RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 THRAP3Q9Y2W1 955 aaKnown RBP8.89□□□□□ -0.99
HIPK1-201ENST00000340480 CCDC178Q5BJE1 867 aa8.89□□□□□ -0.99
HIPK1-201ENST00000340480 CCDC85AQ96PX6 553 aaPredicted RBP8.89□□□□□ -0.99
HIPK1-201ENST00000340480 CCDC87Q9NVE4 849 aa8.89□□□□□ -0.99
HIPK1-201ENST00000340480 OLFM4Q6UX06 510 aa8.89□□□□□ -0.99
HIPK1-201ENST00000340480 KRT23Q9C075 422 aa8.89□□□□□ -0.99
HIPK1-201ENST00000340480 CPDO75976 1380 aa8.89□□□□□ -0.99
HIPK1-201ENST00000340480 STK3Q13188 491 aa8.89□□□□□ -0.99
HIPK1-201ENST00000340480 MAP3K11Q16584 847 aa8.89□□□□□ -0.99
HIPK1-201ENST00000340480 CEP131Q9UPN4 1083 aa8.89□□□□□ -0.99
HIPK1-201ENST00000340480 USP16Q9Y5T5 823 aa8.89□□□□□ -0.99
HIPK1-201ENST00000340480 GJB2P29033 226 aa8.89□□□□□ -0.99
HIPK1-201ENST00000340480 DACH1Q9UI36 760 aa8.89□□□□□ -0.99
HIPK1-201ENST00000340480 RFX7Q2KHR2 1363 aa8.89□□□□□ -0.99
HIPK1-201ENST00000340480 RUFY3Q7L099 469 aa8.88□□□□□ -0.99
HIPK1-201ENST00000340480 NLRP3Q96P20 1036 aa8.88□□□□□ -0.99
HIPK1-201ENST00000340480 TXLNAP40222 546 aa8.88□□□□□ -0.99
HIPK1-201ENST00000340480 UVSSAQ2YD98 709 aa8.88□□□□□ -0.99
HIPK1-201ENST00000340480 IQCA1Q86XH1 822 aa8.88□□□□□ -0.99
HIPK1-201ENST00000340480 DNAJC10Q8IXB1 793 aa8.88□□□□□ -0.99
HIPK1-201ENST00000340480 ANKRD2Q9GZV1 360 aa8.88□□□□□ -0.99
HIPK1-201ENST00000340480 C8orf76Q96K31 380 aa8.88□□□□□ -0.99
HIPK1-201ENST00000340480 ME1P48163 572 aa8.88□□□□□ -0.99
HIPK1-201ENST00000340480 DHX32Q7L7V1 743 aaKnown RBP8.88□□□□□ -0.99
HIPK1-201ENST00000340480 FAM13BQ9NYF5 915 aa8.88□□□□□ -0.99
HIPK1-201ENST00000340480 IL6STP40189 918 aaPredicted RBP8.88□□□□□ -0.99
HIPK1-201ENST00000340480 CEP57L1Q8IYX8 460 aa8.88□□□□□ -0.99
HIPK1-201ENST00000340480 LLPHQ9BRT6 129 aaKnown RBP8.88□□□□□ -0.99
HIPK1-201ENST00000340480 MROH5Q6ZUA9 1318 aa8.88□□□□□ -0.99
HIPK1-201ENST00000340480 CDR1P51861 262 aa8.87□□□□□ -0.99
HIPK1-201ENST00000340480 RRP12Q5JTH9 1297 aaKnown RBP8.87□□□□□ -0.99
HIPK1-201ENST00000340480 NIP7Q9Y221 180 aaKnown RBP eCLIP8.87□□□□□ -0.99
HIPK1-201ENST00000340480 TPTE2Q6XPS3 522 aa8.87□□□□□ -0.99
HIPK1-201ENST00000340480 GSTO1P78417 241 aa8.87□□□□□ -0.99
HIPK1-201ENST00000340480 DSCC1Q9BVC3 393 aa8.87□□□□□ -0.99
HIPK1-201ENST00000340480 ABCF2Q9UG63 623 aa8.87□□□□□ -0.99
HIPK1-201ENST00000340480 A0A1B0GUL7 405 aa8.87□□□□□ -0.99
HIPK1-201ENST00000340480 PUM3Q15397 648 aaKnown RBP8.87□□□□□ -0.99
HIPK1-201ENST00000340480 AK2P54819 239 aa8.87□□□□□ -0.99
HIPK1-201ENST00000340480 GIGYF2Q6Y7W6 1299 aaKnown RBP8.87□□□□□ -0.99
HIPK1-201ENST00000340480 NBPF5PQ86XG9 351 aaPredicted RBP8.87□□□□□ -0.99
HIPK1-201ENST00000340480 CERS3Q8IU89 383 aa8.87□□□□□ -0.99
HIPK1-201ENST00000340480 APPBP2Q92624 585 aa8.87□□□□□ -0.99
HIPK1-201ENST00000340480 MAP3K15Q6ZN16 1313 aa8.87□□□□□ -0.99
HIPK1-201ENST00000340480 GOLGA8BA8MQT2 603 aa8.87□□□□□ -0.99
HIPK1-201ENST00000340480 F13A1P00488 732 aa8.87□□□□□ -0.99
HIPK1-201ENST00000340480 A1BGP04217 495 aa8.87□□□□□ -0.99
HIPK1-201ENST00000340480 SETDB2Q96T68 719 aa8.87□□□□□ -0.99
HIPK1-201ENST00000340480 RGS12O14924 1447 aa8.86□□□□□ -0.99
HIPK1-201ENST00000340480 ZBTB38Q8NAP3 1195 aaPredicted RBP8.86□□□□□ -0.99
HIPK1-201ENST00000340480 DBNDD2Q9BQY9 259 aa8.86□□□□□ -0.99
HIPK1-201ENST00000340480 RBM27Q9P2N5 1060 aaKnown RBP8.86□□□□□ -0.99
HIPK1-201ENST00000340480 ERVV-1B6SEH8 477 aa8.86□□□□□ -0.99
HIPK1-201ENST00000340480 BRF1Q92994 677 aa8.86□□□□□ -0.99
HIPK1-201ENST00000340480 CYP27B1O15528 508 aa8.86□□□□□ -0.99
HIPK1-201ENST00000340480 SETQ01105 290 aaPredicted RBP8.86□□□□□ -0.99
HIPK1-201ENST00000340480 GPS2Q13227 327 aa8.86□□□□□ -0.99
HIPK1-201ENST00000340480 SNX14Q9Y5W7 946 aa8.86□□□□□ -0.99
HIPK1-201ENST00000340480 SLC12A7Q9Y666 1083 aa8.86□□□□□ -0.99
HIPK1-201ENST00000340480 BAG3O95817 575 aa8.86□□□□□ -0.99
HIPK1-201ENST00000340480 DDX17Q92841 729 aaKnown RBP8.86□□□□□ -0.99
HIPK1-201ENST00000340480 DNAI2Q9GZS0 605 aa8.86□□□□□ -0.99
HIPK1-201ENST00000340480 PPP4R3BQ5MIZ7 849 aa8.86□□□□□ -0.99
HIPK1-201ENST00000340480 CTCFLQ8NI51 663 aaPredicted RBP8.86□□□□□ -0.99
HIPK1-201ENST00000340480 LPIN2Q92539 896 aa8.86□□□□□ -0.99
HIPK1-201ENST00000340480 EAF2Q96CJ1 260 aaPredicted RBP8.86□□□□□ -0.99
HIPK1-201ENST00000340480 SHPRHQ149N8 1683 aa8.86□□□□□ -0.99
HIPK1-201ENST00000340480 BMP15O95972 392 aa8.85□□□□□ -0.99
HIPK1-201ENST00000340480 RPGRQ92834 1020 aaKnown RBP8.85□□□□□ -0.99
HIPK1-201ENST00000340480 CCP110O43303 1012 aa8.85□□□□□ -0.99
HIPK1-201ENST00000340480 MFSD6Q6ZSS7 791 aa8.85□□□□□ -0.99
HIPK1-201ENST00000340480 DZIP1Q86YF9 867 aaKnown RBP8.85□□□□□ -0.99
HIPK1-201ENST00000340480 MYO5BQ9ULV0 1848 aa8.85□□□□□ -0.99
HIPK1-201ENST00000340480 TRIM21P19474 475 aaKnown RBP8.85□□□□□ -0.99
HIPK1-201ENST00000340480 RPS6KB1P23443 525 aa8.85□□□□□ -0.99
HIPK1-201ENST00000340480 RFC4P35249 363 aa8.85□□□□□ -0.99
HIPK1-201ENST00000340480 SNRKQ9NRH2 765 aa8.85□□□□□ -0.99
HIPK1-201ENST00000340480 RTCBQ9Y3I0 505 aaKnown RBP8.85□□□□□ -0.99
HIPK1-201ENST00000340480 SLC9C2Q5TAH2 1124 aa8.85□□□□□ -0.99
HIPK1-201ENST00000340480 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.85□□□□□ -0.99
HIPK1-201ENST00000340480 HAUS7Q99871 368 aa8.85□□□□□ -0.99
HIPK1-201ENST00000340480 PYM1Q9BRP8 204 aaKnown RBP8.85□□□□□ -0.99
HIPK1-201ENST00000340480 CRNKL1Q9BZJ0 848 aaKnown RBP8.85□□□□□ -0.99
HIPK1-201ENST00000340480 AXIN2Q9Y2T1 843 aa8.85□□□□□ -0.99
HIPK1-201ENST00000340480 ZNF335Q9H4Z2 1342 aaPredicted RBP8.85□□□□□ -0.99
HIPK1-201ENST00000340480 GOLGA8AA7E2F4 631 aa8.85□□□□□ -0.99
HIPK1-201ENST00000340480 ITGA6P23229 1130 aa8.85□□□□□ -0.99
HIPK1-201ENST00000340480 BICDL1Q6ZP65 573 aa8.85□□□□□ -0.99
HIPK1-201ENST00000340480 RNF214Q8ND24 703 aa8.85□□□□□ -0.99
HIPK1-201ENST00000340480 IFIT3O14879 490 aaKnown RBP8.85□□□□□ -0.99
HIPK1-201ENST00000340480 PROSER3Q2NL68 480 aa8.85□□□□□ -0.99
HIPK1-201ENST00000340480 ESR2Q92731 530 aa8.85□□□□□ -0.99
HIPK1-201ENST00000340480 IARSP41252 1262 aaKnown RBP8.84□□□□□ -0.99
HIPK1-201ENST00000340480 ST5P78524 1137 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 PDE4BQ07343 736 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 KIF1AQ12756 1690 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 SLC27A2O14975 620 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 EPS15P42566 896 aa8.84□□□□□ -0.99
HIPK1-201ENST00000340480 TRIM28Q13263 835 aaKnown RBP8.84□□□□□ -0.99
HIPK1-201ENST00000340480 JARID2Q92833 1246 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms