RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 TSHZ3Q63HK5 1081 aa10.67□□□□□ -0.7
LSAMP-201ENST00000333617 SNX21Q969T3 373 aa10.67□□□□□ -0.7
LSAMP-201ENST00000333617 MYD88Q99836 296 aa10.67□□□□□ -0.7
LSAMP-201ENST00000333617 SLKQ9H2G2 1235 aaPredicted RBP10.67□□□□□ -0.7
LSAMP-201ENST00000333617 TJP1Q07157 1748 aa10.67□□□□□ -0.7
LSAMP-201ENST00000333617 NRAPQ86VF7 1730 aa10.66□□□□□ -0.7
LSAMP-201ENST00000333617 REC8O95072 547 aa10.66□□□□□ -0.7
LSAMP-201ENST00000333617 NFKBIBQ15653 356 aa10.66□□□□□ -0.7
LSAMP-201ENST00000333617 NUTM1Q86Y26 1132 aa10.66□□□□□ -0.7
LSAMP-201ENST00000333617 SUCLG2Q96I99 432 aa10.66□□□□□ -0.7
LSAMP-201ENST00000333617 KIF2CQ99661 725 aa10.66□□□□□ -0.7
LSAMP-201ENST00000333617 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.66□□□□□ -0.7
LSAMP-201ENST00000333617 TNS2Q63HR2 1409 aa10.65□□□□□ -0.7
LSAMP-201ENST00000333617 MYH3P11055 1940 aa10.65□□□□□ -0.7
LSAMP-201ENST00000333617 ERC2O15083 957 aa10.65□□□□□ -0.7
LSAMP-201ENST00000333617 PIP4K2AP48426 406 aaPredicted RBP10.65□□□□□ -0.7
LSAMP-201ENST00000333617 KCNC4Q03721 635 aa10.65□□□□□ -0.7
LSAMP-201ENST00000333617 GCKRQ14397 625 aa10.65□□□□□ -0.7
LSAMP-201ENST00000333617 ERC1Q8IUD2 1116 aa10.65□□□□□ -0.7
LSAMP-201ENST00000333617 USP26Q9BXU7 913 aa10.65□□□□□ -0.7
LSAMP-201ENST00000333617 BICC1Q9H694 974 aaKnown RBP10.65□□□□□ -0.7
LSAMP-201ENST00000333617 DOT1LQ8TEK3 1739 aa10.65□□□□□ -0.7
LSAMP-201ENST00000333617 ANKRD36CQ5JPF3 1778 aa10.65□□□□□ -0.71
LSAMP-201ENST00000333617 LRP6O75581 1613 aa10.65□□□□□ -0.71
LSAMP-201ENST00000333617 PLBD2Q8NHP8 589 aa10.65□□□□□ -0.71
LSAMP-201ENST00000333617 RILPL2Q969X0 211 aa10.65□□□□□ -0.71
LSAMP-201ENST00000333617 KAZALD1Q96I82 304 aa10.65□□□□□ -0.71
LSAMP-201ENST00000333617 ANTXR1Q9H6X2 564 aa10.65□□□□□ -0.71
LSAMP-201ENST00000333617 TMOD3Q9NYL9 352 aa10.65□□□□□ -0.71
LSAMP-201ENST00000333617 NWD2Q9ULI1 1742 aa10.64□□□□□ -0.71
LSAMP-201ENST00000333617 NUP98P52948 1817 aa10.64□□□□□ -0.71
LSAMP-201ENST00000333617 DISP2A7MBM2 1401 aa10.64□□□□□ -0.71
LSAMP-201ENST00000333617 CLASRPQ8N2M8 674 aaKnown RBP10.64□□□□□ -0.71
LSAMP-201ENST00000333617 PTCD1O75127 700 aaKnown RBP10.63□□□□□ -0.71
LSAMP-201ENST00000333617 RNF40O75150 1001 aa10.63□□□□□ -0.71
LSAMP-201ENST00000333617 RABEP1Q15276 862 aa10.63□□□□□ -0.71
LSAMP-201ENST00000333617 NBPF14Q5TI25 921 aa10.63□□□□□ -0.71
LSAMP-201ENST00000333617 SMYD5Q6GMV2 418 aa10.63□□□□□ -0.71
LSAMP-201ENST00000333617 NBPF10Q6P3W6 841 aaKnown RBP10.63□□□□□ -0.71
LSAMP-201ENST00000333617 NBPF15Q8N660 670 aa10.63□□□□□ -0.71
LSAMP-201ENST00000333617 ESYT1Q9BSJ8 1104 aa10.63□□□□□ -0.71
LSAMP-201ENST00000333617 PA2G4Q9UQ80 394 aaKnown RBP10.63□□□□□ -0.71
LSAMP-201ENST00000333617 TTC41PQ6P2S7 1318 aa10.63□□□□□ -0.71
LSAMP-201ENST00000333617 USP42Q9H9J4 1324 aaKnown RBP10.63□□□□□ -0.71
LSAMP-201ENST00000333617 COL15A1P39059 1388 aa10.62□□□□□ -0.71
LSAMP-201ENST00000333617 TESPA1A2RU30 521 aaPredicted RBP10.62□□□□□ -0.71
LSAMP-201ENST00000333617 CHMLP26374 656 aa10.62□□□□□ -0.71
LSAMP-201ENST00000333617 G3BP1Q13283 466 aaKnown RBP eCLIP10.62□□□□□ -0.71
LSAMP-201ENST00000333617 SLF2Q8IX21 1173 aa10.62□□□□□ -0.71
LSAMP-201ENST00000333617 PI4K2BQ8TCG2 481 aa10.62□□□□□ -0.71
LSAMP-201ENST00000333617 GPATCH3Q96I76 525 aa10.62□□□□□ -0.71
LSAMP-201ENST00000333617 A1BGP04217 495 aa10.61□□□□□ -0.71
LSAMP-201ENST00000333617 SWT1Q5T5J6 900 aaKnown RBP10.61□□□□□ -0.71
LSAMP-201ENST00000333617 UNC5CLQ8IV45 518 aa10.61□□□□□ -0.71
LSAMP-201ENST00000333617 A0A087WZG4 1122 aa10.6□□□□□ -0.71
LSAMP-201ENST00000333617 ATP5J2-PTCD1G3V325 749 aa10.6□□□□□ -0.71
LSAMP-201ENST00000333617 K7ELQ4 463 aaPredicted RBP10.6□□□□□ -0.71
LSAMP-201ENST00000333617 FRAT2O75474 233 aaPredicted RBP10.6□□□□□ -0.71
LSAMP-201ENST00000333617 GLRX3O76003 335 aaKnown RBP10.6□□□□□ -0.71
LSAMP-201ENST00000333617 IFIT2P09913 472 aaKnown RBP10.6□□□□□ -0.71
LSAMP-201ENST00000333617 EPHA10Q5JZY3 1008 aa10.6□□□□□ -0.71
LSAMP-201ENST00000333617 CNTROBQ8N137 903 aa10.6□□□□□ -0.71
LSAMP-201ENST00000333617 PIGBQ92521 554 aa10.6□□□□□ -0.71
LSAMP-201ENST00000333617 TEX13AQ9BXU3 409 aaPredicted RBP10.6□□□□□ -0.71
LSAMP-201ENST00000333617 CHMP5Q9NZZ3 219 aa10.6□□□□□ -0.71
LSAMP-201ENST00000333617 EXOC5O00471 708 aa10.6□□□□□ -0.71
LSAMP-201ENST00000333617 MCCP23508 829 aa10.6□□□□□ -0.71
LSAMP-201ENST00000333617 TTLL7Q6ZT98 887 aa10.6□□□□□ -0.71
LSAMP-201ENST00000333617 UBE3BQ7Z3V4 1068 aa10.6□□□□□ -0.71
LSAMP-201ENST00000333617 AACSQ86V21 672 aa10.6□□□□□ -0.71
LSAMP-201ENST00000333617 VSIG10Q8N0Z9 540 aa10.6□□□□□ -0.71
LSAMP-201ENST00000333617 RBM46Q8TBY0 533 aaKnown RBP10.6□□□□□ -0.71
LSAMP-201ENST00000333617 ECHDC1Q9NTX5 307 aa10.6□□□□□ -0.71
LSAMP-201ENST00000333617 SASH1O94885 1247 aa10.59□□□□□ -0.71
LSAMP-201ENST00000333617 CD2BP2O95400 341 aaKnown RBP10.59□□□□□ -0.71
LSAMP-201ENST00000333617 MAP4K4O95819 1239 aaPredicted RBP10.59□□□□□ -0.71
LSAMP-201ENST00000333617 JARID2Q92833 1246 aaPredicted RBP10.59□□□□□ -0.71
LSAMP-201ENST00000333617 SIL1Q9H173 461 aa10.59□□□□□ -0.71
LSAMP-201ENST00000333617 CWC25Q9NXE8 425 aaPredicted RBP10.59□□□□□ -0.71
LSAMP-201ENST00000333617 ASAP1Q9ULH1 1129 aa10.59□□□□□ -0.71
LSAMP-201ENST00000333617 ADGRG1Q9Y653 693 aa10.59□□□□□ -0.71
LSAMP-201ENST00000333617 BCL9O00512 1426 aa10.58□□□□□ -0.72
LSAMP-201ENST00000333617 HSP90AA1P07900 732 aaKnown RBP10.58□□□□□ -0.72
LSAMP-201ENST00000333617 CASP7P55210 303 aa10.58□□□□□ -0.72
LSAMP-201ENST00000333617 RABL6Q3YEC7 729 aaPredicted RBP10.58□□□□□ -0.72
LSAMP-201ENST00000333617 COPRSQ9NQ92 184 aa10.58□□□□□ -0.72
LSAMP-201ENST00000333617 ATG3Q9NT62 314 aa10.58□□□□□ -0.72
LSAMP-201ENST00000333617 MYH7P12883 1935 aa10.57□□□□□ -0.72
LSAMP-201ENST00000333617 H7C1W4 665 aa10.57□□□□□ -0.72
LSAMP-201ENST00000333617 EPB41L2O43491 1005 aaKnown RBP10.57□□□□□ -0.72
LSAMP-201ENST00000333617 ADAMTS2O95450 1211 aa10.57□□□□□ -0.72
LSAMP-201ENST00000333617 STARD3NLO95772 234 aa10.57□□□□□ -0.72
LSAMP-201ENST00000333617 DEKP35659 375 aaKnown RBP10.57□□□□□ -0.72
LSAMP-201ENST00000333617 CCDC191Q8NCU4 936 aa10.57□□□□□ -0.72
LSAMP-201ENST00000333617 CDCA7Q9BWT1 371 aaPredicted RBP10.57□□□□□ -0.72
LSAMP-201ENST00000333617 ZBTB3Q9H5J0 574 aa10.57□□□□□ -0.72
LSAMP-201ENST00000333617 ANO2Q9NQ90 1003 aa10.57□□□□□ -0.72
LSAMP-201ENST00000333617 TOM1O60784 492 aa10.56□□□□□ -0.72
LSAMP-201ENST00000333617 DNAJB2P25686 324 aa10.56□□□□□ -0.72
LSAMP-201ENST00000333617 DDIT3P35638 169 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms