RNA–Protein interactions for RNA: ENST00000336356.3

LRAT-201, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 4,928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-201ENST00000336356 SLC52A2Q9HAB3 445 aa12.81□□□□□ -0.36
LRAT-201ENST00000336356 STK38Q15208 465 aa12.8□□□□□ -0.36
LRAT-201ENST00000336356 JAKMIP3Q5VZ66 844 aa12.8□□□□□ -0.36
LRAT-201ENST00000336356 TSC1Q92574 1164 aa12.8□□□□□ -0.36
LRAT-201ENST00000336356 KAT6BQ8WYB5 2073 aa12.8□□□□□ -0.36
LRAT-201ENST00000336356 LOC102724428A0A0B4J2F2 783 aa12.8□□□□□ -0.36
LRAT-201ENST00000336356 GOLGA6L9A6NEM1 432 aa12.8□□□□□ -0.36
LRAT-201ENST00000336356 C6orf229H3BNL8 230 aa12.8□□□□□ -0.36
LRAT-201ENST00000336356 IFIT1P09914 478 aaKnown RBP12.8□□□□□ -0.36
LRAT-201ENST00000336356 SIK1P57059 783 aa12.8□□□□□ -0.36
LRAT-201ENST00000336356 OGFOD1Q8N543 542 aa12.8□□□□□ -0.36
LRAT-201ENST00000336356 GPATCH11Q8N954 259 aa12.8□□□□□ -0.36
LRAT-201ENST00000336356 ARFGAP3Q9NP61 516 aa12.8□□□□□ -0.36
LRAT-201ENST00000336356 LRRIQ1Q96JM4 1722 aa12.8□□□□□ -0.36
LRAT-201ENST00000336356 TRIM29Q14134 588 aa12.8□□□□□ -0.36
LRAT-201ENST00000336356 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.8□□□□□ -0.36
LRAT-201ENST00000336356 FAM177A1Q8N128 213 aaPredicted RBP12.8□□□□□ -0.36
LRAT-201ENST00000336356 SMARCE1Q969G3 411 aa12.8□□□□□ -0.36
LRAT-201ENST00000336356 CPDO75976 1380 aa12.8□□□□□ -0.36
LRAT-201ENST00000336356 FERMT3Q86UX7 667 aa12.8□□□□□ -0.36
LRAT-201ENST00000336356 CWC25Q9NXE8 425 aaPredicted RBP12.8□□□□□ -0.36
LRAT-201ENST00000336356 CNPY2Q9Y2B0 182 aa12.8□□□□□ -0.36
LRAT-201ENST00000336356 SLC4A2P04920 1241 aa12.79□□□□□ -0.36
LRAT-201ENST00000336356 PHKG2P15735 406 aa12.79□□□□□ -0.36
LRAT-201ENST00000336356 CASTP20810 708 aaKnown RBP12.79□□□□□ -0.36
LRAT-201ENST00000336356 STX1AQ16623 288 aa12.79□□□□□ -0.36
LRAT-201ENST00000336356 ANKRD18BA2A2Z9 1011 aa12.79□□□□□ -0.36
LRAT-201ENST00000336356 CCDC191Q8NCU4 936 aa12.79□□□□□ -0.36
LRAT-201ENST00000336356 AKAP2Q9Y2D5 859 aa12.79□□□□□ -0.36
LRAT-201ENST00000336356 CEBPZQ03701 1054 aaKnown RBP12.79□□□□□ -0.36
LRAT-201ENST00000336356 HOOK2Q96ED9 719 aa12.79□□□□□ -0.36
LRAT-201ENST00000336356 TMEM131LA2VDJ0 1609 aa12.79□□□□□ -0.36
LRAT-201ENST00000336356 SMARCA5O60264 1052 aaPredicted RBP12.79□□□□□ -0.36
LRAT-201ENST00000336356 CCDC158Q5M9N0 1113 aa12.79□□□□□ -0.36
LRAT-201ENST00000336356 TXNRD1Q16881 649 aa12.78□□□□□ -0.36
LRAT-201ENST00000336356 CEP126Q9P2H0 1117 aa12.78□□□□□ -0.36
LRAT-201ENST00000336356 ZNF521Q96K83 1311 aa12.78□□□□□ -0.36
LRAT-201ENST00000336356 RBM5P52756 815 aaKnown RBP eCLIP12.78□□□□□ -0.36
LRAT-201ENST00000336356 EN1Q05925 392 aaPredicted RBP12.78□□□□□ -0.36
LRAT-201ENST00000336356 JMYQ8N9B5 988 aa12.78□□□□□ -0.36
LRAT-201ENST00000336356 DDX11Q96FC9 970 aa12.78□□□□□ -0.36
LRAT-201ENST00000336356 PDLIM2Q96JY6 352 aa12.78□□□□□ -0.36
LRAT-201ENST00000336356 CPSF1Q10570 1443 aaKnown RBP12.78□□□□□ -0.36
LRAT-201ENST00000336356 SSH2Q76I76 1423 aa12.78□□□□□ -0.36
LRAT-201ENST00000336356 PES1O00541 588 aaKnown RBP12.78□□□□□ -0.36
LRAT-201ENST00000336356 CASQ1P31415 396 aa12.78□□□□□ -0.36
LRAT-201ENST00000336356 IFIT5Q13325 482 aaKnown RBP12.78□□□□□ -0.36
LRAT-201ENST00000336356 FILIP1LQ4L180 1135 aa12.78□□□□□ -0.36
LRAT-201ENST00000336356 NCBP3Q53F19 620 aaKnown RBP12.78□□□□□ -0.36
LRAT-201ENST00000336356 SLC3A2P08195 630 aaKnown RBP12.78□□□□□ -0.36
LRAT-201ENST00000336356 DCTN1Q14203 1278 aa12.78□□□□□ -0.36
LRAT-201ENST00000336356 F13A1P00488 732 aa12.77□□□□□ -0.36
LRAT-201ENST00000336356 TYRO3Q06418 890 aa12.77□□□□□ -0.36
LRAT-201ENST00000336356 SYCP1Q15431 976 aa12.77□□□□□ -0.36
LRAT-201ENST00000336356 ANO6Q4KMQ2 910 aa12.77□□□□□ -0.36
LRAT-201ENST00000336356 MCM10Q7L590 875 aa12.77□□□□□ -0.36
LRAT-201ENST00000336356 C17orf53Q8N3J3 647 aaPredicted RBP12.77□□□□□ -0.36
LRAT-201ENST00000336356 LRRFIP2Q9Y608 721 aaKnown RBP12.77□□□□□ -0.36
LRAT-201ENST00000336356 SHTN1A0MZ66 631 aa12.77□□□□□ -0.37
LRAT-201ENST00000336356 TTC31Q49AM3 519 aaPredicted RBP12.77□□□□□ -0.37
LRAT-201ENST00000336356 ANKRD2Q9GZV1 360 aa12.77□□□□□ -0.37
LRAT-201ENST00000336356 MAP9Q49MG5 647 aa12.77□□□□□ -0.37
LRAT-201ENST00000336356 CAGE1Q8TC20 777 aa12.77□□□□□ -0.37
LRAT-201ENST00000336356 DNAAF4Q8WXU2 420 aa12.77□□□□□ -0.37
LRAT-201ENST00000336356 BCS1LQ9Y276 419 aa12.77□□□□□ -0.37
LRAT-201ENST00000336356 KDM5AP29375 1690 aaKnown RBP12.77□□□□□ -0.37
LRAT-201ENST00000336356 MCM3P25205 808 aa12.77□□□□□ -0.37
LRAT-201ENST00000336356 C10orf67Q8IYJ2 551 aa12.77□□□□□ -0.37
LRAT-201ENST00000336356 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.77□□□□□ -0.37
LRAT-201ENST00000336356 GJB2P29033 226 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 TTLL12Q14166 644 aaPredicted RBP12.76□□□□□ -0.37
LRAT-201ENST00000336356 KRT32Q14532 448 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 FSD1Q9BTV5 496 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 ZC3H12CQ9C0D7 883 aaKnown RBP12.76□□□□□ -0.37
LRAT-201ENST00000336356 DACH1Q9UI36 760 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 A0A1B0GUL7 405 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 LDHCP07864 332 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 FOSBP53539 338 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 ZNF790Q6PG37 636 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 ANKRD13DQ6ZTN6 518 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 ANKRD18AQ8IVF6 992 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 SKIDA1Q1XH10 827 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 ZSCAN25Q6NSZ9 544 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 PPFIBP1Q86W92 1011 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 DCTPP1Q9H773 170 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 EXOC6BQ9Y2D4 811 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 PTPRUQ92729 1446 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 KIF1AQ12756 1690 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 CFAP100Q494V2 611 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 ARHGAP29Q52LW3 1261 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 PLEKHM2Q8IWE5 1019 aa12.76□□□□□ -0.37
LRAT-201ENST00000336356 TRPM1Q7Z4N2 1603 aa12.75□□□□□ -0.37
LRAT-201ENST00000336356 DHX16O60231 1041 aaKnown RBP12.75□□□□□ -0.37
LRAT-201ENST00000336356 TTLL5Q6EMB2 1281 aa12.75□□□□□ -0.37
LRAT-201ENST00000336356 ARHGAP27Q6ZUM4 889 aa12.75□□□□□ -0.37
LRAT-201ENST00000336356 ANKRD44Q8N8A2 993 aa12.75□□□□□ -0.37
LRAT-201ENST00000336356 ESYT1Q9BSJ8 1104 aa12.75□□□□□ -0.37
LRAT-201ENST00000336356 CRACR2AQ9BSW2 395 aa12.75□□□□□ -0.37
LRAT-201ENST00000336356 SOCS7O14512 581 aa12.75□□□□□ -0.37
LRAT-201ENST00000336356 BRD1O95696 1058 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms