RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 ZBTB1Q9Y2K1 713 aa6.57□□□□□ -1.36
PRPF4B-201ENST00000337659 EVA1CP58658 441 aa6.57□□□□□ -1.36
PRPF4B-201ENST00000337659 DSCC1Q9BVC3 393 aa6.57□□□□□ -1.36
PRPF4B-201ENST00000337659 ZSWIM6Q9HCJ5 1215 aa6.57□□□□□ -1.36
PRPF4B-201ENST00000337659 RBBP6Q7Z6E9 1792 aaKnown RBP6.57□□□□□ -1.36
PRPF4B-201ENST00000337659 TMEM87AQ8NBN3 555 aa6.56□□□□□ -1.36
PRPF4B-201ENST00000337659 SSFA2P28290 1259 aa6.56□□□□□ -1.36
PRPF4B-201ENST00000337659 ZMYM1Q5SVZ6 1142 aa6.56□□□□□ -1.36
PRPF4B-201ENST00000337659 HMG20BQ9P0W2 317 aa6.56□□□□□ -1.36
PRPF4B-201ENST00000337659 NUTM2BA6NNL0 878 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-201ENST00000337659 NUTM2EB1AL46 878 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-201ENST00000337659 SEMA3EO15041 775 aa6.56□□□□□ -1.36
PRPF4B-201ENST00000337659 HOXA10P31260 410 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-201ENST00000337659 RAB3GAP1Q15042 981 aa6.56□□□□□ -1.36
PRPF4B-201ENST00000337659 HLFQ16534 295 aa6.56□□□□□ -1.36
PRPF4B-201ENST00000337659 RIC3Q7Z5B4 369 aa6.56□□□□□ -1.36
PRPF4B-201ENST00000337659 NUTM2AQ8IVF1 878 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-201ENST00000337659 CNTROBQ8N137 903 aa6.56□□□□□ -1.36
PRPF4B-201ENST00000337659 PNPLA7Q6ZV29 1317 aa6.55□□□□□ -1.36
PRPF4B-201ENST00000337659 PARP14Q460N5 1801 aa6.55□□□□□ -1.36
PRPF4B-201ENST00000337659 PTGER2P43116 358 aa6.55□□□□□ -1.36
PRPF4B-201ENST00000337659 PRIM1P49642 420 aaKnown RBP6.55□□□□□ -1.36
PRPF4B-201ENST00000337659 KIF6Q6ZMV9 814 aa6.55□□□□□ -1.36
PRPF4B-201ENST00000337659 CCDC171Q6TFL3 1326 aa6.55□□□□□ -1.36
PRPF4B-201ENST00000337659 KBTBD3Q8NAB2 608 aa6.55□□□□□ -1.36
PRPF4B-201ENST00000337659 CWC22Q9HCG8 908 aaKnown RBP6.55□□□□□ -1.36
PRPF4B-201ENST00000337659 KCNQ2O43526 872 aa6.55□□□□□ -1.36
PRPF4B-201ENST00000337659 NOVP48745 357 aa6.55□□□□□ -1.36
PRPF4B-201ENST00000337659 ANP32EQ9BTT0 268 aa6.55□□□□□ -1.36
PRPF4B-201ENST00000337659 EXOC6BQ9Y2D4 811 aa6.55□□□□□ -1.36
PRPF4B-201ENST00000337659 EP400Q96L91 3159 aa6.54□□□□□ -1.36
PRPF4B-201ENST00000337659 SMARCA5O60264 1052 aaPredicted RBP6.54□□□□□ -1.36
PRPF4B-201ENST00000337659 RCAN1P53805 252 aa6.54□□□□□ -1.36
PRPF4B-201ENST00000337659 AKAP2Q9Y2D5 859 aa6.54□□□□□ -1.36
PRPF4B-201ENST00000337659 EIF2S2P20042 333 aaKnown RBP6.54□□□□□ -1.36
PRPF4B-201ENST00000337659 ANAPC4Q9UJX5 808 aa6.54□□□□□ -1.36
PRPF4B-201ENST00000337659 ADAMTSL1Q8N6G6 1762 aa6.54□□□□□ -1.36
PRPF4B-201ENST00000337659 K7ELQ4 463 aaPredicted RBP6.54□□□□□ -1.36
PRPF4B-201ENST00000337659 ANXA1P04083 346 aa6.54□□□□□ -1.36
PRPF4B-201ENST00000337659 ZFYP08048 801 aaPredicted RBP6.54□□□□□ -1.36
PRPF4B-201ENST00000337659 CLASRPQ8N2M8 674 aaKnown RBP6.54□□□□□ -1.36
PRPF4B-201ENST00000337659 GPATCH3Q96I76 525 aa6.54□□□□□ -1.36
PRPF4B-201ENST00000337659 A0A0G2JMZ2 1700 aa6.54□□□□□ -1.36
PRPF4B-201ENST00000337659 VPS53Q5VIR6 699 aa6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 BSDC1Q9NW68 430 aaPredicted RBP6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 MYH2Q9UKX2 1941 aa6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 TAF5LO75529 589 aa6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 SUSD4Q5VX71 490 aa6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 TLR7Q9NYK1 1049 aaKnown RBP6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 C9orf78Q9NZ63 289 aaPredicted RBP6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 FKBP1AP62942 108 aaKnown RBP6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 EXOSC10Q01780 885 aaKnown RBP6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 SF3B2Q13435 895 aaKnown RBP6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 UBE3CQ15386 1083 aa6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 TMC4Q7Z404 712 aa6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 SLC16A10Q8TF71 515 aa6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 SNX14Q9Y5W7 946 aa6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 SBF1O95248 1867 aa6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 SURF6O75683 361 aaKnown RBP6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 CD2BP2O95400 341 aaKnown RBP6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 SLC4A10Q6U841 1118 aa6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 DZIP3Q86Y13 1208 aaKnown RBP6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 NYXQ9GZU5 481 aa6.53□□□□□ -1.36
PRPF4B-201ENST00000337659 PLIN4Q96Q06 1357 aa6.52□□□□□ -1.36
PRPF4B-201ENST00000337659 RGS3P49796 1198 aa6.52□□□□□ -1.37
PRPF4B-201ENST00000337659 TFCP2Q12800 502 aa6.52□□□□□ -1.37
PRPF4B-201ENST00000337659 CASC1Q6TDU7 716 aa6.52□□□□□ -1.37
PRPF4B-201ENST00000337659 CDC5LQ99459 802 aaKnown RBP6.52□□□□□ -1.37
PRPF4B-201ENST00000337659 STRN4Q9NRL3 753 aa6.52□□□□□ -1.37
PRPF4B-201ENST00000337659 PDE8BO95263 885 aa6.52□□□□□ -1.37
PRPF4B-201ENST00000337659 PTMSP20962 102 aa6.52□□□□□ -1.37
PRPF4B-201ENST00000337659 ST3GAL1Q11201 340 aa6.52□□□□□ -1.37
PRPF4B-201ENST00000337659 BECN1Q14457 450 aa6.52□□□□□ -1.37
PRPF4B-201ENST00000337659 LMBR1LQ6UX01 489 aa6.52□□□□□ -1.37
PRPF4B-201ENST00000337659 ADAMTS2O95450 1211 aa6.52□□□□□ -1.37
PRPF4B-201ENST00000337659 UBE3BQ7Z3V4 1068 aa6.52□□□□□ -1.37
PRPF4B-201ENST00000337659 FBXO33Q7Z6M2 555 aa6.52□□□□□ -1.37
PRPF4B-201ENST00000337659 ZNF652Q9Y2D9 606 aa6.52□□□□□ -1.37
PRPF4B-201ENST00000337659 MYH1P12882 1939 aa6.52□□□□□ -1.37
PRPF4B-201ENST00000337659 GIMAP6Q6P9H5 292 aa6.51□□□□□ -1.37
PRPF4B-201ENST00000337659 UTP14AQ9BVJ6 771 aaKnown RBP6.51□□□□□ -1.37
PRPF4B-201ENST00000337659 UPF2Q9HAU5 1272 aaKnown RBP6.51□□□□□ -1.37
PRPF4B-201ENST00000337659 MYH8P13535 1937 aa6.51□□□□□ -1.37
PRPF4B-201ENST00000337659 UBE4AQ14139 1066 aa6.51□□□□□ -1.37
PRPF4B-201ENST00000337659 RUFY2Q8WXA3 655 aa6.51□□□□□ -1.37
PRPF4B-201ENST00000337659 LPIN2Q92539 896 aa6.51□□□□□ -1.37
PRPF4B-201ENST00000337659 MAP4K4O95819 1239 aaPredicted RBP6.51□□□□□ -1.37
PRPF4B-201ENST00000337659 MYL6BP14649 208 aa6.51□□□□□ -1.37
PRPF4B-201ENST00000337659 PROM2Q8N271 834 aa6.51□□□□□ -1.37
PRPF4B-201ENST00000337659 PA2G4Q9UQ80 394 aaKnown RBP6.51□□□□□ -1.37
PRPF4B-201ENST00000337659 PHIPQ8WWQ0 1821 aa6.51□□□□□ -1.37
PRPF4B-201ENST00000337659 G3BP1Q13283 466 aaKnown RBP eCLIP6.51□□□□□ -1.37
PRPF4B-201ENST00000337659 PUM3Q15397 648 aaKnown RBP6.51□□□□□ -1.37
PRPF4B-201ENST00000337659 SMARCC2Q8TAQ2 1214 aa6.51□□□□□ -1.37
PRPF4B-201ENST00000337659 RTFDC1Q9BY42 306 aaPredicted RBP6.51□□□□□ -1.37
PRPF4B-201ENST00000337659 LRRC4BQ9NT99 713 aa6.51□□□□□ -1.37
PRPF4B-201ENST00000337659 SLX4Q8IY92 1834 aa6.5□□□□□ -1.37
PRPF4B-201ENST00000337659 UQCRFS1P1P0C7P4 283 aa6.5□□□□□ -1.37
PRPF4B-201ENST00000337659 AMIGO3Q86WK7 504 aa6.5□□□□□ -1.37
PRPF4B-201ENST00000337659 FAM177A1Q8N128 213 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms