RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 ZNF75DP51815 510 aa21.67■■□□□ 1.06
NPLOC4-201ENST00000331134 CDC37L1Q7L3B6 337 aa21.67■■□□□ 1.06
NPLOC4-201ENST00000331134 TMCO5BA8MYB1 307 aa21.67■■□□□ 1.06
NPLOC4-201ENST00000331134 POTEB2H3BUK9 544 aa21.67■■□□□ 1.06
NPLOC4-201ENST00000331134 ZBTB43O43298 467 aa21.67■■□□□ 1.06
NPLOC4-201ENST00000331134 ZNF500O60304 480 aaPredicted RBP21.67■■□□□ 1.06
NPLOC4-201ENST00000331134 CEBPAP49715 358 aaPredicted RBP21.67■■□□□ 1.06
NPLOC4-201ENST00000331134 IQSEC3Q9UPP2 1182 aaPredicted RBP21.67■■□□□ 1.06
NPLOC4-201ENST00000331134 GTF2A1P52655 376 aaPredicted RBP21.66■■□□□ 1.06
NPLOC4-201ENST00000331134 ZNF569Q5MCW4 686 aa21.66■■□□□ 1.06
NPLOC4-201ENST00000331134 RRAGBQ5VZM2 374 aa21.66■■□□□ 1.06
NPLOC4-201ENST00000331134 DHX58Q96C10 678 aa21.66■■□□□ 1.06
NPLOC4-201ENST00000331134 ERO1AQ96HE7 468 aa21.66■■□□□ 1.06
NPLOC4-201ENST00000331134 TRMT112Q9UI30 125 aaKnown RBP21.66■■□□□ 1.06
NPLOC4-201ENST00000331134 PHF8Q9UPP1 1060 aa21.66■■□□□ 1.06
NPLOC4-201ENST00000331134 IGHMBP2P38935 993 aaKnown RBP21.66■■□□□ 1.06
NPLOC4-201ENST00000331134 KIF20AO95235 890 aa21.66■■□□□ 1.06
NPLOC4-201ENST00000331134 MCM3P25205 808 aa21.66■■□□□ 1.06
NPLOC4-201ENST00000331134 TRIM47Q96LD4 638 aa21.66■■□□□ 1.06
NPLOC4-201ENST00000331134 NUP153P49790 1475 aaKnown RBP21.66■■□□□ 1.06
NPLOC4-201ENST00000331134 KAT6BQ8WYB5 2073 aa21.66■■□□□ 1.06
NPLOC4-201ENST00000331134 GRIN2AQ12879 1464 aa21.66■■□□□ 1.06
NPLOC4-201ENST00000331134 PRC1O43663 620 aa21.66■■□□□ 1.06
NPLOC4-201ENST00000331134 CCDC175P0C221 793 aa21.66■■□□□ 1.06
NPLOC4-201ENST00000331134 TERF1P54274 439 aa21.66■■□□□ 1.06
NPLOC4-201ENST00000331134 GUCA1BQ9UMX6 200 aa21.66■■□□□ 1.06
NPLOC4-201ENST00000331134 SGSM2O43147 1006 aa21.65■■□□□ 1.06
NPLOC4-201ENST00000331134 MICALL1Q8N3F8 863 aa21.65■■□□□ 1.06
NPLOC4-201ENST00000331134 GOLGA1Q92805 767 aa21.65■■□□□ 1.06
NPLOC4-201ENST00000331134 MKNK2Q9HBH9 465 aa21.65■■□□□ 1.06
NPLOC4-201ENST00000331134 JAK2O60674 1132 aa21.65■■□□□ 1.06
NPLOC4-201ENST00000331134 NUP160Q12769 1436 aa21.65■■□□□ 1.06
NPLOC4-201ENST00000331134 PRPF4BQ13523 1007 aaKnown RBP21.65■■□□□ 1.06
NPLOC4-201ENST00000331134 SPTY2D1Q68D10 685 aaPredicted RBP21.65■■□□□ 1.06
NPLOC4-201ENST00000331134 RABEP2Q9H5N1 569 aa21.65■■□□□ 1.06
NPLOC4-201ENST00000331134 NOP2P46087 812 aaKnown RBP21.64■■□□□ 1.06
NPLOC4-201ENST00000331134 LEO1Q8WVC0 666 aaPredicted RBP21.64■■□□□ 1.06
NPLOC4-201ENST00000331134 SSR1P43307 286 aaKnown RBP21.64■■□□□ 1.05
NPLOC4-201ENST00000331134 ERBB4Q15303 1308 aa21.64■■□□□ 1.05
NPLOC4-201ENST00000331134 PPARDQ03181 441 aa21.64■■□□□ 1.05
NPLOC4-201ENST00000331134 PPP2R3AQ06190 1150 aa21.64■■□□□ 1.05
NPLOC4-201ENST00000331134 ATRIPQ8WXE1 791 aa21.64■■□□□ 1.05
NPLOC4-201ENST00000331134 VAT1LQ9HCJ6 419 aa21.64■■□□□ 1.05
NPLOC4-201ENST00000331134 MAP2K1Q02750 393 aaPredicted RBP21.63■■□□□ 1.05
NPLOC4-201ENST00000331134 KSR2Q6VAB6 950 aa21.63■■□□□ 1.05
NPLOC4-201ENST00000331134 URB2Q14146 1524 aaKnown RBP21.63■■□□□ 1.05
NPLOC4-201ENST00000331134 MFSD6Q6ZSS7 791 aa21.63■■□□□ 1.05
NPLOC4-201ENST00000331134 KRBA2Q6ZNG9 492 aa21.62■■□□□ 1.05
NPLOC4-201ENST00000331134 DHX32Q7L7V1 743 aaKnown RBP21.62■■□□□ 1.05
NPLOC4-201ENST00000331134 CCDC96Q2M329 555 aa21.62■■□□□ 1.05
NPLOC4-201ENST00000331134 TRMT1LQ7Z2T5 733 aaKnown RBP21.62■■□□□ 1.05
NPLOC4-201ENST00000331134 GOLGA6L10A0A0M3HER8 536 aa21.62■■□□□ 1.05
NPLOC4-201ENST00000331134 CTAGE9A4FU28 777 aa21.62■■□□□ 1.05
NPLOC4-201ENST00000331134 FAM160A1Q05DH4 1040 aa21.62■■□□□ 1.05
NPLOC4-201ENST00000331134 TCERG1LQ5VWI1 586 aa21.62■■□□□ 1.05
NPLOC4-201ENST00000331134 CATIPQ7Z7H3 387 aa21.62■■□□□ 1.05
NPLOC4-201ENST00000331134 EYA1Q99502 592 aa21.62■■□□□ 1.05
NPLOC4-201ENST00000331134 TTC41PQ6P2S7 1318 aa21.62■■□□□ 1.05
NPLOC4-201ENST00000331134 NBPF7P0C2Y1 421 aaPredicted RBP21.61■■□□□ 1.05
NPLOC4-201ENST00000331134 ZNF215Q9UL58 517 aaPredicted RBP21.61■■□□□ 1.05
NPLOC4-201ENST00000331134 PYCARDQ9ULZ3 195 aa21.61■■□□□ 1.05
NPLOC4-201ENST00000331134 A2MP01023 1474 aa21.61■■□□□ 1.05
NPLOC4-201ENST00000331134 TCOF1Q13428 1488 aaKnown RBP21.61■■□□□ 1.05
NPLOC4-201ENST00000331134 MACROD2A1Z1Q3 448 aa21.61■■□□□ 1.05
NPLOC4-201ENST00000331134 ZEB2O60315 1214 aa21.61■■□□□ 1.05
NPLOC4-201ENST00000331134 LRRC59Q96AG4 307 aaKnown RBP21.61■■□□□ 1.05
NPLOC4-201ENST00000331134 CWC25Q9NXE8 425 aaPredicted RBP21.61■■□□□ 1.05
NPLOC4-201ENST00000331134 STARD3NLO95772 234 aa21.61■■□□□ 1.05
NPLOC4-201ENST00000331134 ATP10BO94823 1461 aa21.6■■□□□ 1.05
NPLOC4-201ENST00000331134 LINS1Q8NG48 757 aa21.6■■□□□ 1.05
NPLOC4-201ENST00000331134 CLSTN2Q9H4D0 955 aa21.6■■□□□ 1.05
NPLOC4-201ENST00000331134 SLC9C2Q5TAH2 1124 aa21.6■■□□□ 1.05
NPLOC4-201ENST00000331134 SLC27A2O14975 620 aa21.6■■□□□ 1.05
NPLOC4-201ENST00000331134 TIMM10P62072 90 aa21.6■■□□□ 1.05
NPLOC4-201ENST00000331134 TFCP2Q12800 502 aa21.6■■□□□ 1.05
NPLOC4-201ENST00000331134 ERCC6LQ2NKX8 1250 aa21.6■■□□□ 1.05
NPLOC4-201ENST00000331134 EDC3Q96F86 508 aaKnown RBP21.6■■□□□ 1.05
NPLOC4-201ENST00000331134 RAD50Q92878 1312 aa21.59■■□□□ 1.05
NPLOC4-201ENST00000331134 KANK3Q6NY19 840 aa21.59■■□□□ 1.05
NPLOC4-201ENST00000331134 ALS2CR12Q96Q35 445 aa21.59■■□□□ 1.05
NPLOC4-201ENST00000331134 BAG1Q99933 345 aaPredicted RBP21.59■■□□□ 1.05
NPLOC4-201ENST00000331134 PAG1Q9NWQ8 432 aa21.59■■□□□ 1.05
NPLOC4-201ENST00000331134 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.59■■□□□ 1.057e-7■■■■■ 98.1
NPLOC4-201ENST00000331134 UHRF1BP1Q6BDS2 1440 aa21.59■■□□□ 1.05
NPLOC4-201ENST00000331134 ANKRD18BA2A2Z9 1011 aa21.58■■□□□ 1.05
NPLOC4-201ENST00000331134 MYL5Q02045 173 aa21.58■■□□□ 1.05
NPLOC4-201ENST00000331134 WTAPQ15007 396 aa21.58■■□□□ 1.05
NPLOC4-201ENST00000331134 CCDC40Q4G0X9 1142 aa21.58■■□□□ 1.05
NPLOC4-201ENST00000331134 RNF41Q9H4P4 317 aaPredicted RBP21.58■■□□□ 1.05
NPLOC4-201ENST00000331134 IVLP07476 585 aa21.58■■□□□ 1.05
NPLOC4-201ENST00000331134 CHRNA2Q15822 529 aa21.58■■□□□ 1.05
NPLOC4-201ENST00000331134 ZSCAN29Q8IWY8 852 aaPredicted RBP21.58■■□□□ 1.05
NPLOC4-201ENST00000331134 BICC1Q9H694 974 aaKnown RBP21.58■■□□□ 1.05
NPLOC4-201ENST00000331134 ALDH1L1O75891 902 aa21.58■■□□□ 1.04
NPLOC4-201ENST00000331134 NSFL1CQ9UNZ2 370 aaKnown RBP21.58■■□□□ 1.04
NPLOC4-201ENST00000331134 RPS6KB1P23443 525 aa21.58■■□□□ 1.04
NPLOC4-201ENST00000331134 USP19O94966 1318 aa21.57■■□□□ 1.04
NPLOC4-201ENST00000331134 GSTTP1A0A1W2PQM5 241 aa21.57■■□□□ 1.04
NPLOC4-201ENST00000331134 CD109Q6YHK3 1445 aa21.57■■□□□ 1.04
NPLOC4-201ENST00000331134 NRBP1Q9UHY1 535 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms