RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 CCDC191Q8NCU4 936 aa18.36■□□□□ 0.53
COMMD4-202ENST00000338995 TBC1D16Q8TBP0 767 aa18.36■□□□□ 0.53
COMMD4-202ENST00000338995 TBC1D10BQ4KMP7 808 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-202ENST00000338995 CCDC102AQ96A19 550 aa18.35■□□□□ 0.53
COMMD4-202ENST00000338995 PODXL2Q9NZ53 605 aa18.35■□□□□ 0.53
COMMD4-202ENST00000338995 GGA1Q9UJY5 639 aa18.35■□□□□ 0.53
COMMD4-202ENST00000338995 CCDC85CA6NKD9 419 aa18.34■□□□□ 0.53
COMMD4-202ENST00000338995 ELL2O00472 640 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-202ENST00000338995 PDE8AO60658 829 aa18.34■□□□□ 0.53
COMMD4-202ENST00000338995 ZNF853P0CG23 659 aa18.34■□□□□ 0.53
COMMD4-202ENST00000338995 CCDC30Q5VVM6 783 aa18.34■□□□□ 0.53
COMMD4-202ENST00000338995 MYD88Q99836 296 aa18.34■□□□□ 0.53
COMMD4-202ENST00000338995 CWC25Q9NXE8 425 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-202ENST00000338995 LAMB2P55268 1798 aa18.33■□□□□ 0.53
COMMD4-202ENST00000338995 SHTN1A0MZ66 631 aa18.33■□□□□ 0.52
COMMD4-202ENST00000338995 APAF1O14727 1248 aa18.33■□□□□ 0.52
COMMD4-202ENST00000338995 PCCAP05165 728 aaPredicted RBP18.33■□□□□ 0.52
COMMD4-202ENST00000338995 VIL1P09327 827 aaKnown RBP18.33■□□□□ 0.52
COMMD4-202ENST00000338995 SULF1Q8IWU6 871 aa18.33■□□□□ 0.52
COMMD4-202ENST00000338995 PHAXQ9H814 394 aaKnown RBP18.33■□□□□ 0.52
COMMD4-202ENST00000338995 GBA2Q9HCG7 927 aaPredicted RBP18.33■□□□□ 0.52
COMMD4-202ENST00000338995 UFL1O94874 794 aa18.32■□□□□ 0.52
COMMD4-202ENST00000338995 RGMBQ6NW40 437 aa18.32■□□□□ 0.52
COMMD4-202ENST00000338995 ANKRD18AQ8IVF6 992 aa18.32■□□□□ 0.52
COMMD4-202ENST00000338995 PRKRIP1Q9H875 184 aaPredicted RBP18.32■□□□□ 0.52
COMMD4-202ENST00000338995 TSKSQ9UJT2 592 aa18.32■□□□□ 0.52
COMMD4-202ENST00000338995 KIF4BQ2VIQ3 1234 aa18.31■□□□□ 0.52
COMMD4-202ENST00000338995 AGBL3Q8NEM8 1001 aa18.31■□□□□ 0.52
COMMD4-202ENST00000338995 METTL22Q9BUU2 404 aaPredicted RBP18.31■□□□□ 0.52
COMMD4-202ENST00000338995 SEC31BQ9NQW1 1179 aa18.31■□□□□ 0.52
COMMD4-202ENST00000338995 KCNQ5Q9NR82 932 aa18.31■□□□□ 0.52
COMMD4-202ENST00000338995 TAF1P21675 1872 aa18.31■□□□□ 0.52
COMMD4-202ENST00000338995 ATP2B4P23634 1241 aa18.3■□□□□ 0.52
COMMD4-202ENST00000338995 NEXNQ0ZGT2 675 aa18.3■□□□□ 0.52
COMMD4-202ENST00000338995 CDC5LQ99459 802 aaKnown RBP18.3■□□□□ 0.52
COMMD4-202ENST00000338995 ZNF157P51786 506 aaPredicted RBP18.29■□□□□ 0.52
COMMD4-202ENST00000338995 XDHP47989 1333 aa18.28■□□□□ 0.52
COMMD4-202ENST00000338995 MLLT1Q03111 559 aaPredicted RBP18.28■□□□□ 0.52
COMMD4-202ENST00000338995 RSBN1LQ6PCB5 846 aaPredicted RBP18.28■□□□□ 0.52
COMMD4-202ENST00000338995 PODNQ7Z5L7 613 aa18.28■□□□□ 0.52
COMMD4-202ENST00000338995 REM2Q8IYK8 340 aaPredicted RBP18.28■□□□□ 0.52
COMMD4-202ENST00000338995 STK31Q9BXU1 1019 aa18.28■□□□□ 0.52
COMMD4-202ENST00000338995 KSR2Q6VAB6 950 aa18.27■□□□□ 0.52
COMMD4-202ENST00000338995 C8orf58Q8NAV2 365 aa18.27■□□□□ 0.52
COMMD4-202ENST00000338995 CCDC85AQ96PX6 553 aaPredicted RBP18.27■□□□□ 0.52
COMMD4-202ENST00000338995 RTL9Q8NET4 1388 aa18.27■□□□□ 0.51
COMMD4-202ENST00000338995 THSD7BQ9C0I4 1608 aa18.27■□□□□ 0.51
COMMD4-202ENST00000338995 DDX60Q8IY21 1712 aaKnown RBP18.26■□□□□ 0.51
COMMD4-202ENST00000338995 DUOX1Q9NRD9 1551 aa18.26■□□□□ 0.51
COMMD4-202ENST00000338995 USP17L3A6NCW0 530 aa18.26■□□□□ 0.51
COMMD4-202ENST00000338995 USP17L4A6NCW7 530 aa18.26■□□□□ 0.51
COMMD4-202ENST00000338995 ADM5C9JUS6 153 aa18.26■□□□□ 0.51
COMMD4-202ENST00000338995 EGFRP00533 1210 aa18.26■□□□□ 0.51
COMMD4-202ENST00000338995 USP17L8P0C7I0 530 aa18.26■□□□□ 0.51
COMMD4-202ENST00000338995 DGKZQ13574 1117 aa18.26■□□□□ 0.51
COMMD4-202ENST00000338995 SCARF1Q14162 830 aa18.26■□□□□ 0.51
COMMD4-202ENST00000338995 USP17L1Q7RTZ2 530 aa18.26■□□□□ 0.51
COMMD4-202ENST00000338995 MCOLN1Q9GZU1 580 aa18.26■□□□□ 0.51
COMMD4-202ENST00000338995 SAGE1Q9NXZ1 904 aa18.26■□□□□ 0.51
COMMD4-202ENST00000338995 GGA3Q9NZ52 723 aa18.26■□□□□ 0.51
COMMD4-202ENST00000338995 MAP3K2Q9Y2U5 619 aa18.26■□□□□ 0.51
COMMD4-202ENST00000338995 LRRC37AA6NMS7 1700 aa18.26■□□□□ 0.51
COMMD4-202ENST00000338995 RGS19P49795 217 aa18.25■□□□□ 0.51
COMMD4-202ENST00000338995 ZNF280AP59817 542 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-202ENST00000338995 KIF23Q02241 960 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-202ENST00000338995 FAM161AQ3B820 660 aa18.25■□□□□ 0.51
COMMD4-202ENST00000338995 DLK2Q6UY11 383 aa18.25■□□□□ 0.51
COMMD4-202ENST00000338995 JARID2Q92833 1246 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-202ENST00000338995 POLR2AP24928 1970 aaKnown RBP18.24■□□□□ 0.51
COMMD4-202ENST00000338995 PI4KAP2A4QPH2 592 aa18.24■□□□□ 0.51
COMMD4-202ENST00000338995 FKBP1BP68106 108 aa18.24■□□□□ 0.51
COMMD4-202ENST00000338995 OGFOD1Q8N543 542 aa18.24■□□□□ 0.51
COMMD4-202ENST00000338995 PI4KAP1Q8N8J0 262 aa18.24■□□□□ 0.51
COMMD4-202ENST00000338995 BSDC1Q9NW68 430 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-202ENST00000338995 FAM155AB1AL88 458 aaPredicted RBP18.23■□□□□ 0.51
COMMD4-202ENST00000338995 MMP14P50281 582 aa18.23■□□□□ 0.51
COMMD4-202ENST00000338995 CTSWP56202 376 aa18.23■□□□□ 0.51
COMMD4-202ENST00000338995 ANGEL2Q5VTE6 544 aaKnown RBP18.23■□□□□ 0.51
COMMD4-202ENST00000338995 CDCA5Q96FF9 252 aa18.23■□□□□ 0.51
COMMD4-202ENST00000338995 ZIC5Q96T25 663 aa18.23■□□□□ 0.51
COMMD4-202ENST00000338995 MYOZ2Q9NPC6 264 aa18.23■□□□□ 0.51
COMMD4-202ENST00000338995 TTLL11Q8NHH1 800 aa18.22■□□□□ 0.51
COMMD4-202ENST00000338995 CASP8AP2Q9UKL3 1982 aa18.22■□□□□ 0.51
COMMD4-202ENST00000338995 PITPNM2Q9BZ72 1349 aa18.22■□□□□ 0.51
COMMD4-202ENST00000338995 TRPA1O75762 1119 aa18.21■□□□□ 0.51
COMMD4-202ENST00000338995 IGHMBP2P38935 993 aaKnown RBP18.21■□□□□ 0.51
COMMD4-202ENST00000338995 MINPP1Q9UNW1 487 aa18.21■□□□□ 0.51
COMMD4-202ENST00000338995 LEMD3Q9Y2U8 911 aa18.21■□□□□ 0.51
COMMD4-202ENST00000338995 SLC10A3P09131 477 aa18.2■□□□□ 0.5
COMMD4-202ENST00000338995 NF2P35240 595 aa18.2■□□□□ 0.5
COMMD4-202ENST00000338995 TSPYL6Q8N831 410 aa18.2■□□□□ 0.5
COMMD4-202ENST00000338995 CSRNP1Q96S65 589 aa18.2■□□□□ 0.5
COMMD4-202ENST00000338995 GMLQ99445 158 aa18.2■□□□□ 0.5
COMMD4-202ENST00000338995 ANKRD2Q9GZV1 360 aa18.2■□□□□ 0.5
COMMD4-202ENST00000338995 COA1Q9GZY4 146 aa18.2■□□□□ 0.5
COMMD4-202ENST00000338995 RNF186Q9NXI6 227 aa18.2■□□□□ 0.5
COMMD4-202ENST00000338995 MYO3BQ8WXR4 1341 aa18.2■□□□□ 0.5
COMMD4-202ENST00000338995 ZNF609O15014 1411 aa18.19■□□□□ 0.5
COMMD4-202ENST00000338995 SLC4A2P04920 1241 aa18.19■□□□□ 0.5
COMMD4-202ENST00000338995 IGKV5-2P06315 115 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms