RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 COL11A2P13942 1736 aaPredicted RBP17.07■□□□□ 0.32
PMS1-201ENST00000342075 CIAO1O76071 339 aa17.07■□□□□ 0.32
PMS1-201ENST00000342075 HMGB2P26583 209 aaKnown RBP17.07■□□□□ 0.32
PMS1-201ENST00000342075 TTC22Q5TAA0 569 aa17.07■□□□□ 0.32
PMS1-201ENST00000342075 VGLL2Q8N8G2 317 aa17.06■□□□□ 0.32
PMS1-201ENST00000342075 PI4K2BQ8TCG2 481 aa17.06■□□□□ 0.32
PMS1-201ENST00000342075 A0A1B0GUL7 405 aa17.06■□□□□ 0.32
PMS1-201ENST00000342075 ZNF609O15014 1411 aa17.05■□□□□ 0.32
PMS1-201ENST00000342075 IGHMBP2P38935 993 aaKnown RBP17.05■□□□□ 0.32
PMS1-201ENST00000342075 CACNA1SQ13698 1873 aa17.05■□□□□ 0.32
PMS1-201ENST00000342075 ANKRD18AQ8IVF6 992 aa17.05■□□□□ 0.32
PMS1-201ENST00000342075 PELP1Q8IZL8 1130 aaKnown RBP17.05■□□□□ 0.32
PMS1-201ENST00000342075 CEP126Q9P2H0 1117 aa17.05■□□□□ 0.32
PMS1-201ENST00000342075 RTL9Q8NET4 1388 aa17.05■□□□□ 0.32
PMS1-201ENST00000342075 SEC24BO95487 1268 aa17.05■□□□□ 0.32
PMS1-201ENST00000342075 OLFM4Q6UX06 510 aa17.05■□□□□ 0.32
PMS1-201ENST00000342075 CHRNDQ07001 517 aa17.05■□□□□ 0.32
PMS1-201ENST00000342075 EDC3Q96F86 508 aaKnown RBP17.05■□□□□ 0.32
PMS1-201ENST00000342075 TSHZ2Q9NRE2 1034 aa17.05■□□□□ 0.32
PMS1-201ENST00000342075 WWC3Q9ULE0 1092 aa17.05■□□□□ 0.32
PMS1-201ENST00000342075 A0A1B0GUL6 1792 aa17.04■□□□□ 0.32
PMS1-201ENST00000342075 DDX46Q7L014 1031 aaKnown RBP17.04■□□□□ 0.32
PMS1-201ENST00000342075 HSP90B1P14625 803 aaKnown RBP17.04■□□□□ 0.32
PMS1-201ENST00000342075 SDSP20132 328 aa17.04■□□□□ 0.32
PMS1-201ENST00000342075 CRY2Q49AN0 593 aa17.04■□□□□ 0.32
PMS1-201ENST00000342075 RPGRQ92834 1020 aaKnown RBP17.04■□□□□ 0.32
PMS1-201ENST00000342075 CDC5LQ99459 802 aaKnown RBP17.04■□□□□ 0.32
PMS1-201ENST00000342075 CHRNA5P30532 468 aa17.03■□□□□ 0.32
PMS1-201ENST00000342075 RPS8P62241 208 aaKnown RBP17.03■□□□□ 0.32
PMS1-201ENST00000342075 BOLA2Q9H3K6 86 aa17.03■□□□□ 0.32
PMS1-201ENST00000342075 PDE8BO95263 885 aa17.02■□□□□ 0.32
PMS1-201ENST00000342075 STAP2Q9UGK3 403 aa17.02■□□□□ 0.32
PMS1-201ENST00000342075 MINPP1Q9UNW1 487 aa17.02■□□□□ 0.32
PMS1-201ENST00000342075 KLRK1P26718 216 aa17.02■□□□□ 0.32
PMS1-201ENST00000342075 BMP2KLQ5H9B9 411 aa17.02■□□□□ 0.32
PMS1-201ENST00000342075 OSBPL3Q9H4L5 887 aa17.02■□□□□ 0.32
PMS1-201ENST00000342075 ATP2B3Q16720 1220 aa17.02■□□□□ 0.31
PMS1-201ENST00000342075 PI16Q6UXB8 463 aa17.02■□□□□ 0.31
PMS1-201ENST00000342075 RILPL2Q969X0 211 aa17.02■□□□□ 0.31
PMS1-201ENST00000342075 XAGE2Q96GT9 111 aa17.02■□□□□ 0.31
PMS1-201ENST00000342075 GPR101Q96P66 508 aaPredicted RBP17.02■□□□□ 0.31
PMS1-201ENST00000342075 ECHDC1Q9NTX5 307 aa17.02■□□□□ 0.31
PMS1-201ENST00000342075 TRIM6-TRIM34B2RNG4 842 aa17.01■□□□□ 0.31
PMS1-201ENST00000342075 BRIP1Q9BX63 1249 aa17.01■□□□□ 0.31
PMS1-201ENST00000342075 BACH2Q9BYV9 841 aa17.01■□□□□ 0.31
PMS1-201ENST00000342075 BSDC1Q9NW68 430 aaPredicted RBP17.01■□□□□ 0.31
PMS1-201ENST00000342075 CHGBP05060 677 aa17■□□□□ 0.31
PMS1-201ENST00000342075 GRAPQ13588 217 aa17■□□□□ 0.31
PMS1-201ENST00000342075 GRAPLQ8TC17 118 aaPredicted RBP17■□□□□ 0.31
PMS1-201ENST00000342075 SRGNP10124 158 aa17■□□□□ 0.31
PMS1-201ENST00000342075 SCARF1Q14162 830 aa17■□□□□ 0.31
PMS1-201ENST00000342075 ZNF219Q9P2Y4 722 aaPredicted RBP16.99■□□□□ 0.31
PMS1-201ENST00000342075 MROH5Q6ZUA9 1318 aa16.99■□□□□ 0.31
PMS1-201ENST00000342075 KLRG2A4D1S0 409 aaPredicted RBP16.99■□□□□ 0.31
PMS1-201ENST00000342075 SNRKQ9NRH2 765 aa16.99■□□□□ 0.31
PMS1-201ENST00000342075 FBXO3Q9UK99 471 aa16.99■□□□□ 0.31
PMS1-201ENST00000342075 AK9Q5TCS8 1911 aa16.99■□□□□ 0.31
PMS1-201ENST00000342075 ZNF622Q969S3 477 aaKnown RBP eCLIP16.98■□□□□ 0.31
PMS1-201ENST00000342075 DNAJC2Q99543 621 aaKnown RBP16.98■□□□□ 0.31
PMS1-201ENST00000342075 IQSEC3Q9UPP2 1182 aaPredicted RBP16.98■□□□□ 0.31
PMS1-201ENST00000342075 FGFR2P21802 821 aa16.98■□□□□ 0.31
PMS1-201ENST00000342075 PHKA1P46020 1223 aa16.98■□□□□ 0.31
PMS1-201ENST00000342075 PUM3Q15397 648 aaKnown RBP16.98■□□□□ 0.31
PMS1-201ENST00000342075 TBC1D9Q6ZT07 1266 aa16.97■□□□□ 0.31
PMS1-201ENST00000342075 C2CD5Q86YS7 1000 aa16.97■□□□□ 0.31
PMS1-201ENST00000342075 PPP1R1BQ9UD71 204 aaPredicted RBP16.97■□□□□ 0.31
PMS1-201ENST00000342075 TTC41PQ6P2S7 1318 aa16.97■□□□□ 0.31
PMS1-201ENST00000342075 TXNRD3Q86VQ6 643 aa16.97■□□□□ 0.31
PMS1-201ENST00000342075 RBM17Q96I25 401 aaKnown RBP16.97■□□□□ 0.31
PMS1-201ENST00000342075 GPR108Q9NPR9 543 aa16.97■□□□□ 0.31
PMS1-201ENST00000342075 BCAMP50895 628 aa16.96■□□□□ 0.31
PMS1-201ENST00000342075 SLFNL1Q499Z3 407 aa16.96■□□□□ 0.31
PMS1-201ENST00000342075 KLHL34Q8N239 644 aa16.96■□□□□ 0.31
PMS1-201ENST00000342075 IL25Q9H293 177 aa16.96■□□□□ 0.31
PMS1-201ENST00000342075 SLX4Q8IY92 1834 aa16.96■□□□□ 0.31
PMS1-201ENST00000342075 GYG1P46976 350 aa16.96■□□□□ 0.31
PMS1-201ENST00000342075 GORABQ5T7V8 394 aa16.96■□□□□ 0.31
PMS1-201ENST00000342075 AKAP2Q9Y2D5 859 aa16.96■□□□□ 0.31
PMS1-201ENST00000342075 ANTXR1Q9H6X2 564 aa16.96■□□□□ 0.3
PMS1-201ENST00000342075 A0A0G2JLW4 131 aa16.95■□□□□ 0.3
PMS1-201ENST00000342075 GLRX3O76003 335 aaKnown RBP16.95■□□□□ 0.3
PMS1-201ENST00000342075 HOXA10P31260 410 aaPredicted RBP16.95■□□□□ 0.3
PMS1-201ENST00000342075 PDE6BP35913 854 aa16.95■□□□□ 0.3
PMS1-201ENST00000342075 GPSM2P81274 684 aa16.95■□□□□ 0.3
PMS1-201ENST00000342075 GPATCH3Q96I76 525 aa16.95■□□□□ 0.3
PMS1-201ENST00000342075 ANKIB1Q9P2G1 1089 aa16.95■□□□□ 0.3
PMS1-201ENST00000342075 MYO5AQ9Y4I1 1855 aaKnown RBP16.95■□□□□ 0.3
PMS1-201ENST00000342075 SLC16A10Q8TF71 515 aa16.95■□□□□ 0.3
PMS1-201ENST00000342075 MTFR1LQ9H019 292 aa16.95■□□□□ 0.3
PMS1-201ENST00000342075 ARAP2Q8WZ64 1704 aa16.94■□□□□ 0.3
PMS1-201ENST00000342075 CCDC102BQ68D86 513 aa16.94■□□□□ 0.3
PMS1-201ENST00000342075 LPIN2Q92539 896 aa16.94■□□□□ 0.3
PMS1-201ENST00000342075 AOX1Q06278 1338 aa16.94■□□□□ 0.3
PMS1-201ENST00000342075 C10orf71Q711Q0 1435 aa16.94■□□□□ 0.3
PMS1-201ENST00000342075 AKAP11Q9UKA4 1901 aa16.94■□□□□ 0.3
PMS1-201ENST00000342075 NSFL1CQ9UNZ2 370 aaKnown RBP16.94■□□□□ 0.3
PMS1-201ENST00000342075 PPEF1O14829 653 aaPredicted RBP16.94■□□□□ 0.3
PMS1-201ENST00000342075 ERC2O15083 957 aa16.94■□□□□ 0.3
PMS1-201ENST00000342075 NPR1P16066 1061 aa16.94■□□□□ 0.3
PMS1-201ENST00000342075 ATP5JP18859 108 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms