RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 IL15P40933 162 aaPredicted RBP27.69■■■□□ 2.02
NDEL1-201ENST00000334527 GPR108Q9NPR9 543 aa27.69■■■□□ 2.02
NDEL1-201ENST00000334527 WDR17Q8IZU2 1322 aa27.69■■■□□ 2.02
NDEL1-201ENST00000334527 ERVV-2B6SEH9 535 aa27.68■■■□□ 2.02
NDEL1-201ENST00000334527 SLFNL1Q499Z3 407 aa27.68■■■□□ 2.02
NDEL1-201ENST00000334527 LRRC2Q9BYS8 371 aa27.68■■■□□ 2.02
NDEL1-201ENST00000334527 NUP62CLQ9H1M0 184 aa27.68■■■□□ 2.02
NDEL1-201ENST00000334527 STOX1Q6ZVD7 989 aa27.67■■■□□ 2.02
NDEL1-201ENST00000334527 BRF1Q92994 677 aa27.67■■■□□ 2.02
NDEL1-201ENST00000334527 PRDM11Q9NQV5 511 aa27.67■■■□□ 2.02
NDEL1-201ENST00000334527 GOLGA6L4A6NEF3 574 aa27.67■■■□□ 2.02
NDEL1-201ENST00000334527 FGD1P98174 961 aa27.67■■■□□ 2.02
NDEL1-201ENST00000334527 PLCB2Q00722 1185 aa27.67■■■□□ 2.02
NDEL1-201ENST00000334527 HELLSQ9NRZ9 838 aa27.67■■■□□ 2.02
NDEL1-201ENST00000334527 KCPQ6ZWJ8 1503 aa27.67■■■□□ 2.02
NDEL1-201ENST00000334527 HSP90AA2PQ14568 343 aaPredicted RBP27.66■■■□□ 2.02
NDEL1-201ENST00000334527 MAP3K11Q16584 847 aa27.66■■■□□ 2.02
NDEL1-201ENST00000334527 LRRC24Q50LG9 513 aa27.66■■■□□ 2.02
NDEL1-201ENST00000334527 CCDC191Q8NCU4 936 aa27.66■■■□□ 2.02
NDEL1-201ENST00000334527 LEO1Q8WVC0 666 aaPredicted RBP27.66■■■□□ 2.02
NDEL1-201ENST00000334527 ZNF594Q96JF6 807 aaPredicted RBP27.66■■■□□ 2.02
NDEL1-201ENST00000334527 ZNF830Q96NB3 372 aaPredicted RBP27.66■■■□□ 2.02
NDEL1-201ENST00000334527 RRP9O43818 475 aaKnown RBP27.66■■■□□ 2.02
NDEL1-201ENST00000334527 CAMK4Q16566 473 aa27.66■■■□□ 2.02
NDEL1-201ENST00000334527 EYA2O00167 538 aa27.65■■■□□ 2.02
NDEL1-201ENST00000334527 HMGB1P09429 215 aaKnown RBP27.65■■■□□ 2.02
NDEL1-201ENST00000334527 DDX11Q96FC9 970 aa27.65■■■□□ 2.02
NDEL1-201ENST00000334527 LAMA4Q16363 1823 aa27.65■■■□□ 2.02
NDEL1-201ENST00000334527 SCRN1Q12765 414 aa27.64■■■□□ 2.02
NDEL1-201ENST00000334527 H3BQV1 296 aa27.64■■■□□ 2.01
NDEL1-201ENST00000334527 IFFO2Q5TF58 517 aa27.64■■■□□ 2.01
NDEL1-201ENST00000334527 DSCC1Q9BVC3 393 aa27.64■■■□□ 2.01
NDEL1-201ENST00000334527 DACT1Q9NYF0 836 aa27.64■■■□□ 2.01
NDEL1-201ENST00000334527 RESTQ13127 1097 aa27.63■■■□□ 2.01
NDEL1-201ENST00000334527 ZMYM1Q5SVZ6 1142 aa27.63■■■□□ 2.01
NDEL1-201ENST00000334527 DHX32Q7L7V1 743 aaKnown RBP27.63■■■□□ 2.01
NDEL1-201ENST00000334527 AP5Z1O43299 807 aa27.63■■■□□ 2.01
NDEL1-201ENST00000334527 IFIT1P09914 478 aaKnown RBP27.63■■■□□ 2.01
NDEL1-201ENST00000334527 PAPPAQ13219 1627 aa27.62■■■□□ 2.01
NDEL1-201ENST00000334527 A0A1B0GUL7 405 aa27.62■■■□□ 2.01
NDEL1-201ENST00000334527 BRINP3Q76B58 766 aa27.62■■■□□ 2.01
NDEL1-201ENST00000334527 TNMDQ9H2S6 317 aa27.62■■■□□ 2.01
NDEL1-201ENST00000334527 TTC12Q9H892 705 aaPredicted RBP27.62■■■□□ 2.01
NDEL1-201ENST00000334527 PFKFB2O60825 505 aa27.61■■■□□ 2.01
NDEL1-201ENST00000334527 CIAO1O76071 339 aa27.61■■■□□ 2.01
NDEL1-201ENST00000334527 TYRO3Q06418 890 aa27.61■■■□□ 2.01
NDEL1-201ENST00000334527 NKX1-1Q15270 411 aaPredicted RBP27.61■■■□□ 2.01
NDEL1-201ENST00000334527 TICAM2Q86XR7 235 aa27.6■■■□□ 2.01
NDEL1-201ENST00000334527 PUS3Q9BZE2 481 aaKnown RBP27.6■■■□□ 2.01
NDEL1-201ENST00000334527 COL5A2P05997 1499 aaPredicted RBP27.6■■■□□ 2.01
NDEL1-201ENST00000334527 HSPD1P10809 573 aaKnown RBP27.6■■■□□ 2.01
NDEL1-201ENST00000334527 CKAP2LQ8IYA6 745 aa27.6■■■□□ 2.01
NDEL1-201ENST00000334527 SMARCC2Q8TAQ2 1214 aa27.6■■■□□ 2.01
NDEL1-201ENST00000334527 LLPHQ9BRT6 129 aaKnown RBP27.6■■■□□ 2.01
NDEL1-201ENST00000334527 ATG3Q9NT62 314 aa27.6■■■□□ 2.01
NDEL1-201ENST00000334527 DDX19AQ9NUU7 478 aaKnown RBP27.6■■■□□ 2.01
NDEL1-201ENST00000334527 MRVI1Q9Y6F6 885 aa27.6■■■□□ 2.01
NDEL1-201ENST00000334527 IL2RBP14784 551 aa27.59■■■□□ 2.01
NDEL1-201ENST00000334527 FAM200AQ8TCP9 573 aa27.59■■■□□ 2.01
NDEL1-201ENST00000334527 ZSCAN16Q9H4T2 348 aaPredicted RBP27.59■■■□□ 2.01
NDEL1-201ENST00000334527 MAST3O60307 1309 aa27.59■■■□□ 2.01
NDEL1-201ENST00000334527 RNF113AO15541 343 aaKnown RBP27.59■■■□□ 2.01
NDEL1-201ENST00000334527 APOBRQ0VD83 1088 aa27.59■■■□□ 2.01
NDEL1-201ENST00000334527 PIBF1Q8WXW3 757 aa27.59■■■□□ 2.01
NDEL1-201ENST00000334527 PGBD1Q96JS3 809 aa27.59■■■□□ 2.01
NDEL1-201ENST00000334527 BICD2Q8TD16 824 aa27.58■■■□□ 2.01
NDEL1-201ENST00000334527 UQCRHLA0A096LP55 91 aa27.58■■■□□ 2.01
NDEL1-201ENST00000334527 A0A0G2JLW4 131 aa27.58■■■□□ 2.01
NDEL1-201ENST00000334527 UQCRHP07919 91 aa27.58■■■□□ 2.01
NDEL1-201ENST00000334527 NSUN7Q8NE18 718 aaKnown RBP27.58■■■□□ 2.01
NDEL1-201ENST00000334527 E7EWF7 191 aa27.57■■■□□ 2
NDEL1-201ENST00000334527 EXOSC10Q01780 885 aaKnown RBP27.57■■■□□ 2
NDEL1-201ENST00000334527 CLSTN2Q9H4D0 955 aa27.57■■■□□ 2
NDEL1-201ENST00000334527 SASS6Q6UVJ0 657 aa27.57■■■□□ 2
NDEL1-201ENST00000334527 CEP126Q9P2H0 1117 aa27.57■■■□□ 2
NDEL1-201ENST00000334527 TNS2Q63HR2 1409 aa27.57■■■□□ 2
NDEL1-201ENST00000334527 SPEF2Q9C093 1822 aa27.56■■■□□ 2
NDEL1-201ENST00000334527 NR1I2O75469 434 aa27.56■■■□□ 2
NDEL1-201ENST00000334527 CCDC57Q2TAC2 916 aa27.56■■■□□ 2
NDEL1-201ENST00000334527 AGXT2Q9BYV1 514 aa27.56■■■□□ 2
NDEL1-201ENST00000334527 CFAP45Q9UL16 551 aa27.56■■■□□ 2
NDEL1-201ENST00000334527 CTDNEP1O95476 244 aa27.55■■■□□ 2
NDEL1-201ENST00000334527 ISCA1Q9BUE6 129 aa27.55■■■□□ 2
NDEL1-201ENST00000334527 CARD10Q9BWT7 1032 aa27.55■■■□□ 2
NDEL1-201ENST00000334527 ZNF330Q9Y3S2 320 aaPredicted RBP27.55■■■□□ 2
NDEL1-201ENST00000334527 SHANK3Q9BYB0 1731 aa27.55■■■□□ 2
NDEL1-201ENST00000334527 PTPDC1A2A3K4 754 aa27.55■■■□□ 2
NDEL1-201ENST00000334527 M0R2C6 588 aa27.55■■■□□ 2
NDEL1-201ENST00000334527 FOSBP53539 338 aa27.55■■■□□ 2
NDEL1-201ENST00000334527 FKBP4Q02790 459 aaKnown RBP eCLIP27.55■■■□□ 2
NDEL1-201ENST00000334527 NOLC1Q14978 699 aaKnown RBP eCLIP27.55■■■□□ 2
NDEL1-201ENST00000334527 RBM43Q6ZSC3 357 aaKnown RBP27.55■■■□□ 2
NDEL1-201ENST00000334527 XIRP1Q702N8 1843 aaKnown RBP27.54■■■□□ 2
NDEL1-201ENST00000334527 CCT2P78371 535 aaKnown RBP27.54■■■□□ 2
NDEL1-201ENST00000334527 DNTTIP2Q5QJE6 756 aaKnown RBP27.54■■■□□ 2
NDEL1-201ENST00000334527 LUZP1Q86V48 1076 aa27.54■■■□□ 2
NDEL1-201ENST00000334527 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.54■■■□□ 2
NDEL1-201ENST00000334527 HMGN5P82970 282 aaKnown RBP27.53■■■□□ 2
NDEL1-201ENST00000334527 ANO6Q4KMQ2 910 aa27.53■■■□□ 2
NDEL1-201ENST00000334527 NAP1L2Q9ULW6 460 aaPredicted RBP27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms