RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 C2CD5Q86YS7 1000 aa26.57■■□□□ 1.84
TPM1-204ENST00000334895 MPHOSPH8Q99549 860 aa26.57■■□□□ 1.84
TPM1-204ENST00000334895 NPR1P16066 1061 aa26.56■■□□□ 1.84
TPM1-204ENST00000334895 CRAMP1Q96RY5 1269 aa26.56■■□□□ 1.84
TPM1-204ENST00000334895 BSDC1Q9NW68 430 aaPredicted RBP26.56■■□□□ 1.84
TPM1-204ENST00000334895 DLEC1Q9Y238 1755 aa26.56■■□□□ 1.84
TPM1-204ENST00000334895 CHRNA5P30532 468 aa26.55■■□□□ 1.84
TPM1-204ENST00000334895 SLC51AQ86UW1 340 aa26.55■■□□□ 1.84
TPM1-204ENST00000334895 C16orf71Q8IYS4 520 aaPredicted RBP26.55■■□□□ 1.84
TPM1-204ENST00000334895 NLGN2Q8NFZ4 835 aa26.55■■□□□ 1.84
TPM1-204ENST00000334895 BRCA1P38398 1863 aaKnown RBP26.55■■□□□ 1.84
TPM1-204ENST00000334895 VGLL2Q8N8G2 317 aa26.54■■□□□ 1.84
TPM1-204ENST00000334895 BCL11AQ9H165 835 aa26.54■■□□□ 1.84
TPM1-204ENST00000334895 CD2APQ9Y5K6 639 aa26.54■■□□□ 1.84
TPM1-204ENST00000334895 OTUD7AQ8TE49 926 aaPredicted RBP26.54■■□□□ 1.84
TPM1-204ENST00000334895 MASTLQ96GX5 879 aa26.54■■□□□ 1.84
TPM1-204ENST00000334895 H0YIN7 160 aa26.53■■□□□ 1.84
TPM1-204ENST00000334895 METTL24Q5JXM2 366 aa26.52■■□□□ 1.84
TPM1-204ENST00000334895 EAF2Q96CJ1 260 aaPredicted RBP26.52■■□□□ 1.84
TPM1-204ENST00000334895 CACNA1SQ13698 1873 aa26.52■■□□□ 1.84
TPM1-204ENST00000334895 MROH5Q6ZUA9 1318 aa26.52■■□□□ 1.84
TPM1-204ENST00000334895 STYK1Q6J9G0 422 aa26.51■■□□□ 1.83
TPM1-204ENST00000334895 CEP126Q9P2H0 1117 aa26.51■■□□□ 1.83
TPM1-204ENST00000334895 ZBTB47Q9UFB7 747 aaPredicted RBP26.51■■□□□ 1.83
TPM1-204ENST00000334895 MINPP1Q9UNW1 487 aa26.51■■□□□ 1.83
TPM1-204ENST00000334895 GOLGB1Q14789 3259 aaKnown RBP26.51■■□□□ 1.83
TPM1-204ENST00000334895 CHRNDQ07001 517 aa26.5■■□□□ 1.83
TPM1-204ENST00000334895 TNNI3KQ59H18 835 aa26.5■■□□□ 1.83
TPM1-204ENST00000334895 HELBQ8NG08 1087 aaPredicted RBP26.5■■□□□ 1.83
TPM1-204ENST00000334895 FPGT-TNNI3KV9GXZ4 949 aa26.5■■□□□ 1.83
TPM1-204ENST00000334895 LRRC37AA6NMS7 1700 aa26.5■■□□□ 1.83
TPM1-204ENST00000334895 ZNF609O15014 1411 aa26.5■■□□□ 1.83
TPM1-204ENST00000334895 SALL3Q9BXA9 1300 aa26.5■■□□□ 1.83
TPM1-204ENST00000334895 CLASRPQ8N2M8 674 aaKnown RBP26.5■■□□□ 1.83
TPM1-204ENST00000334895 BBOX1O75936 387 aa26.49■■□□□ 1.83
TPM1-204ENST00000334895 ZNF622Q969S3 477 aaKnown RBP eCLIP26.49■■□□□ 1.836e-7■■□□□ 13.8
TPM1-204ENST00000334895 GPR108Q9NPR9 543 aa26.49■■□□□ 1.83
TPM1-204ENST00000334895 SLX4Q8IY92 1834 aa26.48■■□□□ 1.83
TPM1-204ENST00000334895 TAF5LO75529 589 aa26.48■■□□□ 1.83
TPM1-204ENST00000334895 PDE8BO95263 885 aa26.48■■□□□ 1.83
TPM1-204ENST00000334895 DPEP1P16444 411 aa26.48■■□□□ 1.83
TPM1-204ENST00000334895 KCNA3P22001 575 aa26.48■■□□□ 1.83
TPM1-204ENST00000334895 ALDH1B1P30837 517 aa26.48■■□□□ 1.83
TPM1-204ENST00000334895 RGS3P49796 1198 aa26.48■■□□□ 1.83
TPM1-204ENST00000334895 AACSQ86V21 672 aa26.48■■□□□ 1.83
TPM1-204ENST00000334895 TLR7Q9NYK1 1049 aaKnown RBP26.47■■□□□ 1.83
TPM1-204ENST00000334895 A0A0G2JLW4 131 aa26.47■■□□□ 1.83
TPM1-204ENST00000334895 PPEF1O14829 653 aaPredicted RBP26.47■■□□□ 1.83
TPM1-204ENST00000334895 PLEKHM2Q8IWE5 1019 aa26.47■■□□□ 1.83
TPM1-204ENST00000334895 CCDC8Q9H0W5 538 aaPredicted RBP26.47■■□□□ 1.83
TPM1-204ENST00000334895 SNAP23O00161 211 aa26.46■■□□□ 1.83
TPM1-204ENST00000334895 TGFB2P61812 414 aa26.46■■□□□ 1.83
TPM1-204ENST00000334895 A0A1B0GUL7 405 aa26.45■■□□□ 1.82
TPM1-204ENST00000334895 FGFR2P21802 821 aa26.45■■□□□ 1.82
TPM1-204ENST00000334895 TIMM10P62072 90 aa26.45■■□□□ 1.82
TPM1-204ENST00000334895 DBNLQ9UJU6 430 aaKnown RBP26.45■■□□□ 1.82
TPM1-204ENST00000334895 LTBP1Q14766 1721 aa26.45■■□□□ 1.82
TPM1-204ENST00000334895 WTIPA6NIX2 430 aaPredicted RBP26.44■■□□□ 1.82
TPM1-204ENST00000334895 PRPF40BQ6NWY9 871 aaKnown RBP26.44■■□□□ 1.82
TPM1-204ENST00000334895 CNKSR1Q969H4 720 aa26.44■■□□□ 1.82
TPM1-204ENST00000334895 WWC3Q9ULE0 1092 aa26.44■■□□□ 1.82
TPM1-204ENST00000334895 ARAP2Q8WZ64 1704 aa26.44■■□□□ 1.82
TPM1-204ENST00000334895 ATP2B3Q16720 1220 aa26.43■■□□□ 1.82
TPM1-204ENST00000334895 TMC4Q7Z404 712 aa26.43■■□□□ 1.82
TPM1-204ENST00000334895 AKAP2Q9Y2D5 859 aa26.43■■□□□ 1.82
TPM1-204ENST00000334895 ATP6V0A2Q9Y487 856 aa26.43■■□□□ 1.82
TPM1-204ENST00000334895 IFIT2P09913 472 aaKnown RBP26.43■■□□□ 1.82
TPM1-204ENST00000334895 MX1P20591 662 aa26.43■■□□□ 1.82
TPM1-204ENST00000334895 PUM3Q15397 648 aaKnown RBP26.43■■□□□ 1.82
TPM1-204ENST00000334895 OLFM4Q6UX06 510 aa26.43■■□□□ 1.82
TPM1-204ENST00000334895 SP8Q8IXZ3 490 aa26.43■■□□□ 1.82
TPM1-204ENST00000334895 DBNDD2Q9BQY9 259 aa26.43■■□□□ 1.82
TPM1-204ENST00000334895 PDE1AP54750 535 aa26.42■■□□□ 1.82
TPM1-204ENST00000334895 TSHZ3Q63HK5 1081 aa26.42■■□□□ 1.82
TPM1-204ENST00000334895 ANKRD2Q9GZV1 360 aa26.42■■□□□ 1.82
TPM1-204ENST00000334895 ADORA1P30542 326 aa26.41■■□□□ 1.82
TPM1-204ENST00000334895 GPSM2P81274 684 aa26.41■■□□□ 1.82
TPM1-204ENST00000334895 NEUROD6Q96NK8 337 aa26.41■■□□□ 1.82
TPM1-204ENST00000334895 STAP2Q9UGK3 403 aa26.41■■□□□ 1.82
TPM1-204ENST00000334895 C7orf43Q8WVR3 580 aa26.4■■□□□ 1.82
TPM1-204ENST00000334895 ARFGEF1Q9Y6D6 1849 aa26.4■■□□□ 1.82
TPM1-204ENST00000334895 UTRNP46939 3433 aa26.4■■□□□ 1.82
TPM1-204ENST00000334895 LPIN2Q92539 896 aa26.39■■□□□ 1.82
TPM1-204ENST00000334895 OSBPL3Q9H4L5 887 aa26.39■■□□□ 1.82
TPM1-204ENST00000334895 XDHP47989 1333 aa26.39■■□□□ 1.81
TPM1-204ENST00000334895 TTLL6Q8N841 843 aa26.39■■□□□ 1.81
TPM1-204ENST00000334895 XAGE2Q96GT9 111 aa26.39■■□□□ 1.81
TPM1-204ENST00000334895 UBE4AQ14139 1066 aa26.38■■□□□ 1.81
TPM1-204ENST00000334895 DUOX1Q9NRD9 1551 aa26.38■■□□□ 1.81
TPM1-204ENST00000334895 PODXL2Q9NZ53 605 aa26.37■■□□□ 1.81
TPM1-204ENST00000334895 ANKIB1Q9P2G1 1089 aa26.37■■□□□ 1.81
TPM1-204ENST00000334895 SNED1Q8TER0 1413 aa26.37■■□□□ 1.81
TPM1-204ENST00000334895 PELP1Q8IZL8 1130 aaKnown RBP26.36■■□□□ 1.81
TPM1-204ENST00000334895 PI4K2BQ8TCG2 481 aa26.36■■□□□ 1.81
TPM1-204ENST00000334895 ECHDC1Q9NTX5 307 aa26.36■■□□□ 1.81
TPM1-204ENST00000334895 NSFL1CQ9UNZ2 370 aaKnown RBP26.36■■□□□ 1.81
TPM1-204ENST00000334895 ZNF804BA4D1E1 1349 aa26.36■■□□□ 1.81
TPM1-204ENST00000334895 TTC41PQ6P2S7 1318 aa26.36■■□□□ 1.81
TPM1-204ENST00000334895 IRS2Q9Y4H2 1338 aa26.36■■□□□ 1.81
TPM1-204ENST00000334895 SLC5A1P13866 664 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms