RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 GLIS2Q9BZE0 524 aaPredicted RBP17.16■□□□□ 0.34
NUDCD3-201ENST00000338427 CNTNAP1P78357 1384 aa17.15■□□□□ 0.34
NUDCD3-201ENST00000338427 H7C1W4 665 aa17.15■□□□□ 0.34
NUDCD3-201ENST00000338427 ECE2O60344 883 aa17.15■□□□□ 0.34
NUDCD3-201ENST00000338427 EGFRP00533 1210 aa17.15■□□□□ 0.34
NUDCD3-201ENST00000338427 FLIIQ13045 1269 aa17.15■□□□□ 0.34
NUDCD3-201ENST00000338427 RBM26Q5T8P6 1007 aaKnown RBP17.15■□□□□ 0.34
NUDCD3-201ENST00000338427 GREM2Q9H772 168 aa17.15■□□□□ 0.34
NUDCD3-201ENST00000338427 ANKIB1Q9P2G1 1089 aa17.15■□□□□ 0.34
NUDCD3-201ENST00000338427 UFL1O94874 794 aa17.14■□□□□ 0.33
NUDCD3-201ENST00000338427 UBE3BQ7Z3V4 1068 aa17.14■□□□□ 0.33
NUDCD3-201ENST00000338427 MICALL2Q8IY33 904 aa17.14■□□□□ 0.33
NUDCD3-201ENST00000338427 CHMP4AQ9BY43 222 aa17.14■□□□□ 0.33
NUDCD3-201ENST00000338427 ZC3H12CQ9C0D7 883 aaKnown RBP17.14■□□□□ 0.33
NUDCD3-201ENST00000338427 ABT1Q9ULW3 272 aaKnown RBP17.14■□□□□ 0.33
NUDCD3-201ENST00000338427 F6X3S4 739 aa17.13■□□□□ 0.33
NUDCD3-201ENST00000338427 CTSWP56202 376 aa17.13■□□□□ 0.33
NUDCD3-201ENST00000338427 NEXNQ0ZGT2 675 aa17.13■□□□□ 0.33
NUDCD3-201ENST00000338427 TBC1D10BQ4KMP7 808 aaPredicted RBP17.13■□□□□ 0.33
NUDCD3-201ENST00000338427 NCBP3Q53F19 620 aaKnown RBP17.13■□□□□ 0.33
NUDCD3-201ENST00000338427 ANKRD18AQ8IVF6 992 aa17.13■□□□□ 0.33
NUDCD3-201ENST00000338427 PODXL2Q9NZ53 605 aa17.13■□□□□ 0.33
NUDCD3-201ENST00000338427 CDHR2Q9BYE9 1310 aa17.13■□□□□ 0.33
NUDCD3-201ENST00000338427 RTL9Q8NET4 1388 aa17.13■□□□□ 0.33
NUDCD3-201ENST00000338427 H7C1D1 291 aa17.12■□□□□ 0.33
NUDCD3-201ENST00000338427 FOXN1O15353 648 aa17.12■□□□□ 0.33
NUDCD3-201ENST00000338427 FKBP5Q13451 457 aaPredicted RBP17.12■□□□□ 0.33
NUDCD3-201ENST00000338427 GCKRQ14397 625 aa17.12■□□□□ 0.33
NUDCD3-201ENST00000338427 USP48Q86UV5 1035 aa17.12■□□□□ 0.33
NUDCD3-201ENST00000338427 EYA3Q99504 573 aa17.12■□□□□ 0.33
NUDCD3-201ENST00000338427 PGAP2Q9UHJ9 254 aa17.12■□□□□ 0.33
NUDCD3-201ENST00000338427 GGA1Q9UJY5 639 aa17.12■□□□□ 0.33
NUDCD3-201ENST00000338427 LRRC37AA6NMS7 1700 aa17.11■□□□□ 0.33
NUDCD3-201ENST00000338427 RASSF10A6NK89 507 aa17.11■□□□□ 0.33
NUDCD3-201ENST00000338427 HSP90B1P14625 803 aaKnown RBP17.11■□□□□ 0.33
NUDCD3-201ENST00000338427 CASP7P55210 303 aa17.11■□□□□ 0.33
NUDCD3-201ENST00000338427 GRM1Q13255 1194 aa17.11■□□□□ 0.33
NUDCD3-201ENST00000338427 DNAAF4Q8WXU2 420 aa17.11■□□□□ 0.33
NUDCD3-201ENST00000338427 MINPP1Q9UNW1 487 aa17.11■□□□□ 0.33
NUDCD3-201ENST00000338427 G3V3G9 751 aa17.1■□□□□ 0.33
NUDCD3-201ENST00000338427 DCAF8Q5TAQ9 597 aa17.1■□□□□ 0.33
NUDCD3-201ENST00000338427 CYP4F22Q6NT55 531 aa17.1■□□□□ 0.33
NUDCD3-201ENST00000338427 CELF2O95319 508 aaKnown RBP17.09■□□□□ 0.33
NUDCD3-201ENST00000338427 VIL1P09327 827 aaKnown RBP17.09■□□□□ 0.33
NUDCD3-201ENST00000338427 DPF2Q92785 391 aa17.09■□□□□ 0.33
NUDCD3-201ENST00000338427 ZNF408Q9H9D4 720 aa17.09■□□□□ 0.33
NUDCD3-201ENST00000338427 ASTN2O75129 1339 aaPredicted RBP17.09■□□□□ 0.33
NUDCD3-201ENST00000338427 WDR33Q9C0J8 1336 aaKnown RBP17.09■□□□□ 0.33
NUDCD3-201ENST00000338427 CAPN15O75808 1086 aa17.08■□□□□ 0.32
NUDCD3-201ENST00000338427 PAXIP1Q6ZW49 1069 aaPredicted RBP17.08■□□□□ 0.32
NUDCD3-201ENST00000338427 TXNRD3Q86VQ6 643 aa17.08■□□□□ 0.32
NUDCD3-201ENST00000338427 TNS4Q8IZW8 715 aa17.08■□□□□ 0.32
NUDCD3-201ENST00000338427 MXD3Q9BW11 206 aa17.08■□□□□ 0.32
NUDCD3-201ENST00000338427 SCN9AQ15858 1988 aa17.08■□□□□ 0.32
NUDCD3-201ENST00000338427 XDHP47989 1333 aa17.07■□□□□ 0.32
NUDCD3-201ENST00000338427 SNAP23O00161 211 aa17.07■□□□□ 0.32
NUDCD3-201ENST00000338427 AOC2O75106 756 aa17.07■□□□□ 0.32
NUDCD3-201ENST00000338427 CSF1RP07333 972 aa17.07■□□□□ 0.32
NUDCD3-201ENST00000338427 ATP2B4P23634 1241 aa17.07■□□□□ 0.32
NUDCD3-201ENST00000338427 FAM161AQ3B820 660 aa17.07■□□□□ 0.32
NUDCD3-201ENST00000338427 LINS1Q8NG48 757 aa17.07■□□□□ 0.32
NUDCD3-201ENST00000338427 CAPNS2Q96L46 248 aa17.07■□□□□ 0.32
NUDCD3-201ENST00000338427 CDC5LQ99459 802 aaKnown RBP17.07■□□□□ 0.32
NUDCD3-201ENST00000338427 BSDC1Q9NW68 430 aaPredicted RBP17.07■□□□□ 0.32
NUDCD3-201ENST00000338427 WBP1LQ9NX94 342 aa17.07■□□□□ 0.32
NUDCD3-201ENST00000338427 POLR2AP24928 1970 aaKnown RBP17.07■□□□□ 0.32
NUDCD3-201ENST00000338427 ITGA6P23229 1130 aa17.06■□□□□ 0.32
NUDCD3-201ENST00000338427 EPHA10Q5JZY3 1008 aa17.06■□□□□ 0.32
NUDCD3-201ENST00000338427 BEND3Q5T5X7 828 aa17.06■□□□□ 0.32
NUDCD3-201ENST00000338427 CDC37L1Q7L3B6 337 aa17.06■□□□□ 0.32
NUDCD3-201ENST00000338427 ZC3H15Q8WU90 426 aaKnown RBP17.06■□□□□ 0.32
NUDCD3-201ENST00000338427 PLA2G12BQ9BX93 195 aa17.06■□□□□ 0.32
NUDCD3-201ENST00000338427 SCAF8Q9UPN6 1271 aaKnown RBP17.06■□□□□ 0.32
NUDCD3-201ENST00000338427 TLL2Q9Y6L7 1015 aa17.06■□□□□ 0.32
NUDCD3-201ENST00000338427 ADM5C9JUS6 153 aa17.05■□□□□ 0.32
NUDCD3-201ENST00000338427 KLRK1P26718 216 aa17.05■□□□□ 0.32
NUDCD3-201ENST00000338427 CCT4P50991 539 aaKnown RBP17.05■□□□□ 0.32
NUDCD3-201ENST00000338427 FOXO4P98177 505 aa17.05■□□□□ 0.32
NUDCD3-201ENST00000338427 HELBQ8NG08 1087 aaPredicted RBP17.05■□□□□ 0.32
NUDCD3-201ENST00000338427 RSBN1LQ6PCB5 846 aaPredicted RBP17.04■□□□□ 0.32
NUDCD3-201ENST00000338427 SAPCD2Q86UD0 394 aa17.04■□□□□ 0.32
NUDCD3-201ENST00000338427 MYH16Q9H6N6 1097 aa17.04■□□□□ 0.32
NUDCD3-201ENST00000338427 TAF5LO75529 589 aa17.03■□□□□ 0.32
NUDCD3-201ENST00000338427 RPS12P25398 132 aaKnown RBP17.03■□□□□ 0.32
NUDCD3-201ENST00000338427 IGHMBP2P38935 993 aaKnown RBP17.03■□□□□ 0.32
NUDCD3-201ENST00000338427 LBX1P52954 281 aa17.03■□□□□ 0.32
NUDCD3-201ENST00000338427 ZNF594Q96JF6 807 aaPredicted RBP17.03■□□□□ 0.32
NUDCD3-201ENST00000338427 ZIC5Q96T25 663 aa17.03■□□□□ 0.32
NUDCD3-201ENST00000338427 GMLQ99445 158 aa17.03■□□□□ 0.32
NUDCD3-201ENST00000338427 TRPM7Q96QT4 1865 aa17.03■□□□□ 0.32
NUDCD3-201ENST00000338427 ZNF521Q96K83 1311 aa17.02■□□□□ 0.32
NUDCD3-201ENST00000338427 USP17L3A6NCW0 530 aa17.02■□□□□ 0.32
NUDCD3-201ENST00000338427 USP17L4A6NCW7 530 aa17.02■□□□□ 0.32
NUDCD3-201ENST00000338427 SCARF1Q14162 830 aa17.02■□□□□ 0.32
NUDCD3-201ENST00000338427 KIF4BQ2VIQ3 1234 aa17.02■□□□□ 0.32
NUDCD3-201ENST00000338427 SLC4A10Q6U841 1118 aa17.02■□□□□ 0.32
NUDCD3-201ENST00000338427 USP17L1Q7RTZ2 530 aa17.02■□□□□ 0.32
NUDCD3-201ENST00000338427 KRT26Q7Z3Y9 468 aa17.02■□□□□ 0.32
NUDCD3-201ENST00000338427 FBXW7Q969H0 707 aa17.02■□□□□ 0.32
NUDCD3-201ENST00000338427 CHMP3Q9Y3E7 222 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms