RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 GPSM2P81274 684 aa13.69□□□□□ -0.22
CAPN3-202ENST00000337571 CCDC27Q2M243 656 aa13.69□□□□□ -0.22
CAPN3-202ENST00000337571 ZC3H15Q8WU90 426 aaKnown RBP13.69□□□□□ -0.22
CAPN3-202ENST00000337571 MAP3K2Q9Y2U5 619 aa13.69□□□□□ -0.22
CAPN3-202ENST00000337571 WDR33Q9C0J8 1336 aaKnown RBP13.68□□□□□ -0.22
CAPN3-202ENST00000337571 TRAF5O00463 557 aa13.68□□□□□ -0.22
CAPN3-202ENST00000337571 CTCFP49711 727 aaPredicted RBP13.68□□□□□ -0.22
CAPN3-202ENST00000337571 MAP2K1Q02750 393 aaPredicted RBP13.68□□□□□ -0.22
CAPN3-202ENST00000337571 DOK7Q18PE1 504 aa13.68□□□□□ -0.22
CAPN3-202ENST00000337571 CCDC184Q52MB2 194 aa13.68□□□□□ -0.22
CAPN3-202ENST00000337571 KSR2Q6VAB6 950 aa13.68□□□□□ -0.22
CAPN3-202ENST00000337571 WWC1Q8IX03 1113 aa13.68□□□□□ -0.22
CAPN3-202ENST00000337571 TSPYL6Q8N831 410 aa13.68□□□□□ -0.22
CAPN3-202ENST00000337571 TBC1D16Q8TBP0 767 aa13.68□□□□□ -0.22
CAPN3-202ENST00000337571 JARID2Q92833 1246 aaPredicted RBP13.68□□□□□ -0.22
CAPN3-202ENST00000337571 TSR2Q969E8 191 aaKnown RBP13.68□□□□□ -0.22
CAPN3-202ENST00000337571 DBNDD1Q9H9R9 158 aa13.68□□□□□ -0.22
CAPN3-202ENST00000337571 MRS2Q9HD23 443 aa13.68□□□□□ -0.22
CAPN3-202ENST00000337571 POLLQ9UGP5 575 aa13.68□□□□□ -0.22
CAPN3-202ENST00000337571 TRPM7Q96QT4 1865 aa13.67□□□□□ -0.22
CAPN3-202ENST00000337571 LRRC37AA6NMS7 1700 aa13.67□□□□□ -0.22
CAPN3-202ENST00000337571 PI4KAP2A4QPH2 592 aa13.67□□□□□ -0.22
CAPN3-202ENST00000337571 YDJCA8MPS7 323 aa13.67□□□□□ -0.22
CAPN3-202ENST00000337571 FOXN1O15353 648 aa13.67□□□□□ -0.22
CAPN3-202ENST00000337571 GRM1Q13255 1194 aa13.67□□□□□ -0.22
CAPN3-202ENST00000337571 TWISTNBQ3B726 338 aaPredicted RBP13.67□□□□□ -0.22
CAPN3-202ENST00000337571 CHRDL2Q6WN34 429 aa13.67□□□□□ -0.22
CAPN3-202ENST00000337571 CDC37L1Q7L3B6 337 aa13.67□□□□□ -0.22
CAPN3-202ENST00000337571 ANKRD18AQ8IVF6 992 aa13.67□□□□□ -0.22
CAPN3-202ENST00000337571 PI4KAP1Q8N8J0 262 aa13.67□□□□□ -0.22
CAPN3-202ENST00000337571 DPF2Q92785 391 aa13.67□□□□□ -0.22
CAPN3-202ENST00000337571 CCDC85AQ96PX6 553 aaPredicted RBP13.67□□□□□ -0.22
CAPN3-202ENST00000337571 BEGAINQ9BUH8 593 aa13.67□□□□□ -0.22
CAPN3-202ENST00000337571 SEC31BQ9NQW1 1179 aa13.67□□□□□ -0.22
CAPN3-202ENST00000337571 PGAP2Q9UHJ9 254 aa13.67□□□□□ -0.22
CAPN3-202ENST00000337571 GGA1Q9UJY5 639 aa13.67□□□□□ -0.22
CAPN3-202ENST00000337571 PSMD14O00487 310 aa13.66□□□□□ -0.22
CAPN3-202ENST00000337571 PITPNM1O00562 1244 aa13.66□□□□□ -0.22
CAPN3-202ENST00000337571 ECE2O60344 883 aa13.66□□□□□ -0.22
CAPN3-202ENST00000337571 UFL1O94874 794 aa13.66□□□□□ -0.22
CAPN3-202ENST00000337571 CELF2O95319 508 aaKnown RBP13.66□□□□□ -0.22
CAPN3-202ENST00000337571 RPS12P25398 132 aaKnown RBP13.66□□□□□ -0.22
CAPN3-202ENST00000337571 FMR1Q06787 632 aaKnown RBP eCLIP13.66□□□□□ -0.22
CAPN3-202ENST00000337571 CST9Q5W186 159 aa13.66□□□□□ -0.22
CAPN3-202ENST00000337571 MICALL2Q8IY33 904 aa13.66□□□□□ -0.22
CAPN3-202ENST00000337571 PODXL2Q9NZ53 605 aa13.66□□□□□ -0.22
CAPN3-202ENST00000337571 ZNF316A6NFI3 1004 aaPredicted RBP13.65□□□□□ -0.22
CAPN3-202ENST00000337571 CAPNS2Q96L46 248 aa13.65□□□□□ -0.22
CAPN3-202ENST00000337571 GPR101Q96P66 508 aaPredicted RBP13.65□□□□□ -0.22
CAPN3-202ENST00000337571 CDC5LQ99459 802 aaKnown RBP13.65□□□□□ -0.22
CAPN3-202ENST00000337571 GLIS2Q9BZE0 524 aaPredicted RBP13.65□□□□□ -0.22
CAPN3-202ENST00000337571 ZNF408Q9H9D4 720 aa13.65□□□□□ -0.22
CAPN3-202ENST00000337571 PRDM10Q9NQV6 1147 aa13.65□□□□□ -0.22
CAPN3-202ENST00000337571 WBP1LQ9NX94 342 aa13.65□□□□□ -0.22
CAPN3-202ENST00000337571 SALL2Q9Y467 1007 aaPredicted RBP13.65□□□□□ -0.22
CAPN3-202ENST00000337571 IL16Q14005 1332 aa13.64□□□□□ -0.23
CAPN3-202ENST00000337571 DUOX1Q9NRD9 1551 aa13.64□□□□□ -0.23
CAPN3-202ENST00000337571 HIRAP54198 1017 aaPredicted RBP13.64□□□□□ -0.23
CAPN3-202ENST00000337571 RBM26Q5T8P6 1007 aaKnown RBP13.64□□□□□ -0.23
CAPN3-202ENST00000337571 SAMD7Q7Z3H4 446 aa13.64□□□□□ -0.23
CAPN3-202ENST00000337571 DCPSQ96C86 337 aaKnown RBP13.64□□□□□ -0.23
CAPN3-202ENST00000337571 TLL2Q9Y6L7 1015 aa13.64□□□□□ -0.23
CAPN3-202ENST00000337571 ATP2B4P23634 1241 aa13.63□□□□□ -0.23
CAPN3-202ENST00000337571 LBX1P52954 281 aa13.63□□□□□ -0.23
CAPN3-202ENST00000337571 CTSWP56202 376 aa13.63□□□□□ -0.23
CAPN3-202ENST00000337571 TBC1D10BQ4KMP7 808 aaPredicted RBP13.63□□□□□ -0.23
CAPN3-202ENST00000337571 CYP4F22Q6NT55 531 aa13.63□□□□□ -0.23
CAPN3-202ENST00000337571 USP48Q86UV5 1035 aa13.63□□□□□ -0.23
CAPN3-202ENST00000337571 WDR63Q8IWG1 891 aa13.63□□□□□ -0.23
CAPN3-202ENST00000337571 TRPM4Q8TD43 1214 aa13.63□□□□□ -0.23
CAPN3-202ENST00000337571 KCNQ5Q9NR82 932 aa13.63□□□□□ -0.23
CAPN3-202ENST00000337571 XDHP47989 1333 aa13.63□□□□□ -0.23
CAPN3-202ENST00000337571 SHTN1A0MZ66 631 aa13.62□□□□□ -0.23
CAPN3-202ENST00000337571 IGKV5-2P06315 115 aa13.62□□□□□ -0.23
CAPN3-202ENST00000337571 MAP2K2P36507 400 aa13.62□□□□□ -0.23
CAPN3-202ENST00000337571 FKBP5Q13451 457 aaPredicted RBP13.62□□□□□ -0.23
CAPN3-202ENST00000337571 CWF19L2Q2TBE0 894 aaKnown RBP13.62□□□□□ -0.23
CAPN3-202ENST00000337571 TTLL11Q8NHH1 800 aa13.62□□□□□ -0.23
CAPN3-202ENST00000337571 NEURL1BA8MQ27 555 aa13.61□□□□□ -0.23
CAPN3-202ENST00000337571 VIL1P09327 827 aaKnown RBP13.61□□□□□ -0.23
CAPN3-202ENST00000337571 G2E3Q7L622 706 aa13.61□□□□□ -0.23
CAPN3-202ENST00000337571 UBE3BQ7Z3V4 1068 aa13.61□□□□□ -0.23
CAPN3-202ENST00000337571 KRT26Q7Z3Y9 468 aa13.61□□□□□ -0.23
CAPN3-202ENST00000337571 SAPCD2Q86UD0 394 aa13.61□□□□□ -0.23
CAPN3-202ENST00000337571 HHIPL1Q96JK4 782 aa13.61□□□□□ -0.23
CAPN3-202ENST00000337571 MYH16Q9H6N6 1097 aa13.61□□□□□ -0.23
CAPN3-202ENST00000337571 H7C1W4 665 aa13.6□□□□□ -0.23
CAPN3-202ENST00000337571 IGHMBP2P38935 993 aaKnown RBP13.6□□□□□ -0.23
CAPN3-202ENST00000337571 FLIIQ13045 1269 aa13.6□□□□□ -0.23
CAPN3-202ENST00000337571 PODNQ7Z5L7 613 aa13.6□□□□□ -0.23
CAPN3-202ENST00000337571 C2orf69Q8N8R5 385 aa13.6□□□□□ -0.23
CAPN3-202ENST00000337571 AGBL3Q8NEM8 1001 aa13.6□□□□□ -0.23
CAPN3-202ENST00000337571 GREM2Q9H772 168 aa13.6□□□□□ -0.23
CAPN3-202ENST00000337571 BSDC1Q9NW68 430 aaPredicted RBP13.6□□□□□ -0.23
CAPN3-202ENST00000337571 MYH3P11055 1940 aa13.6□□□□□ -0.23
CAPN3-202ENST00000337571 CACNA1FO60840 1977 aa13.6□□□□□ -0.23
CAPN3-202ENST00000337571 USP17L3A6NCW0 530 aa13.59□□□□□ -0.23
CAPN3-202ENST00000337571 USP17L4A6NCW7 530 aa13.59□□□□□ -0.23
CAPN3-202ENST00000337571 GCKRQ14397 625 aa13.59□□□□□ -0.23
CAPN3-202ENST00000337571 KIF4BQ2VIQ3 1234 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms