RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 MAP3K21Q5TCX8 1036 aa11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 NBPF6Q5VWK0 638 aa11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 NBPF5PQ86XG9 351 aaPredicted RBP11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 NBPF4Q96M43 638 aa11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 SIL1Q9H173 461 aa11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 EXOC4Q96A65 974 aa11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 SETD1BQ9UPS6 1966 aaKnown RBP11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 USP6NLQ92738 828 aa11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 NCAPGQ9BPX3 1015 aa11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 TAOK1Q7L7X3 1001 aa11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 MRFAP1L1Q96HT8 127 aa11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 TTC12Q9H892 705 aaPredicted RBP11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 CWC27Q6UX04 472 aaKnown RBP11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 GFM2Q969S9 779 aaKnown RBP11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 PEG3Q9GZU2 1588 aa11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 A0A087WUV0 522 aaPredicted RBP11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 BCAP29Q9UHQ4 241 aa11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 GOLGA6BA6NDN3 693 aa11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 NBPF3Q9H094 633 aa11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 ANO6Q4KMQ2 910 aa11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 GSTA5Q7RTV2 222 aa11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 CTNNA3Q9UI47 895 aa11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 SMIM23A6NLE4 172 aa11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 PPFIA4O75335 1185 aa11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 CETN1Q12798 172 aa11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 MYOM3Q5VTT5 1437 aa11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 ANKRD36BQ8N2N9 1353 aa11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 N4BP2L2Q92802 583 aaPredicted RBP11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 MTIF2P46199 727 aaKnown RBP11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 SPAG1Q07617 926 aa11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 RAB11FIP4Q86YS3 637 aa11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 GSDMBQ8TAX9 411 aa11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 TRPC3Q13507 836 aa11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 NBPF9Q3BBW0 867 aa11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 ARMC2Q8NEN0 867 aa11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 PRPF31Q8WWY3 499 aaKnown RBP11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 PFDN4Q9NQP4 134 aa11.68□□□□□ -0.54
SPTBN1-201ENST00000333896 KRT13P13646 458 aa11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 PSME1Q06323 249 aa11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 INTS4Q96HW7 963 aaKnown RBP11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 RSPH3Q86UC2 560 aa11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 LCA5Q86VQ0 697 aa11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 EHBP1L1Q8N3D4 1523 aa11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 MUM1Q2TAK8 710 aa11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 ATL3Q6DD88 541 aa11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 CREB3O43889 395 aa11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 MGEA5O60502 916 aa11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 PEX19P40855 299 aa11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 PHLDB3Q6NSJ2 640 aa11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 SYNCQ9H7C4 482 aa11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 CAPN7Q9Y6W3 813 aa11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 SNX16P57768 344 aa11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 ZSCAN29Q8IWY8 852 aaPredicted RBP11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 SAAL1Q96ER3 474 aa11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 ZFXP17010 805 aaPredicted RBP11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 CCDC186Q7Z3E2 898 aa11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 RPAP2Q8IXW5 612 aaPredicted RBP11.67□□□□□ -0.54
SPTBN1-201ENST00000333896 ERCC6LQ2NKX8 1250 aa11.66□□□□□ -0.54
SPTBN1-201ENST00000333896 EFCAB5A4FU69 1503 aa11.66□□□□□ -0.54
SPTBN1-201ENST00000333896 CKAP2LQ8IYA6 745 aa11.66□□□□□ -0.54
SPTBN1-201ENST00000333896 EVI5O60447 810 aa11.66□□□□□ -0.54
SPTBN1-201ENST00000333896 CNNM3Q8NE01 707 aa11.66□□□□□ -0.54
SPTBN1-201ENST00000333896 CENPKQ9BS16 269 aa11.66□□□□□ -0.54
SPTBN1-201ENST00000333896 RABEP2Q9H5N1 569 aa11.66□□□□□ -0.54
SPTBN1-201ENST00000333896 FYB2Q5VWT5 728 aa11.66□□□□□ -0.54
SPTBN1-201ENST00000333896 CNGA4Q8IV77 575 aa11.66□□□□□ -0.54
SPTBN1-201ENST00000333896 ZSCAN25Q6NSZ9 544 aa11.66□□□□□ -0.54
SPTBN1-201ENST00000333896 LRRC43Q8N309 656 aa11.66□□□□□ -0.54
SPTBN1-201ENST00000333896 ADAMTS8Q9UP79 889 aa11.66□□□□□ -0.54
SPTBN1-201ENST00000333896 IFT20Q8IY31 132 aa11.66□□□□□ -0.54
SPTBN1-201ENST00000333896 CCHCR1Q8TD31 782 aa11.66□□□□□ -0.54
SPTBN1-201ENST00000333896 KCNK9Q9NPC2 374 aa11.66□□□□□ -0.54
SPTBN1-201ENST00000333896 EFCAB8A8MWE9 144 aa11.66□□□□□ -0.54
SPTBN1-201ENST00000333896 TYRO3Q06418 890 aa11.66□□□□□ -0.54
SPTBN1-201ENST00000333896 ZSCAN22P10073 491 aaPredicted RBP11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 TCERG1LQ5VWI1 586 aa11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 CCDC62Q6P9F0 684 aa11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 SF3B2Q13435 895 aaKnown RBP11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 EIF2AK4Q9P2K8 1649 aaKnown RBP11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 MYO9BQ13459 2157 aa11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 ATP2A1O14983 1001 aa11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 ELF2Q15723 593 aa11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 RUFY3Q7L099 469 aa11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 VPS52Q8N1B4 723 aa11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 KCNG4Q8TDN1 519 aa11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 POLE3Q9NRF9 147 aa11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 IGSF3O75054 1194 aa11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 LMBR1Q8WVP7 490 aa11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 SPINK5Q9NQ38 1064 aaPredicted RBP11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 PAIP2BQ9ULR5 123 aaKnown RBP11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 DCAF8L1A6NGE4 600 aa11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 RAB11FIP3O75154 756 aa11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 TBC1D5Q92609 795 aa11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 XAB2Q9HCS7 855 aaKnown RBP11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 U3KPZ7 1027 aaPredicted RBP11.65□□□□□ -0.54
SPTBN1-201ENST00000333896 TNNC1P63316 161 aa11.65□□□□□ -0.55
SPTBN1-201ENST00000333896 RMND1Q9NWS8 449 aa11.65□□□□□ -0.55
SPTBN1-201ENST00000333896 PSMD6Q15008 389 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 GEN1Q17RS7 908 aa11.64□□□□□ -0.55
SPTBN1-201ENST00000333896 CXorf38Q8TB03 319 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms