RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 PCCAP05165 728 aaPredicted RBP15.92■□□□□ 0.14
SGCA-202ENST00000344627 MMP14P50281 582 aa15.92■□□□□ 0.14
SGCA-202ENST00000344627 NOGQ13253 232 aa15.92■□□□□ 0.14
SGCA-202ENST00000344627 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
SGCA-202ENST00000344627 CYP4F22Q6NT55 531 aa15.92■□□□□ 0.14
SGCA-202ENST00000344627 MICALL2Q8IY33 904 aa15.92■□□□□ 0.14
SGCA-202ENST00000344627 CELF1Q92879 486 aaKnown RBP15.92■□□□□ 0.14
SGCA-202ENST00000344627 METTL22Q9BUU2 404 aaPredicted RBP15.92■□□□□ 0.14
SGCA-202ENST00000344627 IL16Q14005 1332 aa15.92■□□□□ 0.14
SGCA-202ENST00000344627 LRRC37AA6NMS7 1700 aa15.91■□□□□ 0.14
SGCA-202ENST00000344627 PI4KAP2A4QPH2 592 aa15.91■□□□□ 0.14
SGCA-202ENST00000344627 G3V3G9 751 aa15.91■□□□□ 0.14
SGCA-202ENST00000344627 SLC4A2P04920 1241 aa15.91■□□□□ 0.14
SGCA-202ENST00000344627 NEXNQ0ZGT2 675 aa15.91■□□□□ 0.14
SGCA-202ENST00000344627 DCAF8Q5TAQ9 597 aa15.91■□□□□ 0.14
SGCA-202ENST00000344627 PI4KAP1Q8N8J0 262 aa15.91■□□□□ 0.14
SGCA-202ENST00000344627 TBC1D16Q8TBP0 767 aa15.91■□□□□ 0.14
SGCA-202ENST00000344627 CCDC85AQ96PX6 553 aaPredicted RBP15.91■□□□□ 0.14
SGCA-202ENST00000344627 ZNF609O15014 1411 aa15.91■□□□□ 0.14
SGCA-202ENST00000344627 RIMBP2O15034 1052 aa15.9■□□□□ 0.14
SGCA-202ENST00000344627 HIRAP54198 1017 aaPredicted RBP15.9■□□□□ 0.14
SGCA-202ENST00000344627 KSR2Q6VAB6 950 aa15.9■□□□□ 0.14
SGCA-202ENST00000344627 REM2Q8IYK8 340 aaPredicted RBP15.9■□□□□ 0.14
SGCA-202ENST00000344627 DCPSQ96C86 337 aaKnown RBP15.9■□□□□ 0.14
SGCA-202ENST00000344627 GLIS2Q9BZE0 524 aaPredicted RBP15.9■□□□□ 0.14
SGCA-202ENST00000344627 POLLQ9UGP5 575 aa15.9■□□□□ 0.14
SGCA-202ENST00000344627 DUOX1Q9NRD9 1551 aa15.89■□□□□ 0.13
SGCA-202ENST00000344627 PSMD14O00487 310 aa15.89■□□□□ 0.13
SGCA-202ENST00000344627 ECE2O60344 883 aa15.89■□□□□ 0.13
SGCA-202ENST00000344627 VIL1P09327 827 aaKnown RBP15.89■□□□□ 0.13
SGCA-202ENST00000344627 GPSM2P81274 684 aa15.89■□□□□ 0.13
SGCA-202ENST00000344627 G2E3Q7L622 706 aa15.89■□□□□ 0.13
SGCA-202ENST00000344627 AGBL3Q8NEM8 1001 aa15.89■□□□□ 0.13
SGCA-202ENST00000344627 CCDC102AQ96A19 550 aa15.89■□□□□ 0.13
SGCA-202ENST00000344627 CDC5LQ99459 802 aaKnown RBP15.89■□□□□ 0.13
SGCA-202ENST00000344627 SEC31BQ9NQW1 1179 aa15.89■□□□□ 0.13
SGCA-202ENST00000344627 GGA1Q9UJY5 639 aa15.89■□□□□ 0.13
SGCA-202ENST00000344627 TRPM7Q96QT4 1865 aa15.88■□□□□ 0.13
SGCA-202ENST00000344627 PODNQ7Z5L7 613 aa15.88■□□□□ 0.13
SGCA-202ENST00000344627 WDR63Q8IWG1 891 aa15.88■□□□□ 0.13
SGCA-202ENST00000344627 C2orf69Q8N8R5 385 aa15.88■□□□□ 0.13
SGCA-202ENST00000344627 TRPM4Q8TD43 1214 aa15.88■□□□□ 0.13
SGCA-202ENST00000344627 DBNDD1Q9H9R9 158 aa15.88■□□□□ 0.13
SGCA-202ENST00000344627 ANKIB1Q9P2G1 1089 aa15.88■□□□□ 0.13
SGCA-202ENST00000344627 FANCIQ9NVI1 1328 aa15.88■□□□□ 0.13
SGCA-202ENST00000344627 ATP2B4P23634 1241 aa15.87■□□□□ 0.13
SGCA-202ENST00000344627 KRT26Q7Z3Y9 468 aa15.87■□□□□ 0.13
SGCA-202ENST00000344627 ANKRD18AQ8IVF6 992 aa15.87■□□□□ 0.13
SGCA-202ENST00000344627 ABHD8Q96I13 439 aa15.87■□□□□ 0.13
SGCA-202ENST00000344627 XDHP47989 1333 aa15.87■□□□□ 0.13
SGCA-202ENST00000344627 IGKV5-2P06315 115 aa15.86■□□□□ 0.13
SGCA-202ENST00000344627 HUNKP57058 714 aa15.86■□□□□ 0.13
SGCA-202ENST00000344627 FKBP1BP68106 108 aa15.86■□□□□ 0.13
SGCA-202ENST00000344627 EXOSC9Q06265 439 aaKnown RBP15.86■□□□□ 0.13
SGCA-202ENST00000344627 FMR1Q06787 632 aaKnown RBP eCLIP15.86■□□□□ 0.13
SGCA-202ENST00000344627 GRM1Q13255 1194 aa15.86■□□□□ 0.13
SGCA-202ENST00000344627 FKBP5Q13451 457 aaPredicted RBP15.86■□□□□ 0.13
SGCA-202ENST00000344627 CWF19L2Q2TBE0 894 aaKnown RBP15.86■□□□□ 0.13
SGCA-202ENST00000344627 USP48Q86UV5 1035 aa15.86■□□□□ 0.13
SGCA-202ENST00000344627 SULF1Q8IWU6 871 aa15.86■□□□□ 0.13
SGCA-202ENST00000344627 ZNF408Q9H9D4 720 aa15.86■□□□□ 0.13
SGCA-202ENST00000344627 SAGE1Q9NXZ1 904 aa15.86■□□□□ 0.13
SGCA-202ENST00000344627 ZBTB12Q9Y330 459 aaPredicted RBP15.86■□□□□ 0.13
SGCA-202ENST00000344627 CACNA1FO60840 1977 aa15.86■□□□□ 0.13
SGCA-202ENST00000344627 UFL1O94874 794 aa15.85■□□□□ 0.13
SGCA-202ENST00000344627 FLIIQ13045 1269 aa15.85■□□□□ 0.13
SGCA-202ENST00000344627 DOK7Q18PE1 504 aa15.85■□□□□ 0.13
SGCA-202ENST00000344627 KIF4BQ2VIQ3 1234 aa15.85■□□□□ 0.13
SGCA-202ENST00000344627 RGMBQ6NW40 437 aa15.85■□□□□ 0.13
SGCA-202ENST00000344627 SAMD7Q7Z3H4 446 aa15.85■□□□□ 0.13
SGCA-202ENST00000344627 GBA2Q9HCG7 927 aaPredicted RBP15.85■□□□□ 0.13
SGCA-202ENST00000344627 PITPNM2Q9BZ72 1349 aa15.85■□□□□ 0.13
SGCA-202ENST00000344627 RTL9Q8NET4 1388 aa15.85■□□□□ 0.13
SGCA-202ENST00000344627 NEURL1BA8MQ27 555 aa15.84■□□□□ 0.13
SGCA-202ENST00000344627 CTSWP56202 376 aa15.84■□□□□ 0.13
SGCA-202ENST00000344627 ZNF280AP59817 542 aaPredicted RBP15.84■□□□□ 0.13
SGCA-202ENST00000344627 TBC1D10BQ4KMP7 808 aaPredicted RBP15.84■□□□□ 0.13
SGCA-202ENST00000344627 RSBN1LQ6PCB5 846 aaPredicted RBP15.84■□□□□ 0.13
SGCA-202ENST00000344627 BSDC1Q9NW68 430 aaPredicted RBP15.84■□□□□ 0.13
SGCA-202ENST00000344627 COL4A1P02462 1669 aa15.83■□□□□ 0.13
SGCA-202ENST00000344627 AOC2O75106 756 aa15.83■□□□□ 0.12
SGCA-202ENST00000344627 VAMP4O75379 141 aa15.83■□□□□ 0.12
SGCA-202ENST00000344627 UBE3BQ7Z3V4 1068 aa15.83■□□□□ 0.12
SGCA-202ENST00000344627 MYH16Q9H6N6 1097 aa15.83■□□□□ 0.12
SGCA-202ENST00000344627 MYO3BQ8WXR4 1341 aa15.83■□□□□ 0.12
SGCA-202ENST00000344627 MYH3P11055 1940 aa15.82■□□□□ 0.12
SGCA-202ENST00000344627 USP17L3A6NCW0 530 aa15.82■□□□□ 0.12
SGCA-202ENST00000344627 USP17L4A6NCW7 530 aa15.82■□□□□ 0.12
SGCA-202ENST00000344627 USP17L1Q7RTZ2 530 aa15.82■□□□□ 0.12
SGCA-202ENST00000344627 DNAAF4Q8WXU2 420 aa15.82■□□□□ 0.12
SGCA-202ENST00000344627 USP17L8P0C7I0 530 aa15.81■□□□□ 0.12
SGCA-202ENST00000344627 RGS19P49795 217 aa15.81■□□□□ 0.12
SGCA-202ENST00000344627 GREM2Q9H772 168 aa15.81■□□□□ 0.12
SGCA-202ENST00000344627 SPINK5Q9NQ38 1064 aaPredicted RBP15.81■□□□□ 0.12
SGCA-202ENST00000344627 MED23Q9ULK4 1368 aa15.81■□□□□ 0.12
SGCA-202ENST00000344627 LEMD3Q9Y2U8 911 aa15.81■□□□□ 0.12
SGCA-202ENST00000344627 SPEF2Q9C093 1822 aa15.8■□□□□ 0.12
SGCA-202ENST00000344627 ZNF157P51786 506 aaPredicted RBP15.8■□□□□ 0.12
SGCA-202ENST00000344627 GCKRQ14397 625 aa15.8■□□□□ 0.12
SGCA-202ENST00000344627 RBM26Q5T8P6 1007 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms