RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 AKAP2Q9Y2D5 859 aa25.78■■□□□ 1.72
VRK2-201ENST00000340157 HAUS7Q99871 368 aa25.77■■□□□ 1.72
VRK2-201ENST00000340157 SGSM2O43147 1006 aa25.76■■□□□ 1.71
VRK2-201ENST00000340157 GYS1P13807 737 aa25.76■■□□□ 1.71
VRK2-201ENST00000340157 ZNF827Q17R98 1081 aa25.76■■□□□ 1.71
VRK2-201ENST00000340157 XAGE2Q96GT9 111 aa25.76■■□□□ 1.71
VRK2-201ENST00000340157 CCDC24Q8N4L8 307 aa25.75■■□□□ 1.71
VRK2-201ENST00000340157 CARMIL3Q8ND23 1372 aa25.75■■□□□ 1.71
VRK2-201ENST00000340157 PDE8BO95263 885 aa25.74■■□□□ 1.71
VRK2-201ENST00000340157 GTF2E1P29083 439 aaPredicted RBP25.74■■□□□ 1.71
VRK2-201ENST00000340157 ATP2B3Q16720 1220 aa25.74■■□□□ 1.71
VRK2-201ENST00000340157 CWC27Q6UX04 472 aaKnown RBP25.74■■□□□ 1.71
VRK2-201ENST00000340157 TPTE2Q6XPS3 522 aa25.74■■□□□ 1.71
VRK2-201ENST00000340157 AKT1S1Q96B36 256 aa25.74■■□□□ 1.71
VRK2-201ENST00000340157 AKAP11Q9UKA4 1901 aa25.74■■□□□ 1.71
VRK2-201ENST00000340157 MROH5Q6ZUA9 1318 aa25.74■■□□□ 1.71
VRK2-201ENST00000340157 HELBQ8NG08 1087 aaPredicted RBP25.72■■□□□ 1.71
VRK2-201ENST00000340157 DNAJC2Q99543 621 aaKnown RBP25.72■■□□□ 1.71
VRK2-201ENST00000340157 MPHOSPH8Q99549 860 aa25.72■■□□□ 1.71
VRK2-201ENST00000340157 ANO2Q9NQ90 1003 aa25.72■■□□□ 1.71
VRK2-201ENST00000340157 DIAPH3Q9NSV4 1193 aa25.72■■□□□ 1.71
VRK2-201ENST00000340157 FSD1Q9BTV5 496 aa25.72■■□□□ 1.71
VRK2-201ENST00000340157 TBC1D2Q9BYX2 928 aa25.72■■□□□ 1.71
VRK2-201ENST00000340157 FGFR2P21802 821 aa25.71■■□□□ 1.71
VRK2-201ENST00000340157 IGHMBP2P38935 993 aaKnown RBP25.7■■□□□ 1.71
VRK2-201ENST00000340157 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.7■■□□□ 1.71
VRK2-201ENST00000340157 FAM227BQ96M60 508 aa25.7■■□□□ 1.71
VRK2-201ENST00000340157 CDC5LQ99459 802 aaKnown RBP25.7■■□□□ 1.7
VRK2-201ENST00000340157 TM4SF1P30408 202 aa25.69■■□□□ 1.7
VRK2-201ENST00000340157 NMIQ13287 307 aaPredicted RBP25.69■■□□□ 1.7
VRK2-201ENST00000340157 DDX46Q7L014 1031 aaKnown RBP25.69■■□□□ 1.7
VRK2-201ENST00000340157 LSG1Q9H089 658 aaKnown RBP25.69■■□□□ 1.7
VRK2-201ENST00000340157 SNAP23O00161 211 aa25.68■■□□□ 1.7
VRK2-201ENST00000340157 TAF5LO75529 589 aa25.68■■□□□ 1.7
VRK2-201ENST00000340157 IFIT1P09914 478 aaKnown RBP25.68■■□□□ 1.7
VRK2-201ENST00000340157 SCARF1Q14162 830 aa25.68■■□□□ 1.7
VRK2-201ENST00000340157 PUM3Q15397 648 aaKnown RBP25.68■■□□□ 1.7
VRK2-201ENST00000340157 NLRP3Q96P20 1036 aa25.68■■□□□ 1.7
VRK2-201ENST00000340157 RFX7Q2KHR2 1363 aa25.68■■□□□ 1.7
VRK2-201ENST00000340157 A0A0D9SFI3 127 aa25.68■■□□□ 1.7
VRK2-201ENST00000340157 CHGBP05060 677 aa25.68■■□□□ 1.7
VRK2-201ENST00000340157 CELF1Q92879 486 aaKnown RBP25.68■■□□□ 1.7
VRK2-201ENST00000340157 PAG1Q9NWQ8 432 aa25.68■■□□□ 1.7
VRK2-201ENST00000340157 HIP1O00291 1037 aa25.67■■□□□ 1.7
VRK2-201ENST00000340157 HMGB2P26583 209 aaKnown RBP25.67■■□□□ 1.7
VRK2-201ENST00000340157 CCDC158Q5M9N0 1113 aa25.67■■□□□ 1.7
VRK2-201ENST00000340157 SNRKQ9NRH2 765 aa25.67■■□□□ 1.7
VRK2-201ENST00000340157 TFCP2L1Q9NZI6 479 aa25.67■■□□□ 1.7
VRK2-201ENST00000340157 GOLIM4O00461 696 aa25.66■■□□□ 1.7
VRK2-201ENST00000340157 BECN1Q14457 450 aa25.66■■□□□ 1.7
VRK2-201ENST00000340157 TTC39AQ5SRH9 613 aa25.66■■□□□ 1.7
VRK2-201ENST00000340157 GORABQ5T7V8 394 aa25.66■■□□□ 1.7
VRK2-201ENST00000340157 ANKRD18AQ8IVF6 992 aa25.66■■□□□ 1.7
VRK2-201ENST00000340157 CNBD1Q8NA66 436 aa25.66■■□□□ 1.7
VRK2-201ENST00000340157 KBTBD3Q8NAB2 608 aa25.66■■□□□ 1.7
VRK2-201ENST00000340157 RUFY2Q8WXA3 655 aa25.66■■□□□ 1.7
VRK2-201ENST00000340157 LPIN2Q92539 896 aa25.66■■□□□ 1.7
VRK2-201ENST00000340157 RAD50Q92878 1312 aa25.66■■□□□ 1.7
VRK2-201ENST00000340157 EPB41L2O43491 1005 aaKnown RBP25.66■■□□□ 1.7
VRK2-201ENST00000340157 CHRNDQ07001 517 aa25.66■■□□□ 1.7
VRK2-201ENST00000340157 DDR1Q08345 913 aa25.66■■□□□ 1.7
VRK2-201ENST00000340157 PRR5LQ6MZQ0 368 aa25.66■■□□□ 1.7
VRK2-201ENST00000340157 COL23A1Q86Y22 540 aaPredicted RBP25.66■■□□□ 1.7
VRK2-201ENST00000340157 ANTXR1Q9H6X2 564 aa25.66■■□□□ 1.7
VRK2-201ENST00000340157 PALD1Q9ULE6 856 aa25.66■■□□□ 1.7
VRK2-201ENST00000340157 MED23Q9ULK4 1368 aa25.65■■□□□ 1.7
VRK2-201ENST00000340157 CD2BP2O95400 341 aaKnown RBP25.65■■□□□ 1.7
VRK2-201ENST00000340157 MYO5AQ9Y4I1 1855 aaKnown RBP25.65■■□□□ 1.7
VRK2-201ENST00000340157 MYH7P12883 1935 aa25.65■■□□□ 1.7
VRK2-201ENST00000340157 BSDC1Q9NW68 430 aaPredicted RBP25.64■■□□□ 1.7
VRK2-201ENST00000340157 PI16Q6UXB8 463 aa25.64■■□□□ 1.69
VRK2-201ENST00000340157 SNX21Q969T3 373 aa25.64■■□□□ 1.69
VRK2-201ENST00000340157 MCAMP43121 646 aa25.63■■□□□ 1.69
VRK2-201ENST00000340157 PHKA1P46020 1223 aa25.63■■□□□ 1.69
VRK2-201ENST00000340157 PTH1RQ03431 593 aa25.63■■□□□ 1.69
VRK2-201ENST00000340157 ZNF512BQ96KM6 892 aaPredicted RBP25.63■■□□□ 1.69
VRK2-201ENST00000340157 DAXXQ9UER7 740 aaPredicted RBP25.63■■□□□ 1.69
VRK2-201ENST00000340157 SERPINB2P05120 415 aa25.62■■□□□ 1.69
VRK2-201ENST00000340157 CCDC102BQ68D86 513 aa25.62■■□□□ 1.69
VRK2-201ENST00000340157 NRXN2Q9P2S2 1712 aa25.62■■□□□ 1.69
VRK2-201ENST00000340157 POLRMTO00411 1230 aaKnown RBP25.62■■□□□ 1.69
VRK2-201ENST00000340157 NPHP1O15259 732 aa25.62■■□□□ 1.69
VRK2-201ENST00000340157 HSPA4P34932 840 aa25.62■■□□□ 1.69
VRK2-201ENST00000340157 RABEP1Q15276 862 aa25.62■■□□□ 1.69
VRK2-201ENST00000340157 ZNF589Q86UQ0 364 aaPredicted RBP25.62■■□□□ 1.69
VRK2-201ENST00000340157 IL17RAQ96F46 866 aa25.62■■□□□ 1.69
VRK2-201ENST00000340157 SLC5A1P13866 664 aa25.61■■□□□ 1.69
VRK2-201ENST00000340157 ZAP70P43403 619 aa25.61■■□□□ 1.69
VRK2-201ENST00000340157 FKBP4Q02790 459 aaKnown RBP eCLIP25.61■■□□□ 1.69
VRK2-201ENST00000340157 MINPP1Q9UNW1 487 aa25.61■■□□□ 1.69
VRK2-201ENST00000340157 ANKRD31Q8N7Z5 1873 aa25.6■■□□□ 1.69
VRK2-201ENST00000340157 ARID4AP29374 1257 aaPredicted RBP25.6■■□□□ 1.69
VRK2-201ENST00000340157 RPS8P62241 208 aaKnown RBP25.6■■□□□ 1.69
VRK2-201ENST00000340157 SLFNL1Q499Z3 407 aa25.6■■□□□ 1.69
VRK2-201ENST00000340157 CAMKK2Q96RR4 588 aa25.6■■□□□ 1.69
VRK2-201ENST00000340157 PNPLA7Q6ZV29 1317 aa25.6■■□□□ 1.69
VRK2-201ENST00000340157 WTIPA6NIX2 430 aaPredicted RBP25.6■■□□□ 1.69
VRK2-201ENST00000340157 CCDC171Q6TFL3 1326 aa25.59■■□□□ 1.69
VRK2-201ENST00000340157 EZH2Q15910 746 aaKnown RBP25.59■■□□□ 1.69
VRK2-201ENST00000340157 KIAA1211Q6ZU35 1233 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms