RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 KIF12Q96FN5 646 aa13.14□□□□□ -0.31
TPM3-207ENST00000341372 PHAXQ9H814 394 aaKnown RBP13.14□□□□□ -0.31
TPM3-207ENST00000341372 RBM47A0AV96 593 aaKnown RBP13.13□□□□□ -0.31
TPM3-207ENST00000341372 GPTP24298 496 aa13.13□□□□□ -0.31
TPM3-207ENST00000341372 SLFN5Q08AF3 891 aa13.13□□□□□ -0.31
TPM3-207ENST00000341372 SUSD4Q5VX71 490 aa13.13□□□□□ -0.31
TPM3-207ENST00000341372 C2CD5Q86YS7 1000 aa13.13□□□□□ -0.31
TPM3-207ENST00000341372 LAMB2P55268 1798 aa13.13□□□□□ -0.31
TPM3-207ENST00000341372 FOXK1P85037 733 aa13.13□□□□□ -0.31
TPM3-207ENST00000341372 CCDC24Q8N4L8 307 aa13.13□□□□□ -0.31
TPM3-207ENST00000341372 ISCA1Q9BUE6 129 aa13.13□□□□□ -0.31
TPM3-207ENST00000341372 STK31Q9BXU1 1019 aa13.13□□□□□ -0.31
TPM3-207ENST00000341372 KIAA1522Q9P206 1035 aaPredicted RBP13.13□□□□□ -0.31
TPM3-207ENST00000341372 H0YIN7 160 aa13.12□□□□□ -0.31
TPM3-207ENST00000341372 PPP1R42Q7Z4L9 355 aa13.12□□□□□ -0.31
TPM3-207ENST00000341372 NLRP10Q86W26 655 aa13.12□□□□□ -0.31
TPM3-207ENST00000341372 TRMT2AQ8IZ69 625 aaKnown RBP13.12□□□□□ -0.31
TPM3-207ENST00000341372 NPHP1O15259 732 aa13.12□□□□□ -0.31
TPM3-207ENST00000341372 SRGNP10124 158 aa13.12□□□□□ -0.31
TPM3-207ENST00000341372 TRIM28Q13263 835 aaKnown RBP13.12□□□□□ -0.31
TPM3-207ENST00000341372 DALRD3Q5D0E6 543 aaKnown RBP13.12□□□□□ -0.31
TPM3-207ENST00000341372 FAM217BQ9NTX9 383 aaPredicted RBP13.12□□□□□ -0.31
TPM3-207ENST00000341372 BCS1LQ9Y276 419 aa13.12□□□□□ -0.31
TPM3-207ENST00000341372 FARP1Q9Y4F1 1045 aaPredicted RBP13.12□□□□□ -0.31
TPM3-207ENST00000341372 CACNA1SQ13698 1873 aa13.11□□□□□ -0.31
TPM3-207ENST00000341372 DDX60Q8IY21 1712 aaKnown RBP13.11□□□□□ -0.31
TPM3-207ENST00000341372 CRY2Q49AN0 593 aa13.11□□□□□ -0.31
TPM3-207ENST00000341372 STYK1Q6J9G0 422 aa13.11□□□□□ -0.31
TPM3-207ENST00000341372 ADCY9O60503 1353 aa13.11□□□□□ -0.31
TPM3-207ENST00000341372 DDX58O95786 925 aaKnown RBP13.1□□□□□ -0.31
TPM3-207ENST00000341372 MAP3K9P80192 1104 aa13.1□□□□□ -0.31
TPM3-207ENST00000341372 ERFEQ4G0M1 354 aa13.1□□□□□ -0.31
TPM3-207ENST00000341372 TMEM259Q4ZIN3 620 aa13.1□□□□□ -0.31
TPM3-207ENST00000341372 NUTM1Q86Y26 1132 aa13.1□□□□□ -0.31
TPM3-207ENST00000341372 UTP14AQ9BVJ6 771 aaKnown RBP13.1□□□□□ -0.31
TPM3-207ENST00000341372 WWC3Q9ULE0 1092 aa13.1□□□□□ -0.31
TPM3-207ENST00000341372 SLX4Q8IY92 1834 aa13.1□□□□□ -0.31
TPM3-207ENST00000341372 FAM177BA6PVY3 158 aa13.1□□□□□ -0.31
TPM3-207ENST00000341372 SLC10A5Q5PT55 438 aa13.1□□□□□ -0.31
TPM3-207ENST00000341372 RIC3Q7Z5B4 369 aa13.1□□□□□ -0.31
TPM3-207ENST00000341372 TTLL6Q8N841 843 aa13.1□□□□□ -0.31
TPM3-207ENST00000341372 MASTLQ96GX5 879 aa13.1□□□□□ -0.31
TPM3-207ENST00000341372 TCERG1O14776 1098 aaKnown RBP13.09□□□□□ -0.31
TPM3-207ENST00000341372 KSR2Q6VAB6 950 aa13.09□□□□□ -0.31
TPM3-207ENST00000341372 G2E3Q7L622 706 aa13.09□□□□□ -0.31
TPM3-207ENST00000341372 CDCA7LQ96GN5 454 aa13.09□□□□□ -0.31
TPM3-207ENST00000341372 METTL22Q9BUU2 404 aaPredicted RBP13.09□□□□□ -0.31
TPM3-207ENST00000341372 FER1L6Q2WGJ9 1857 aa13.08□□□□□ -0.31
TPM3-207ENST00000341372 NPR1P16066 1061 aa13.08□□□□□ -0.31
TPM3-207ENST00000341372 GTF2E1P29083 439 aaPredicted RBP13.08□□□□□ -0.31
TPM3-207ENST00000341372 VRTNQ9H8Y1 702 aa13.08□□□□□ -0.31
TPM3-207ENST00000341372 PITPNM1O00562 1244 aa13.08□□□□□ -0.32
TPM3-207ENST00000341372 CNKSR1Q969H4 720 aa13.08□□□□□ -0.32
TPM3-207ENST00000341372 SBF1O95248 1867 aa13.08□□□□□ -0.32
TPM3-207ENST00000341372 SH3TC1Q8TE82 1336 aa13.07□□□□□ -0.32
TPM3-207ENST00000341372 PI4KAP2A4QPH2 592 aa13.07□□□□□ -0.32
TPM3-207ENST00000341372 PI4KAP1Q8N8J0 262 aa13.07□□□□□ -0.32
TPM3-207ENST00000341372 NLRP7Q8WX94 980 aa13.07□□□□□ -0.32
TPM3-207ENST00000341372 YTHDC1Q96MU7 727 aaKnown RBP13.07□□□□□ -0.32
TPM3-207ENST00000341372 MAP3K2Q9Y2U5 619 aa13.07□□□□□ -0.32
TPM3-207ENST00000341372 TMEM88BA6NKF7 163 aa13.06□□□□□ -0.32
TPM3-207ENST00000341372 ATP5J2-PTCD1G3V325 749 aa13.06□□□□□ -0.32
TPM3-207ENST00000341372 CT47B1P0C2W7 299 aaPredicted RBP13.06□□□□□ -0.32
TPM3-207ENST00000341372 YY1P25490 414 aa13.06□□□□□ -0.32
TPM3-207ENST00000341372 HOXA10P31260 410 aaPredicted RBP13.06□□□□□ -0.32
TPM3-207ENST00000341372 PPP2R2DQ66LE6 453 aa13.06□□□□□ -0.32
TPM3-207ENST00000341372 CCDC191Q8NCU4 936 aa13.06□□□□□ -0.32
TPM3-207ENST00000341372 ZNF622Q969S3 477 aaKnown RBP eCLIP13.06□□□□□ -0.322e-8■■□□□ 13.1
TPM3-207ENST00000341372 MYD88Q99836 296 aa13.06□□□□□ -0.32
TPM3-207ENST00000341372 TRMT112Q9UI30 125 aaKnown RBP13.06□□□□□ -0.32
TPM3-207ENST00000341372 PRPF40BQ6NWY9 871 aaKnown RBP13.06□□□□□ -0.32
TPM3-207ENST00000341372 PLPP6Q8IY26 295 aa13.06□□□□□ -0.32
TPM3-207ENST00000341372 LIMD1Q9UGP4 676 aa13.06□□□□□ -0.32
TPM3-207ENST00000341372 SNED1Q8TER0 1413 aa13.05□□□□□ -0.32
TPM3-207ENST00000341372 C3orf67Q6ZVT6 689 aa13.05□□□□□ -0.32
TPM3-207ENST00000341372 C7orf43Q8WVR3 580 aa13.05□□□□□ -0.32
TPM3-207ENST00000341372 IGKV5-2P06315 115 aa13.05□□□□□ -0.32
TPM3-207ENST00000341372 MRRFQ96E11 262 aaKnown RBP13.05□□□□□ -0.32
TPM3-207ENST00000341372 NLRP3Q96P20 1036 aa13.05□□□□□ -0.32
TPM3-207ENST00000341372 PCCAP05165 728 aaPredicted RBP13.04□□□□□ -0.32
TPM3-207ENST00000341372 HNRNPUQ00839 825 aaKnown RBP eCLIP13.04□□□□□ -0.32
TPM3-207ENST00000341372 FKBP5Q13451 457 aaPredicted RBP13.04□□□□□ -0.32
TPM3-207ENST00000341372 SYNE4Q8N205 404 aa13.04□□□□□ -0.32
TPM3-207ENST00000341372 ZBTB38Q8NAP3 1195 aaPredicted RBP13.04□□□□□ -0.32
TPM3-207ENST00000341372 DNAAF4Q8WXU2 420 aa13.04□□□□□ -0.32
TPM3-207ENST00000341372 CRAMP1Q96RY5 1269 aa13.04□□□□□ -0.32
TPM3-207ENST00000341372 TBC1D2Q9BYX2 928 aa13.04□□□□□ -0.32
TPM3-207ENST00000341372 CWC25Q9NXE8 425 aaPredicted RBP13.04□□□□□ -0.32
TPM3-207ENST00000341372 ZBED9Q6R2W3 1325 aa13.04□□□□□ -0.32
TPM3-207ENST00000341372 ALDH1B1P30837 517 aa13.03□□□□□ -0.32
TPM3-207ENST00000341372 ALDH1L2Q3SY69 923 aa13.03□□□□□ -0.32
TPM3-207ENST00000341372 ARHGAP27Q6ZUM4 889 aa13.03□□□□□ -0.32
TPM3-207ENST00000341372 MRPL50Q8N5N7 158 aaKnown RBP13.03□□□□□ -0.32
TPM3-207ENST00000341372 LTBP3Q9NS15 1303 aa13.03□□□□□ -0.32
TPM3-207ENST00000341372 MYH3P11055 1940 aa13.03□□□□□ -0.32
TPM3-207ENST00000341372 DICER1Q9UPY3 1922 aaKnown RBP13.03□□□□□ -0.32
TPM3-207ENST00000341372 NEURL1BA8MQ27 555 aa13.03□□□□□ -0.32
TPM3-207ENST00000341372 NFKBIEO00221 500 aa13.03□□□□□ -0.32
TPM3-207ENST00000341372 HCLS1P14317 486 aaPredicted RBP13.03□□□□□ -0.32
TPM3-207ENST00000341372 NEXNQ0ZGT2 675 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms