RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 PRPF40BQ6NWY9 871 aaKnown RBP9.96□□□□□ -0.81
HMGCR-202ENST00000343975 RHPN1Q8TCX5 695 aa9.96□□□□□ -0.81
HMGCR-202ENST00000343975 LEMD3Q9Y2U8 911 aa9.96□□□□□ -0.81
HMGCR-202ENST00000343975 ZNF831Q5JPB2 1677 aa9.96□□□□□ -0.81
HMGCR-202ENST00000343975 GRIN3BO60391 1043 aa9.96□□□□□ -0.81
HMGCR-202ENST00000343975 CIAO1O76071 339 aa9.96□□□□□ -0.81
HMGCR-202ENST00000343975 CSF1RP07333 972 aa9.96□□□□□ -0.81
HMGCR-202ENST00000343975 PCDHB15Q9Y5E8 787 aa9.96□□□□□ -0.81
HMGCR-202ENST00000343975 RGPD3A6NKT7 1758 aaPredicted RBP9.96□□□□□ -0.82
HMGCR-202ENST00000343975 RGPD4Q7Z3J3 1758 aa9.96□□□□□ -0.82
HMGCR-202ENST00000343975 PNMA6EA0A0J9YXQ4 647 aa9.96□□□□□ -0.82
HMGCR-202ENST00000343975 TRIM6-TRIM34B2RNG4 842 aa9.96□□□□□ -0.82
HMGCR-202ENST00000343975 FOXO4P98177 505 aa9.96□□□□□ -0.82
HMGCR-202ENST00000343975 LARGE2Q8N3Y3 721 aa9.96□□□□□ -0.82
HMGCR-202ENST00000343975 HELBQ8NG08 1087 aaPredicted RBP9.96□□□□□ -0.82
HMGCR-202ENST00000343975 FHDC1Q9C0D6 1143 aaPredicted RBP9.96□□□□□ -0.82
HMGCR-202ENST00000343975 ABCC12Q96J65 1359 aa9.96□□□□□ -0.82
HMGCR-202ENST00000343975 UQCRFS1P1P0C7P4 283 aa9.95□□□□□ -0.82
HMGCR-202ENST00000343975 EPHA10Q5JZY3 1008 aa9.95□□□□□ -0.82
HMGCR-202ENST00000343975 SP8Q8IXZ3 490 aa9.95□□□□□ -0.82
HMGCR-202ENST00000343975 C21orf2O43822 256 aa9.95□□□□□ -0.82
HMGCR-202ENST00000343975 DCTPP1Q9H773 170 aa9.95□□□□□ -0.82
HMGCR-202ENST00000343975 PPIP5K2O43314 1243 aa9.95□□□□□ -0.82
HMGCR-202ENST00000343975 HOXA10P31260 410 aaPredicted RBP9.95□□□□□ -0.82
HMGCR-202ENST00000343975 CHRNDQ07001 517 aa9.95□□□□□ -0.82
HMGCR-202ENST00000343975 WASHC4Q2M389 1173 aa9.95□□□□□ -0.82
HMGCR-202ENST00000343975 KLHDC4Q8TBB5 520 aa9.95□□□□□ -0.82
HMGCR-202ENST00000343975 LPIN2Q92539 896 aa9.95□□□□□ -0.82
HMGCR-202ENST00000343975 CELF1Q92879 486 aaKnown RBP9.95□□□□□ -0.82
HMGCR-202ENST00000343975 TAOK3Q9H2K8 898 aa9.95□□□□□ -0.82
HMGCR-202ENST00000343975 MYH14Q7Z406 1995 aaKnown RBP9.94□□□□□ -0.82
HMGCR-202ENST00000343975 UBE4AQ14139 1066 aa9.94□□□□□ -0.82
HMGCR-202ENST00000343975 NIM1KQ8IY84 436 aa9.94□□□□□ -0.82
HMGCR-202ENST00000343975 ATP6V0A2Q9Y487 856 aa9.94□□□□□ -0.82
HMGCR-202ENST00000343975 TFCP2Q12800 502 aa9.94□□□□□ -0.82
HMGCR-202ENST00000343975 CHAF1AQ13111 956 aaPredicted RBP9.94□□□□□ -0.82
HMGCR-202ENST00000343975 CHD1LQ86WJ1 897 aa9.94□□□□□ -0.82
HMGCR-202ENST00000343975 RTL9Q8NET4 1388 aa9.93□□□□□ -0.82
HMGCR-202ENST00000343975 RIMBP2O15034 1052 aa9.93□□□□□ -0.82
HMGCR-202ENST00000343975 PDE8BO95263 885 aa9.93□□□□□ -0.82
HMGCR-202ENST00000343975 CASP7P55210 303 aa9.93□□□□□ -0.82
HMGCR-202ENST00000343975 EIF6P56537 245 aaKnown RBP9.93□□□□□ -0.82
HMGCR-202ENST00000343975 PTPN12Q05209 780 aaKnown RBP9.93□□□□□ -0.82
HMGCR-202ENST00000343975 CCDC8Q9H0W5 538 aaPredicted RBP9.93□□□□□ -0.82
HMGCR-202ENST00000343975 ZNF804BA4D1E1 1349 aa9.93□□□□□ -0.82
HMGCR-202ENST00000343975 TAF5LO75529 589 aa9.93□□□□□ -0.82
HMGCR-202ENST00000343975 HIBADHP31937 336 aaKnown RBP9.93□□□□□ -0.82
HMGCR-202ENST00000343975 ZGPATQ8N5A5 531 aaKnown RBP9.93□□□□□ -0.82
HMGCR-202ENST00000343975 UPF2Q9HAU5 1272 aaKnown RBP9.93□□□□□ -0.82
HMGCR-202ENST00000343975 GLRX3O76003 335 aaKnown RBP9.92□□□□□ -0.82
HMGCR-202ENST00000343975 CRY2Q49AN0 593 aa9.92□□□□□ -0.82
HMGCR-202ENST00000343975 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.92□□□□□ -0.824e-7■□□□□ 10.8
HMGCR-202ENST00000343975 MINPP1Q9UNW1 487 aa9.92□□□□□ -0.82
HMGCR-202ENST00000343975 NOP58Q9Y2X3 529 aaKnown RBP9.92□□□□□ -0.82
HMGCR-202ENST00000343975 A0A1B0GUL7 405 aa9.92□□□□□ -0.82
HMGCR-202ENST00000343975 POLA2Q14181 598 aa9.92□□□□□ -0.82
HMGCR-202ENST00000343975 LRRC24Q50LG9 513 aa9.92□□□□□ -0.82
HMGCR-202ENST00000343975 DNAJC2Q99543 621 aaKnown RBP9.92□□□□□ -0.82
HMGCR-202ENST00000343975 SYT17Q9BSW7 474 aa9.92□□□□□ -0.82
HMGCR-202ENST00000343975 COL5A3P25940 1745 aaPredicted RBP9.92□□□□□ -0.82
HMGCR-202ENST00000343975 FKBP4Q02790 459 aaKnown RBP eCLIP9.92□□□□□ -0.82
HMGCR-202ENST00000343975 SPTY2D1Q68D10 685 aaPredicted RBP9.92□□□□□ -0.82
HMGCR-202ENST00000343975 ZSCAN25Q6NSZ9 544 aa9.92□□□□□ -0.82
HMGCR-202ENST00000343975 SLF2Q8IX21 1173 aa9.92□□□□□ -0.82
HMGCR-202ENST00000343975 RILPL2Q969X0 211 aa9.92□□□□□ -0.82
HMGCR-202ENST00000343975 DDRGK1Q96HY6 314 aa9.92□□□□□ -0.82
HMGCR-202ENST00000343975 GPR108Q9NPR9 543 aa9.92□□□□□ -0.82
HMGCR-202ENST00000343975 ECHDC1Q9NTX5 307 aa9.92□□□□□ -0.82
HMGCR-202ENST00000343975 MX1P20591 662 aa9.91□□□□□ -0.82
HMGCR-202ENST00000343975 TNNI3KQ59H18 835 aa9.91□□□□□ -0.82
HMGCR-202ENST00000343975 PUS3Q9BZE2 481 aaKnown RBP9.91□□□□□ -0.82
HMGCR-202ENST00000343975 FPGT-TNNI3KV9GXZ4 949 aa9.91□□□□□ -0.82
HMGCR-202ENST00000343975 CNTROBQ8N137 903 aa9.91□□□□□ -0.82
HMGCR-202ENST00000343975 CICQ96RK0 1608 aaPredicted RBP9.91□□□□□ -0.82
HMGCR-202ENST00000343975 LRP2BPQ9P2M1 347 aa9.91□□□□□ -0.82
HMGCR-202ENST00000343975 ABCF2Q9UG63 623 aa9.91□□□□□ -0.82
HMGCR-202ENST00000343975 TAF1LQ8IZX4 1826 aa9.91□□□□□ -0.82
HMGCR-202ENST00000343975 RIC1Q4ADV7 1423 aa9.91□□□□□ -0.82
HMGCR-202ENST00000343975 SMARCA5O60264 1052 aaPredicted RBP9.91□□□□□ -0.82
HMGCR-202ENST00000343975 SMC5Q8IY18 1101 aa9.91□□□□□ -0.82
HMGCR-202ENST00000343975 DENND2AQ9ULE3 1009 aa9.91□□□□□ -0.82
HMGCR-202ENST00000343975 TTF1Q15361 905 aaPredicted RBP9.9□□□□□ -0.82
HMGCR-202ENST00000343975 DPY19L2Q6NUT2 758 aa9.9□□□□□ -0.82
HMGCR-202ENST00000343975 OGFOD1Q8N543 542 aa9.9□□□□□ -0.82
HMGCR-202ENST00000343975 DIAPH3Q9NSV4 1193 aa9.9□□□□□ -0.82
HMGCR-202ENST00000343975 HDAC9Q9UKV0 1011 aa9.9□□□□□ -0.82
HMGCR-202ENST00000343975 KIAA1211Q6ZU35 1233 aa9.9□□□□□ -0.82
HMGCR-202ENST00000343975 RUFY2Q8WXA3 655 aa9.9□□□□□ -0.82
HMGCR-202ENST00000343975 RAI14Q9P0K7 980 aa9.9□□□□□ -0.82
HMGCR-202ENST00000343975 TIMM10P62072 90 aa9.89□□□□□ -0.83
HMGCR-202ENST00000343975 DZIP1Q86YF9 867 aaKnown RBP9.89□□□□□ -0.83
HMGCR-202ENST00000343975 KAZALD1Q96I82 304 aa9.89□□□□□ -0.83
HMGCR-202ENST00000343975 FSD1Q9BTV5 496 aa9.89□□□□□ -0.83
HMGCR-202ENST00000343975 UBR3Q6ZT12 1888 aa9.89□□□□□ -0.83
HMGCR-202ENST00000343975 HIP1O00291 1037 aa9.89□□□□□ -0.83
HMGCR-202ENST00000343975 LDHCP07864 332 aa9.89□□□□□ -0.83
HMGCR-202ENST00000343975 MAP3K12Q12852 859 aa9.89□□□□□ -0.83
HMGCR-202ENST00000343975 C3orf67Q6ZVT6 689 aa9.89□□□□□ -0.83
HMGCR-202ENST00000343975 TBC1D22AQ8WUA7 517 aa9.89□□□□□ -0.83
HMGCR-202ENST00000343975 XAGE2Q96GT9 111 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms