RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 WDR33Q9C0J8 1336 aaKnown RBP24.96■■□□□ 1.59
ITGA4-202ENST00000339307 SHTN1A0MZ66 631 aa24.95■■□□□ 1.59
ITGA4-202ENST00000339307 GLIS2Q9BZE0 524 aaPredicted RBP24.95■■□□□ 1.59
ITGA4-202ENST00000339307 ZNF408Q9H9D4 720 aa24.95■■□□□ 1.59
ITGA4-202ENST00000339307 UFL1O94874 794 aa24.95■■□□□ 1.58
ITGA4-202ENST00000339307 SLC4A2P04920 1241 aa24.95■■□□□ 1.58
ITGA4-202ENST00000339307 TRPM4Q8TD43 1214 aa24.95■■□□□ 1.58
ITGA4-202ENST00000339307 ZNF316A6NFI3 1004 aaPredicted RBP24.94■■□□□ 1.58
ITGA4-202ENST00000339307 HIRAP54198 1017 aaPredicted RBP24.94■■□□□ 1.58
ITGA4-202ENST00000339307 CST9Q5W186 159 aa24.94■■□□□ 1.58
ITGA4-202ENST00000339307 ANKRD18AQ8IVF6 992 aa24.94■■□□□ 1.58
ITGA4-202ENST00000339307 KCNQ5Q9NR82 932 aa24.94■■□□□ 1.58
ITGA4-202ENST00000339307 GGA1Q9UJY5 639 aa24.94■■□□□ 1.58
ITGA4-202ENST00000339307 CELF2O95319 508 aaKnown RBP24.93■■□□□ 1.58
ITGA4-202ENST00000339307 RBM26Q5T8P6 1007 aaKnown RBP24.93■■□□□ 1.58
ITGA4-202ENST00000339307 CTCFP49711 727 aaPredicted RBP24.92■■□□□ 1.58
ITGA4-202ENST00000339307 CWF19L2Q2TBE0 894 aaKnown RBP24.92■■□□□ 1.58
ITGA4-202ENST00000339307 CYP4F22Q6NT55 531 aa24.92■■□□□ 1.58
ITGA4-202ENST00000339307 SAMD7Q7Z3H4 446 aa24.92■■□□□ 1.58
ITGA4-202ENST00000339307 IGKV5-2P06315 115 aa24.91■■□□□ 1.58
ITGA4-202ENST00000339307 ECE1P42892 770 aa24.91■■□□□ 1.58
ITGA4-202ENST00000339307 TBC1D10BQ4KMP7 808 aaPredicted RBP24.91■■□□□ 1.58
ITGA4-202ENST00000339307 G2E3Q7L622 706 aa24.91■■□□□ 1.58
ITGA4-202ENST00000339307 ZC3H15Q8WU90 426 aaKnown RBP24.91■■□□□ 1.58
ITGA4-202ENST00000339307 CAPNS2Q96L46 248 aa24.91■■□□□ 1.58
ITGA4-202ENST00000339307 CTSWP56202 376 aa24.9■■□□□ 1.58
ITGA4-202ENST00000339307 MAP2K1Q02750 393 aaPredicted RBP24.9■■□□□ 1.58
ITGA4-202ENST00000339307 CDC37L1Q7L3B6 337 aa24.9■■□□□ 1.58
ITGA4-202ENST00000339307 DPF2Q92785 391 aa24.9■■□□□ 1.58
ITGA4-202ENST00000339307 WBP1LQ9NX94 342 aa24.9■■□□□ 1.58
ITGA4-202ENST00000339307 PODXL2Q9NZ53 605 aa24.9■■□□□ 1.58
ITGA4-202ENST00000339307 TRPM7Q96QT4 1865 aa24.9■■□□□ 1.58
ITGA4-202ENST00000339307 CDC5LQ99459 802 aaKnown RBP24.89■■□□□ 1.58
ITGA4-202ENST00000339307 TLL2Q9Y6L7 1015 aa24.89■■□□□ 1.58
ITGA4-202ENST00000339307 IL16Q14005 1332 aa24.89■■□□□ 1.58
ITGA4-202ENST00000339307 USP48Q86UV5 1035 aa24.88■■□□□ 1.57
ITGA4-202ENST00000339307 PGAP2Q9UHJ9 254 aa24.88■■□□□ 1.57
ITGA4-202ENST00000339307 NEURL1BA8MQ27 555 aa24.87■■□□□ 1.57
ITGA4-202ENST00000339307 RPS12P25398 132 aaKnown RBP24.87■■□□□ 1.57
ITGA4-202ENST00000339307 LBX1P52954 281 aa24.87■■□□□ 1.57
ITGA4-202ENST00000339307 FKBP5Q13451 457 aaPredicted RBP24.87■■□□□ 1.57
ITGA4-202ENST00000339307 UBE3BQ7Z3V4 1068 aa24.87■■□□□ 1.57
ITGA4-202ENST00000339307 BEGAINQ9BUH8 593 aa24.87■■□□□ 1.57
ITGA4-202ENST00000339307 RTL9Q8NET4 1388 aa24.87■■□□□ 1.57
ITGA4-202ENST00000339307 XDHP47989 1333 aa24.86■■□□□ 1.57
ITGA4-202ENST00000339307 FANCIQ9NVI1 1328 aa24.86■■□□□ 1.57
ITGA4-202ENST00000339307 FLIIQ13045 1269 aa24.86■■□□□ 1.57
ITGA4-202ENST00000339307 TTLL11Q8NHH1 800 aa24.86■■□□□ 1.57
ITGA4-202ENST00000339307 GREM2Q9H772 168 aa24.86■■□□□ 1.57
ITGA4-202ENST00000339307 ATP2B4P23634 1241 aa24.85■■□□□ 1.57
ITGA4-202ENST00000339307 FAM9BQ8IZU0 186 aa24.85■■□□□ 1.57
ITGA4-202ENST00000339307 DCPSQ96C86 337 aaKnown RBP24.85■■□□□ 1.57
ITGA4-202ENST00000339307 PRDM10Q9NQV6 1147 aa24.85■■□□□ 1.57
ITGA4-202ENST00000339307 EGFRP00533 1210 aa24.84■■□□□ 1.57
ITGA4-202ENST00000339307 DLK2Q6UY11 383 aa24.84■■□□□ 1.57
ITGA4-202ENST00000339307 KRT26Q7Z3Y9 468 aa24.84■■□□□ 1.57
ITGA4-202ENST00000339307 SAPCD2Q86UD0 394 aa24.84■■□□□ 1.57
ITGA4-202ENST00000339307 AOC2O75106 756 aa24.83■■□□□ 1.57
ITGA4-202ENST00000339307 VIL1P09327 827 aaKnown RBP24.83■■□□□ 1.57
ITGA4-202ENST00000339307 EXOSC9Q06265 439 aaKnown RBP24.83■■□□□ 1.57
ITGA4-202ENST00000339307 KIF4BQ2VIQ3 1234 aa24.83■■□□□ 1.57
ITGA4-202ENST00000339307 WDR63Q8IWG1 891 aa24.83■■□□□ 1.57
ITGA4-202ENST00000339307 DNAAF4Q8WXU2 420 aa24.82■■□□□ 1.56
ITGA4-202ENST00000339307 H7C1W4 665 aa24.81■■□□□ 1.56
ITGA4-202ENST00000339307 IGHMBP2P38935 993 aaKnown RBP24.81■■□□□ 1.56
ITGA4-202ENST00000339307 GCKRQ14397 625 aa24.81■■□□□ 1.56
ITGA4-202ENST00000339307 NCBP3Q53F19 620 aaKnown RBP24.81■■□□□ 1.56
ITGA4-202ENST00000339307 FBXW7Q969H0 707 aa24.81■■□□□ 1.56
ITGA4-202ENST00000339307 MYH16Q9H6N6 1097 aa24.81■■□□□ 1.56
ITGA4-202ENST00000339307 BSDC1Q9NW68 430 aaPredicted RBP24.81■■□□□ 1.56
ITGA4-202ENST00000339307 MINPP1Q9UNW1 487 aa24.81■■□□□ 1.56
ITGA4-202ENST00000339307 HSPA8P11142 646 aaKnown RBP24.8■■□□□ 1.56
ITGA4-202ENST00000339307 WTIPA6NIX2 430 aaPredicted RBP24.79■■□□□ 1.56
ITGA4-202ENST00000339307 ADM5C9JUS6 153 aa24.79■■□□□ 1.56
ITGA4-202ENST00000339307 VAMP4O75379 141 aa24.79■■□□□ 1.56
ITGA4-202ENST00000339307 RSBN1LQ6PCB5 846 aaPredicted RBP24.79■■□□□ 1.56
ITGA4-202ENST00000339307 SPEF2Q9C093 1822 aa24.78■■□□□ 1.56
ITGA4-202ENST00000339307 SCN9AQ15858 1988 aa24.78■■□□□ 1.56
ITGA4-202ENST00000339307 MYH3P11055 1940 aa24.78■■□□□ 1.56
ITGA4-202ENST00000339307 USP17L3A6NCW0 530 aa24.78■■□□□ 1.56
ITGA4-202ENST00000339307 USP17L4A6NCW7 530 aa24.78■■□□□ 1.56
ITGA4-202ENST00000339307 ITGA6P23229 1130 aa24.78■■□□□ 1.56
ITGA4-202ENST00000339307 HUNKP57058 714 aa24.78■■□□□ 1.56
ITGA4-202ENST00000339307 USP17L1Q7RTZ2 530 aa24.78■■□□□ 1.56
ITGA4-202ENST00000339307 SULF1Q8IWU6 871 aa24.78■■□□□ 1.56
ITGA4-202ENST00000339307 AGBL3Q8NEM8 1001 aa24.78■■□□□ 1.56
ITGA4-202ENST00000339307 LINS1Q8NG48 757 aa24.78■■□□□ 1.56
ITGA4-202ENST00000339307 MPHOSPH8Q99549 860 aa24.78■■□□□ 1.56
ITGA4-202ENST00000339307 GGA3Q9NZ52 723 aa24.78■■□□□ 1.56
ITGA4-202ENST00000339307 MAP2K2P36507 400 aa24.77■■□□□ 1.56
ITGA4-202ENST00000339307 CCT4P50991 539 aaKnown RBP24.77■■□□□ 1.56
ITGA4-202ENST00000339307 PODNQ7Z5L7 613 aa24.77■■□□□ 1.56
ITGA4-202ENST00000339307 TSKSQ9UJT2 592 aa24.77■■□□□ 1.56
ITGA4-202ENST00000339307 FAM161AQ3B820 660 aa24.76■■□□□ 1.55
ITGA4-202ENST00000339307 C2orf69Q8N8R5 385 aa24.76■■□□□ 1.55
ITGA4-202ENST00000339307 CHMP3Q9Y3E7 222 aa24.76■■□□□ 1.55
ITGA4-202ENST00000339307 ASTN2O75129 1339 aaPredicted RBP24.75■■□□□ 1.55
ITGA4-202ENST00000339307 F6X3S4 739 aa24.75■■□□□ 1.55
ITGA4-202ENST00000339307 USP17L8P0C7I0 530 aa24.75■■□□□ 1.55
ITGA4-202ENST00000339307 SCARF1Q14162 830 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms