RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 VGLL3A8MV65 326 aa18.2■□□□□ 0.5
SLIT3-201ENST00000332966 KRT18P05783 430 aaKnown RBP18.2■□□□□ 0.5
SLIT3-201ENST00000332966 CDC37L1Q7L3B6 337 aa18.2■□□□□ 0.5
SLIT3-201ENST00000332966 G2E3Q7L622 706 aa18.2■□□□□ 0.5
SLIT3-201ENST00000332966 KCNH5Q8NCM2 988 aa18.2■□□□□ 0.5
SLIT3-201ENST00000332966 MRFAP1L1Q96HT8 127 aa18.2■□□□□ 0.5
SLIT3-201ENST00000332966 TMX4Q9H1E5 349 aaPredicted RBP18.2■□□□□ 0.5
SLIT3-201ENST00000332966 HAND2P61296 217 aa18.2■□□□□ 0.5
SLIT3-201ENST00000332966 LZTFL1Q9NQ48 299 aa18.2■□□□□ 0.5
SLIT3-201ENST00000332966 A0A087WZG4 1122 aa18.2■□□□□ 0.5
SLIT3-201ENST00000332966 A0A1B0GVL5 298 aa18.2■□□□□ 0.5
SLIT3-201ENST00000332966 IBSPP21815 317 aaPredicted RBP18.2■□□□□ 0.5
SLIT3-201ENST00000332966 MTMR6Q9Y217 621 aa18.2■□□□□ 0.5
SLIT3-201ENST00000332966 ZNF569Q5MCW4 686 aa18.2■□□□□ 0.5
SLIT3-201ENST00000332966 MPRIPQ6WCQ1 1025 aa18.2■□□□□ 0.5
SLIT3-201ENST00000332966 USHBP1Q8N6Y0 703 aa18.2■□□□□ 0.5
SLIT3-201ENST00000332966 SLC27A2O14975 620 aa18.19■□□□□ 0.5
SLIT3-201ENST00000332966 OAS2P29728 719 aaKnown RBP18.19■□□□□ 0.5
SLIT3-201ENST00000332966 FAM69CQ0P6D2 419 aa18.19■□□□□ 0.5
SLIT3-201ENST00000332966 BCORL1Q5H9F3 1711 aa18.19■□□□□ 0.5
SLIT3-201ENST00000332966 SBNO2Q9Y2G9 1366 aa18.19■□□□□ 0.5
SLIT3-201ENST00000332966 MICU3Q86XE3 530 aa18.19■□□□□ 0.5
SLIT3-201ENST00000332966 BMP2KQ9NSY1 1161 aaPredicted RBP18.19■□□□□ 0.5
SLIT3-201ENST00000332966 GRM8O00222 908 aa18.19■□□□□ 0.5
SLIT3-201ENST00000332966 IL13P35225 146 aa18.19■□□□□ 0.5
SLIT3-201ENST00000332966 FANCCQ00597 558 aa18.19■□□□□ 0.5
SLIT3-201ENST00000332966 MTHFSDQ2M296 383 aaKnown RBP18.19■□□□□ 0.5
SLIT3-201ENST00000332966 CACNA2D4Q7Z3S7 1137 aa18.19■□□□□ 0.5
SLIT3-201ENST00000332966 RHOXF2BP0C7M4 288 aa18.18■□□□□ 0.5
SLIT3-201ENST00000332966 CYLC1P35663 651 aaPredicted RBP18.18■□□□□ 0.5
SLIT3-201ENST00000332966 LRRC8AQ8IWT6 810 aa18.18■□□□□ 0.5
SLIT3-201ENST00000332966 RHOXF2Q9BQY4 288 aa18.18■□□□□ 0.5
SLIT3-201ENST00000332966 FAM135BQ49AJ0 1406 aa18.18■□□□□ 0.5
SLIT3-201ENST00000332966 RAD21O60216 631 aa18.18■□□□□ 0.5
SLIT3-201ENST00000332966 ANXA1P04083 346 aa18.18■□□□□ 0.5
SLIT3-201ENST00000332966 ARHGAP6O43182 974 aa18.18■□□□□ 0.5
SLIT3-201ENST00000332966 APOBRQ0VD83 1088 aa18.18■□□□□ 0.5
SLIT3-201ENST00000332966 ERCC6LQ2NKX8 1250 aa18.18■□□□□ 0.5
SLIT3-201ENST00000332966 METTL24Q5JXM2 366 aa18.18■□□□□ 0.5
SLIT3-201ENST00000332966 CCDC91Q7Z6B0 441 aa18.18■□□□□ 0.5
SLIT3-201ENST00000332966 CCDC82Q8N4S0 544 aa18.18■□□□□ 0.5
SLIT3-201ENST00000332966 INCENPQ9NQS7 918 aa18.18■□□□□ 0.5
SLIT3-201ENST00000332966 PA2G4Q9UQ80 394 aaKnown RBP18.18■□□□□ 0.5
SLIT3-201ENST00000332966 ZSCAN26Q16670 478 aa18.18■□□□□ 0.5
SLIT3-201ENST00000332966 RAB11FIP4Q86YS3 637 aa18.18■□□□□ 0.5
SLIT3-201ENST00000332966 FGFR1OPO95684 399 aaKnown RBP18.17■□□□□ 0.5
SLIT3-201ENST00000332966 NF2P35240 595 aa18.17■□□□□ 0.5
SLIT3-201ENST00000332966 TMEM67Q5HYA8 995 aa18.17■□□□□ 0.5
SLIT3-201ENST00000332966 KSR2Q6VAB6 950 aa18.17■□□□□ 0.5
SLIT3-201ENST00000332966 SLC26A8Q96RN1 970 aa18.17■□□□□ 0.5
SLIT3-201ENST00000332966 CHMP4BP1P59074 171 aa18.17■□□□□ 0.5
SLIT3-201ENST00000332966 G3V3G9 751 aa18.17■□□□□ 0.5
SLIT3-201ENST00000332966 DCAF8Q5TAQ9 597 aa18.17■□□□□ 0.5
SLIT3-201ENST00000332966 SOGA3Q5TF21 947 aa18.17■□□□□ 0.5
SLIT3-201ENST00000332966 PNMA6EA0A0J9YXQ4 647 aa18.17■□□□□ 0.5
SLIT3-201ENST00000332966 IFFO1Q0D2I5 559 aa18.17■□□□□ 0.5
SLIT3-201ENST00000332966 NUTM2AQ8IVF1 878 aaPredicted RBP18.17■□□□□ 0.5
SLIT3-201ENST00000332966 PPM1EQ8WY54 764 aa18.17■□□□□ 0.5
SLIT3-201ENST00000332966 SLC26A6Q9BXS9 759 aa18.17■□□□□ 0.5
SLIT3-201ENST00000332966 OSBPL3Q9H4L5 887 aa18.17■□□□□ 0.5
SLIT3-201ENST00000332966 ACEP12821 1306 aa18.17■□□□□ 0.5
SLIT3-201ENST00000332966 ZFYP08048 801 aaPredicted RBP18.16■□□□□ 0.5
SLIT3-201ENST00000332966 HLTFQ14527 1009 aaKnown RBP eCLIP18.16■□□□□ 0.5
SLIT3-201ENST00000332966 DISP1Q96F81 1524 aa18.16■□□□□ 0.5
SLIT3-201ENST00000332966 SMC1AQ14683 1233 aaKnown RBP18.16■□□□□ 0.5
SLIT3-201ENST00000332966 GPR161Q8N6U8 529 aaKnown RBP18.16■□□□□ 0.5
SLIT3-201ENST00000332966 PLEKHF1Q96S99 279 aa18.16■□□□□ 0.5
SLIT3-201ENST00000332966 ZNF518AQ6AHZ1 1483 aa18.16■□□□□ 0.5
SLIT3-201ENST00000332966 BMP15O95972 392 aa18.16■□□□□ 0.5
SLIT3-201ENST00000332966 MTIF2P46199 727 aaKnown RBP18.16■□□□□ 0.5
SLIT3-201ENST00000332966 RNF41Q9H4P4 317 aaPredicted RBP18.16■□□□□ 0.5
SLIT3-201ENST00000332966 EIF4G3O43432 1585 aaKnown RBP18.16■□□□□ 0.5
SLIT3-201ENST00000332966 OTUD6BQ8N6M0 293 aa18.16■□□□□ 0.5
SLIT3-201ENST00000332966 TDRD7Q8NHU6 1098 aaKnown RBP18.16■□□□□ 0.5
SLIT3-201ENST00000332966 RMND1Q9NWS8 449 aa18.16■□□□□ 0.5
SLIT3-201ENST00000332966 AKR1B15C9JRZ8 316 aaPredicted RBP18.15■□□□□ 0.5
SLIT3-201ENST00000332966 MAATS1Q7Z4T9 603 aa18.15■□□□□ 0.5
SLIT3-201ENST00000332966 FAM114A1Q8IWE2 563 aa18.15■□□□□ 0.5
SLIT3-201ENST00000332966 FAM76AQ8TAV0 307 aa18.15■□□□□ 0.5
SLIT3-201ENST00000332966 NPATQ14207 1427 aa18.15■□□□□ 0.5
SLIT3-201ENST00000332966 MATR3P43243 847 aaKnown RBP eCLIP18.15■□□□□ 0.5
SLIT3-201ENST00000332966 NAA16Q6N069 864 aaPredicted RBP18.15■□□□□ 0.5
SLIT3-201ENST00000332966 ZRANB1Q9UGI0 708 aa18.15■□□□□ 0.5
SLIT3-201ENST00000332966 MKRN1Q9UHC7 482 aaKnown RBP18.15■□□□□ 0.5
SLIT3-201ENST00000332966 KIAA0232Q92628 1395 aa18.15■□□□□ 0.5
SLIT3-201ENST00000332966 KRT83P78385 493 aa18.15■□□□□ 0.5
SLIT3-201ENST00000332966 UBE3BQ7Z3V4 1068 aa18.15■□□□□ 0.5
SLIT3-201ENST00000332966 CNGA4Q8IV77 575 aa18.15■□□□□ 0.5
SLIT3-201ENST00000332966 LINS1Q8NG48 757 aa18.15■□□□□ 0.5
SLIT3-201ENST00000332966 MAP2K1Q02750 393 aaPredicted RBP18.15■□□□□ 0.5
SLIT3-201ENST00000332966 BCCIPQ9P287 314 aaKnown RBP eCLIP18.15■□□□□ 0.5
SLIT3-201ENST00000332966 NSFL1CQ9UNZ2 370 aaKnown RBP18.15■□□□□ 0.5
SLIT3-201ENST00000332966 ZBTB43O43298 467 aa18.14■□□□□ 0.49
SLIT3-201ENST00000332966 WDHD1O75717 1129 aaPredicted RBP18.14■□□□□ 0.49
SLIT3-201ENST00000332966 ENOX2Q16206 610 aaKnown RBP18.14■□□□□ 0.49
SLIT3-201ENST00000332966 ME3Q16798 604 aa18.14■□□□□ 0.49
SLIT3-201ENST00000332966 TTC6Q86TZ1 520 aa18.14■□□□□ 0.49
SLIT3-201ENST00000332966 AFAP1L1Q8TED9 768 aa18.14■□□□□ 0.49
SLIT3-201ENST00000332966 SYTL4Q96C24 671 aaPredicted RBP18.14■□□□□ 0.49
SLIT3-201ENST00000332966 LRP2BPQ9P2M1 347 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms