RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ZNF771Q7L3S4 317 aaPredicted RBP9.64□□□□□ -0.87
HPS4-201ENST00000336873 MIGA1Q8NAN2 632 aa9.64□□□□□ -0.87
HPS4-201ENST00000336873 INTS4Q96HW7 963 aaKnown RBP9.64□□□□□ -0.87
HPS4-201ENST00000336873 PAG1Q9NWQ8 432 aa9.64□□□□□ -0.87
HPS4-201ENST00000336873 CWC25Q9NXE8 425 aaPredicted RBP9.64□□□□□ -0.87
HPS4-201ENST00000336873 TMOD3Q9NYL9 352 aa9.64□□□□□ -0.87
HPS4-201ENST00000336873 FPGT-TNNI3KV9GXZ4 949 aa9.64□□□□□ -0.87
HPS4-201ENST00000336873 NEURL1BA8MQ27 555 aa9.64□□□□□ -0.87
HPS4-201ENST00000336873 TAF5LO75529 589 aa9.64□□□□□ -0.87
HPS4-201ENST00000336873 TNNT1P13805 278 aa9.64□□□□□ -0.87
HPS4-201ENST00000336873 TDO2P48775 406 aa9.64□□□□□ -0.87
HPS4-201ENST00000336873 LRP2BPQ9P2M1 347 aa9.64□□□□□ -0.87
HPS4-201ENST00000336873 NOL7Q9UMY1 257 aaKnown RBP9.64□□□□□ -0.87
HPS4-201ENST00000336873 MYO5BQ9ULV0 1848 aa9.63□□□□□ -0.87
HPS4-201ENST00000336873 DLG5Q8TDM6 1919 aa9.63□□□□□ -0.87
HPS4-201ENST00000336873 A0A0G2JLW4 131 aa9.63□□□□□ -0.87
HPS4-201ENST00000336873 PTPDC1A2A3K4 754 aa9.63□□□□□ -0.87
HPS4-201ENST00000336873 ZNF213O14771 459 aa9.63□□□□□ -0.87
HPS4-201ENST00000336873 IMMTQ16891 758 aaKnown RBP9.63□□□□□ -0.87
HPS4-201ENST00000336873 SLC9C2Q5TAH2 1124 aa9.63□□□□□ -0.87
HPS4-201ENST00000336873 CADPS2Q86UW7 1296 aa9.63□□□□□ -0.87
HPS4-201ENST00000336873 AIDAQ96BJ3 306 aa9.63□□□□□ -0.87
HPS4-201ENST00000336873 ZSWIM4Q9H7M6 989 aa9.63□□□□□ -0.87
HPS4-201ENST00000336873 CFAP45Q9UL16 551 aa9.63□□□□□ -0.87
HPS4-201ENST00000336873 U3KPZ7 1027 aaPredicted RBP9.63□□□□□ -0.87
HPS4-201ENST00000336873 AATKQ6ZMQ8 1374 aa9.63□□□□□ -0.87
HPS4-201ENST00000336873 DHX16O60231 1041 aaKnown RBP9.63□□□□□ -0.87
HPS4-201ENST00000336873 ARHGEF40Q8TER5 1519 aa9.63□□□□□ -0.87
HPS4-201ENST00000336873 LETM1O95202 739 aaPredicted RBP9.63□□□□□ -0.87
HPS4-201ENST00000336873 TPM4P67936 248 aa9.63□□□□□ -0.87
HPS4-201ENST00000336873 PIP4K2BP78356 416 aa9.63□□□□□ -0.87
HPS4-201ENST00000336873 CFAP100Q494V2 611 aa9.63□□□□□ -0.87
HPS4-201ENST00000336873 PPP4R3BQ5MIZ7 849 aa9.63□□□□□ -0.87
HPS4-201ENST00000336873 PLCD3Q8N3E9 789 aa9.63□□□□□ -0.87
HPS4-201ENST00000336873 PHKBQ93100 1093 aa9.63□□□□□ -0.87
HPS4-201ENST00000336873 FRMPD1Q5SYB0 1578 aa9.62□□□□□ -0.87
HPS4-201ENST00000336873 MED14O60244 1454 aa9.62□□□□□ -0.87
HPS4-201ENST00000336873 CD163L1Q9NR16 1453 aa9.62□□□□□ -0.87
HPS4-201ENST00000336873 ALDH1L1O75891 902 aa9.62□□□□□ -0.87
HPS4-201ENST00000336873 IGKV5-2P06315 115 aa9.62□□□□□ -0.87
HPS4-201ENST00000336873 AOPEPQ8N6M6 819 aa9.62□□□□□ -0.87
HPS4-201ENST00000336873 OSBPL3Q9H4L5 887 aa9.62□□□□□ -0.87
HPS4-201ENST00000336873 C19orf44Q9H6X5 657 aa9.62□□□□□ -0.87
HPS4-201ENST00000336873 TRERF1Q96PN7 1200 aa9.62□□□□□ -0.87
HPS4-201ENST00000336873 RAI14Q9P0K7 980 aa9.62□□□□□ -0.87
HPS4-201ENST00000336873 CYP21A2P08686 494 aa9.62□□□□□ -0.87
HPS4-201ENST00000336873 RPS6KB1P23443 525 aa9.62□□□□□ -0.87
HPS4-201ENST00000336873 KRT32Q14532 448 aa9.62□□□□□ -0.87
HPS4-201ENST00000336873 DHX8Q14562 1220 aaKnown RBP9.62□□□□□ -0.87
HPS4-201ENST00000336873 CCDC112Q8NEF3 446 aa9.62□□□□□ -0.87
HPS4-201ENST00000336873 ZCRB1Q8TBF4 217 aaKnown RBP9.62□□□□□ -0.87
HPS4-201ENST00000336873 INCENPQ9NQS7 918 aa9.62□□□□□ -0.87
HPS4-201ENST00000336873 TTC41PQ6P2S7 1318 aa9.61□□□□□ -0.87
HPS4-201ENST00000336873 ATP10DQ9P241 1426 aa9.61□□□□□ -0.87
HPS4-201ENST00000336873 ERICH2A1L162 156 aa9.61□□□□□ -0.87
HPS4-201ENST00000336873 SLC52A2Q9HAB3 445 aa9.61□□□□□ -0.87
HPS4-201ENST00000336873 PYCARDQ9ULZ3 195 aa9.61□□□□□ -0.87
HPS4-201ENST00000336873 ADORA1P30542 326 aa9.61□□□□□ -0.87
HPS4-201ENST00000336873 GPIHBP1Q8IV16 184 aa9.61□□□□□ -0.87
HPS4-201ENST00000336873 METTL22Q9BUU2 404 aaPredicted RBP9.61□□□□□ -0.87
HPS4-201ENST00000336873 DNAJC5Q9H3Z4 198 aa9.61□□□□□ -0.87
HPS4-201ENST00000336873 ANKRD26Q9UPS8 1709 aa9.61□□□□□ -0.87
HPS4-201ENST00000336873 NPHP3Q7Z494 1330 aa9.61□□□□□ -0.87
HPS4-201ENST00000336873 ERICH4A6NGS2 130 aa9.61□□□□□ -0.87
HPS4-201ENST00000336873 PRDM1O75626 825 aa9.61□□□□□ -0.87
HPS4-201ENST00000336873 ARID5BQ14865 1188 aa9.61□□□□□ -0.87
HPS4-201ENST00000336873 TMC6Q7Z403 805 aa9.61□□□□□ -0.87
HPS4-201ENST00000336873 DNAJC10Q8IXB1 793 aa9.61□□□□□ -0.87
HPS4-201ENST00000336873 PDCL2Q8N4E4 241 aa9.61□□□□□ -0.87
HPS4-201ENST00000336873 FAM200AQ8TCP9 573 aa9.61□□□□□ -0.87
HPS4-201ENST00000336873 LEO1Q8WVC0 666 aaPredicted RBP9.61□□□□□ -0.87
HPS4-201ENST00000336873 ZNF396Q96N95 335 aaPredicted RBP9.61□□□□□ -0.87
HPS4-201ENST00000336873 NEXMIFQ5QGS0 1516 aa9.6□□□□□ -0.87
HPS4-201ENST00000336873 SLC26A6Q9BXS9 759 aa9.6□□□□□ -0.87
HPS4-201ENST00000336873 CBX8Q9HC52 389 aa9.6□□□□□ -0.87
HPS4-201ENST00000336873 MAP2P11137 1827 aaKnown RBP9.6□□□□□ -0.87
HPS4-201ENST00000336873 B4E1Z4 1266 aa9.6□□□□□ -0.87
HPS4-201ENST00000336873 IFIT3O14879 490 aaKnown RBP9.6□□□□□ -0.87
HPS4-201ENST00000336873 RANBP6O60518 1105 aaKnown RBP9.6□□□□□ -0.87
HPS4-201ENST00000336873 ZAP70P43403 619 aa9.6□□□□□ -0.87
HPS4-201ENST00000336873 CEP57L1Q8IYX8 460 aa9.6□□□□□ -0.87
HPS4-201ENST00000336873 AIFM3Q96NN9 605 aa9.6□□□□□ -0.87
HPS4-201ENST00000336873 NAPBQ9H115 298 aa9.6□□□□□ -0.87
HPS4-201ENST00000336873 STAP2Q9UGK3 403 aa9.6□□□□□ -0.87
HPS4-201ENST00000336873 CCDC69A6NI79 296 aa9.6□□□□□ -0.87
HPS4-201ENST00000336873 PRC1O43663 620 aa9.6□□□□□ -0.87
HPS4-201ENST00000336873 NAA30Q147X3 362 aaPredicted RBP9.6□□□□□ -0.87
HPS4-201ENST00000336873 SAFBQ15424 915 aaKnown RBP eCLIP9.6□□□□□ -0.87
HPS4-201ENST00000336873 SMIM5Q71RC9 77 aa9.6□□□□□ -0.87
HPS4-201ENST00000336873 PPP1R9BQ96SB3 815 aa9.6□□□□□ -0.87
HPS4-201ENST00000336873 AGLP35573 1532 aa9.59□□□□□ -0.87
HPS4-201ENST00000336873 ADD1P35611 737 aaKnown RBP9.59□□□□□ -0.87
HPS4-201ENST00000336873 ARHGEF25Q86VW2 580 aa9.59□□□□□ -0.87
HPS4-201ENST00000336873 STAMQ92783 540 aa9.59□□□□□ -0.87
HPS4-201ENST00000336873 USP28Q96RU2 1077 aa9.59□□□□□ -0.87
HPS4-201ENST00000336873 SETBP1Q9Y6X0 1596 aa9.59□□□□□ -0.87
HPS4-201ENST00000336873 ATP7BP35670 1465 aa9.59□□□□□ -0.87
HPS4-201ENST00000336873 ARHGEF10O15013 1369 aa9.59□□□□□ -0.87
HPS4-201ENST00000336873 SKILP12757 684 aa9.59□□□□□ -0.87
HPS4-201ENST00000336873 CUL4AQ13619 759 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms