RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 NBPF5PQ86XG9 351 aaPredicted RBP8.74□□□□□ -1.01
NUP43-201ENST00000340413 PDE8BO95263 885 aa8.73□□□□□ -1.01
NUP43-201ENST00000340413 MFAP1P55081 439 aaKnown RBP8.73□□□□□ -1.01
NUP43-201ENST00000340413 TAF7LQ5H9L4 462 aa8.73□□□□□ -1.01
NUP43-201ENST00000340413 EAF2Q96CJ1 260 aaPredicted RBP8.73□□□□□ -1.01
NUP43-201ENST00000340413 C10orf71Q711Q0 1435 aa8.73□□□□□ -1.01
NUP43-201ENST00000340413 POLRMTO00411 1230 aaKnown RBP8.73□□□□□ -1.01
NUP43-201ENST00000340413 SLC5A1P13866 664 aa8.73□□□□□ -1.01
NUP43-201ENST00000340413 TFCP2Q12800 502 aa8.73□□□□□ -1.01
NUP43-201ENST00000340413 ZSCAN25Q6NSZ9 544 aa8.73□□□□□ -1.01
NUP43-201ENST00000340413 ANKRD18AQ8IVF6 992 aa8.73□□□□□ -1.01
NUP43-201ENST00000340413 KCNB2Q92953 911 aa8.73□□□□□ -1.01
NUP43-201ENST00000340413 BRIP1Q9BX63 1249 aa8.73□□□□□ -1.01
NUP43-201ENST00000340413 ZNF804BA4D1E1 1349 aa8.73□□□□□ -1.01
NUP43-201ENST00000340413 NFIXQ14938 502 aa8.73□□□□□ -1.01
NUP43-201ENST00000340413 CCDC158Q5M9N0 1113 aa8.73□□□□□ -1.01
NUP43-201ENST00000340413 PNPLA7Q6ZV29 1317 aa8.73□□□□□ -1.01
NUP43-201ENST00000340413 RBM17Q96I25 401 aaKnown RBP8.73□□□□□ -1.01
NUP43-201ENST00000340413 GREM2Q9H772 168 aa8.73□□□□□ -1.01
NUP43-201ENST00000340413 LEMD3Q9Y2U8 911 aa8.73□□□□□ -1.01
NUP43-201ENST00000340413 RBM19Q9Y4C8 960 aaKnown RBP8.73□□□□□ -1.01
NUP43-201ENST00000340413 ZMYM6O95789 1325 aa8.72□□□□□ -1.01
NUP43-201ENST00000340413 BBOX1O75936 387 aa8.72□□□□□ -1.01
NUP43-201ENST00000340413 GRAPQ13588 217 aa8.72□□□□□ -1.01
NUP43-201ENST00000340413 SLC15A2Q16348 729 aa8.72□□□□□ -1.01
NUP43-201ENST00000340413 TBC1D9Q6ZT07 1266 aa8.72□□□□□ -1.01
NUP43-201ENST00000340413 CNBD1Q8NA66 436 aa8.72□□□□□ -1.01
NUP43-201ENST00000340413 GRAPLQ8TC17 118 aaPredicted RBP8.72□□□□□ -1.01
NUP43-201ENST00000340413 PODXL2Q9NZ53 605 aa8.72□□□□□ -1.01
NUP43-201ENST00000340413 TAOK2Q9UL54 1235 aa8.72□□□□□ -1.01
NUP43-201ENST00000340413 DCAF8L1A6NGE4 600 aa8.72□□□□□ -1.01
NUP43-201ENST00000340413 GPTP24298 496 aa8.72□□□□□ -1.01
NUP43-201ENST00000340413 ANP32AP39687 249 aaKnown RBP8.72□□□□□ -1.01
NUP43-201ENST00000340413 ERFEQ4G0M1 354 aa8.72□□□□□ -1.01
NUP43-201ENST00000340413 STYK1Q6J9G0 422 aa8.72□□□□□ -1.01
NUP43-201ENST00000340413 HELLSQ9NRZ9 838 aa8.72□□□□□ -1.01
NUP43-201ENST00000340413 PSME4Q14997 1843 aa8.72□□□□□ -1.01
NUP43-201ENST00000340413 CHMLP26374 656 aa8.72□□□□□ -1.01
NUP43-201ENST00000340413 PDE6BP35913 854 aa8.72□□□□□ -1.01
NUP43-201ENST00000340413 CC2D2BQ6DHV5 1058 aa8.72□□□□□ -1.01
NUP43-201ENST00000340413 LDHAL6AQ6ZMR3 332 aa8.72□□□□□ -1.01
NUP43-201ENST00000340413 VPS33BQ9H267 617 aa8.72□□□□□ -1.01
NUP43-201ENST00000340413 PA2G4Q9UQ80 394 aaKnown RBP8.72□□□□□ -1.01
NUP43-201ENST00000340413 SALL1Q9NSC2 1324 aa8.71□□□□□ -1.01
NUP43-201ENST00000340413 SMARCA5O60264 1052 aaPredicted RBP8.71□□□□□ -1.01
NUP43-201ENST00000340413 ATP2B3Q16720 1220 aa8.71□□□□□ -1.01
NUP43-201ENST00000340413 CERS3Q8IU89 383 aa8.71□□□□□ -1.01
NUP43-201ENST00000340413 SNX21Q969T3 373 aa8.71□□□□□ -1.01
NUP43-201ENST00000340413 ESYT1Q9BSJ8 1104 aa8.71□□□□□ -1.01
NUP43-201ENST00000340413 TIAM2Q8IVF5 1701 aa8.71□□□□□ -1.01
NUP43-201ENST00000340413 MED23Q9ULK4 1368 aa8.71□□□□□ -1.02
NUP43-201ENST00000340413 IFIT1P09914 478 aaKnown RBP8.71□□□□□ -1.02
NUP43-201ENST00000340413 MCCP23508 829 aa8.71□□□□□ -1.02
NUP43-201ENST00000340413 DBNLQ9UJU6 430 aaKnown RBP8.71□□□□□ -1.02
NUP43-201ENST00000340413 SERPINB2P05120 415 aa8.71□□□□□ -1.02
NUP43-201ENST00000340413 ZNF827Q17R98 1081 aa8.71□□□□□ -1.02
NUP43-201ENST00000340413 PRR5LQ6MZQ0 368 aa8.71□□□□□ -1.02
NUP43-201ENST00000340413 DDX46Q7L014 1031 aaKnown RBP8.71□□□□□ -1.02
NUP43-201ENST00000340413 MPHOSPH8Q99549 860 aa8.71□□□□□ -1.02
NUP43-201ENST00000340413 ZNF330Q9Y3S2 320 aaPredicted RBP8.71□□□□□ -1.02
NUP43-201ENST00000340413 IRS2Q9Y4H2 1338 aa8.7□□□□□ -1.02
NUP43-201ENST00000340413 CCDC88AQ3V6T2 1871 aa8.7□□□□□ -1.02
NUP43-201ENST00000340413 A0A1B0GUL7 405 aa8.7□□□□□ -1.02
NUP43-201ENST00000340413 METTL24Q5JXM2 366 aa8.7□□□□□ -1.02
NUP43-201ENST00000340413 CNNM1Q9NRU3 951 aa8.7□□□□□ -1.02
NUP43-201ENST00000340413 C16orf71Q8IYS4 520 aaPredicted RBP8.7□□□□□ -1.02
NUP43-201ENST00000340413 KBTBD3Q8NAB2 608 aa8.7□□□□□ -1.02
NUP43-201ENST00000340413 GNL3LQ9NVN8 582 aaKnown RBP8.7□□□□□ -1.02
NUP43-201ENST00000340413 SOCS7O14512 581 aa8.7□□□□□ -1.02
NUP43-201ENST00000340413 SGSM2O43147 1006 aa8.7□□□□□ -1.02
NUP43-201ENST00000340413 NPR1P16066 1061 aa8.7□□□□□ -1.02
NUP43-201ENST00000340413 SRP68Q9UHB9 627 aaKnown RBP8.7□□□□□ -1.02
NUP43-201ENST00000340413 ZNF646O15015 1829 aaPredicted RBP8.7□□□□□ -1.02
NUP43-201ENST00000340413 ATP2B4P23634 1241 aa8.69□□□□□ -1.02
NUP43-201ENST00000340413 ALDH1B1P30837 517 aa8.69□□□□□ -1.02
NUP43-201ENST00000340413 RPS8P62241 208 aaKnown RBP8.69□□□□□ -1.02
NUP43-201ENST00000340413 TSGA10IPQ3SY00 556 aa8.69□□□□□ -1.02
NUP43-201ENST00000340413 COL23A1Q86Y22 540 aaPredicted RBP8.69□□□□□ -1.02
NUP43-201ENST00000340413 ALDH8A1Q9H2A2 487 aaPredicted RBP8.69□□□□□ -1.02
NUP43-201ENST00000340413 BRCA1P38398 1863 aaKnown RBP8.69□□□□□ -1.02
NUP43-201ENST00000340413 MAP4K4O95819 1239 aaPredicted RBP8.69□□□□□ -1.02
NUP43-201ENST00000340413 MCM2P49736 904 aa8.69□□□□□ -1.02
NUP43-201ENST00000340413 MMP14P50281 582 aa8.69□□□□□ -1.02
NUP43-201ENST00000340413 IL1RAPL2Q9NP60 686 aa8.69□□□□□ -1.02
NUP43-201ENST00000340413 TFCP2L1Q9NZI6 479 aa8.69□□□□□ -1.02
NUP43-201ENST00000340413 CHMP3Q9Y3E7 222 aa8.69□□□□□ -1.02
NUP43-201ENST00000340413 PARP3Q9Y6F1 533 aa8.69□□□□□ -1.02
NUP43-201ENST00000340413 LRRC24Q50LG9 513 aa8.69□□□□□ -1.02
NUP43-201ENST00000340413 SP8Q8IXZ3 490 aa8.69□□□□□ -1.02
NUP43-201ENST00000340413 OTUD7AQ8TE49 926 aaPredicted RBP8.69□□□□□ -1.02
NUP43-201ENST00000340413 XAGE2Q96GT9 111 aa8.69□□□□□ -1.02
NUP43-201ENST00000340413 C22orf23Q9BZE7 217 aa8.69□□□□□ -1.02
NUP43-201ENST00000340413 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.69□□□□□ -1.025e-7■■□□□ 12.6
NUP43-201ENST00000340413 HMG20BQ9P0W2 317 aa8.69□□□□□ -1.02
NUP43-201ENST00000340413 XDHP47989 1333 aa8.68□□□□□ -1.02
NUP43-201ENST00000340413 FKBP1AP62942 108 aaKnown RBP8.68□□□□□ -1.02
NUP43-201ENST00000340413 RABEP1Q15276 862 aa8.68□□□□□ -1.02
NUP43-201ENST00000340413 NUTM1Q86Y26 1132 aa8.68□□□□□ -1.02
NUP43-201ENST00000340413 USP26Q9BXU7 913 aa8.68□□□□□ -1.02
NUP43-201ENST00000340413 GTF2E1P29083 439 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms