 aa19.84■□□□□ 0.77
SPAST-202ENST00000345662 STRN4Q9NRL3 753 aa19.84■□□□□ 0.77
SPAST-202ENST00000345662 A0A1B0GVL5 298 aa19.84■□□□□ 0.77
SPAST-202ENST00000345662 BRD1O95696 1058 aa19.84■□□□□ 0.77
SPAST-202ENST00000345662 INPP5BP32019 993 aa19.84■□□□□ 0.77
SPAST-202ENST00000345662 STAT6P42226 847 aa19.84■□□□□ 0.77
SPAST-202ENST00000345662 UBE3BQ7Z3V4 1068 aa19.84■□□□□ 0.77
SPAST-202ENST00000345662 DHX58Q96C10 678 aa19.84■□□□□ 0.77
SPAST-202ENST00000345662 CETN1Q12798 172 aa19.84■□□□□ 0.77
SPAST-202ENST00000345662 SPAG5Q96R06 1193 aa19.84■□□□□ 0.77
SPAST-202ENST00000345662 A6NNZ2 444 aa19.83■□□□□ 0.77
SPAST-202ENST00000345662 TUBB8Q3ZCM7 444 aa19.83■□□□□ 0.77
SPAST-202ENST00000345662 WWC2Q6AWC2 1192 aa19.83■□□□□ 0.77
SPAST-202ENST00000345662 NBPF7P0C2Y1 421 aaPredicted RBP19.83■□□□□ 0.77
SPAST-202ENST00000345662 CAVIN4Q5BKX8 364 aa19.83■□□□□ 0.77
SPAST-202ENST00000345662 NDUFAB1O14561 156 aa19.83■□□□□ 0.76
SPAST-202ENST00000345662 STARD3NLO95772 234 aa19.83■□□□□ 0.76
SPAST-202ENST00000345662 WTAPQ15007 396 aa19.83■□□□□ 0.76
SPAST-202ENST00000345662 NAPGQ99747 312 aaPredicted RBP19.83■□□□□ 0.76
SPAST-202ENST00000345662 MKRN1Q9UHC7 482 aaKnown RBP19.83■□□□□ 0.76
SPAST-202ENST00000345662 SOS1Q07889 1333 aaPredicted RBP19.83■□□□□ 0.76
SPAST-202ENST00000345662 NAA25Q14CX7 972 aa19.83■□□□□ 0.76
SPAST-202ENST00000345662 UTP14CQ5TAP6 766 aaKnown RBP19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms