RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 CCDC189A1A4V9 331 aa20.1■□□□□ 0.81
PRKCD-201ENST00000330452 FBXO38Q6PIJ6 1188 aa20.1■□□□□ 0.81
PRKCD-201ENST00000330452 AACSQ86V21 672 aa20.1■□□□□ 0.81
PRKCD-201ENST00000330452 DDX54Q8TDD1 881 aaKnown RBP20.1■□□□□ 0.81
PRKCD-201ENST00000330452 SLIT3O75094 1523 aa20.1■□□□□ 0.81
PRKCD-201ENST00000330452 LARGE1O95461 756 aa20.1■□□□□ 0.81
PRKCD-201ENST00000330452 KAZALD1Q96I82 304 aa20.1■□□□□ 0.81
PRKCD-201ENST00000330452 MED4Q9NPJ6 270 aa20.1■□□□□ 0.81
PRKCD-201ENST00000330452 RAI14Q9P0K7 980 aa20.1■□□□□ 0.81
PRKCD-201ENST00000330452 MEGF6O75095 1541 aa20.1■□□□□ 0.81
PRKCD-201ENST00000330452 ADCK5Q3MIX3 580 aa20.1■□□□□ 0.81
PRKCD-201ENST00000330452 GOLGA6L1Q8N7Z2 621 aa20.1■□□□□ 0.81
PRKCD-201ENST00000330452 CCDC112Q8NEF3 446 aa20.1■□□□□ 0.81
PRKCD-201ENST00000330452 LIMCH1Q9UPQ0 1083 aa20.1■□□□□ 0.81
PRKCD-201ENST00000330452 LMTK3Q96Q04 1460 aa20.09■□□□□ 0.81
PRKCD-201ENST00000330452 HEG1Q9ULI3 1381 aa20.09■□□□□ 0.81
PRKCD-201ENST00000330452 A0A1B0GUL7 405 aa20.09■□□□□ 0.81
PRKCD-201ENST00000330452 CYP27B1O15528 508 aa20.09■□□□□ 0.81
PRKCD-201ENST00000330452 PRPF40BQ6NWY9 871 aaKnown RBP20.09■□□□□ 0.81
PRKCD-201ENST00000330452 CCDC9Q9Y3X0 531 aaKnown RBP20.09■□□□□ 0.81
PRKCD-201ENST00000330452 GSCP56915 257 aaPredicted RBP20.09■□□□□ 0.81
PRKCD-201ENST00000330452 CCDC191Q8NCU4 936 aa20.09■□□□□ 0.81
PRKCD-201ENST00000330452 BICC1Q9H694 974 aaKnown RBP20.09■□□□□ 0.81
PRKCD-201ENST00000330452 GRM8O00222 908 aa20.08■□□□□ 0.81
PRKCD-201ENST00000330452 SASH1O94885 1247 aa20.08■□□□□ 0.8
PRKCD-201ENST00000330452 SRLQ86TD4 932 aa20.08■□□□□ 0.8
PRKCD-201ENST00000330452 CCDC8Q9H0W5 538 aaPredicted RBP20.08■□□□□ 0.8
PRKCD-201ENST00000330452 HYPKQ9NX55 129 aa20.08■□□□□ 0.8
PRKCD-201ENST00000330452 CNPY2Q9Y2B0 182 aa20.08■□□□□ 0.8
PRKCD-201ENST00000330452 TATP17735 454 aaPredicted RBP20.07■□□□□ 0.8
PRKCD-201ENST00000330452 TOM1L2Q6ZVM7 507 aa20.07■□□□□ 0.8
PRKCD-201ENST00000330452 LINS1Q8NG48 757 aa20.07■□□□□ 0.8
PRKCD-201ENST00000330452 RUFY2Q8WXA3 655 aa20.07■□□□□ 0.8
PRKCD-201ENST00000330452 JAKMIP1Q96N16 626 aaKnown RBP20.07■□□□□ 0.8
PRKCD-201ENST00000330452 SIL1Q9H173 461 aa20.07■□□□□ 0.8
PRKCD-201ENST00000330452 SYT1P21579 422 aa20.07■□□□□ 0.8
PRKCD-201ENST00000330452 PDIA6Q15084 440 aa20.07■□□□□ 0.8
PRKCD-201ENST00000330452 CCDC91Q7Z6B0 441 aa20.07■□□□□ 0.8
PRKCD-201ENST00000330452 PACS2Q86VP3 889 aa20.07■□□□□ 0.8
PRKCD-201ENST00000330452 GTF3C6Q969F1 213 aa20.07■□□□□ 0.8
PRKCD-201ENST00000330452 EAF2Q96CJ1 260 aaPredicted RBP20.07■□□□□ 0.8
PRKCD-201ENST00000330452 NCAPD2Q15021 1401 aa20.07■□□□□ 0.8
PRKCD-201ENST00000330452 ERC1Q8IUD2 1116 aa20.06■□□□□ 0.8
PRKCD-201ENST00000330452 KLHDC4Q8TBB5 520 aa20.06■□□□□ 0.8
PRKCD-201ENST00000330452 GPATCH3Q96I76 525 aa20.06■□□□□ 0.8
PRKCD-201ENST00000330452 C16orf45Q96MC5 204 aaPredicted RBP20.06■□□□□ 0.8
PRKCD-201ENST00000330452 TCHHQ07283 1943 aa20.06■□□□□ 0.8
PRKCD-201ENST00000330452 BMS1Q14692 1282 aaKnown RBP20.06■□□□□ 0.8
PRKCD-201ENST00000330452 TTC31Q49AM3 519 aaPredicted RBP20.06■□□□□ 0.8
PRKCD-201ENST00000330452 CCDC83Q8IWF9 413 aa20.06■□□□□ 0.8
PRKCD-201ENST00000330452 MNS1Q8NEH6 495 aa20.06■□□□□ 0.8
PRKCD-201ENST00000330452 FAM212AQ96EL1 285 aa20.06■□□□□ 0.8
PRKCD-201ENST00000330452 FAM227BQ96M60 508 aa20.06■□□□□ 0.8
PRKCD-201ENST00000330452 DEF6Q9H4E7 631 aa20.06■□□□□ 0.8
PRKCD-201ENST00000330452 DDX21Q9NR30 783 aaKnown RBP eCLIP20.06■□□□□ 0.8
PRKCD-201ENST00000330452 TLR7Q9NYK1 1049 aaKnown RBP20.06■□□□□ 0.8
PRKCD-201ENST00000330452 PAXBP1Q9Y5B6 917 aa20.06■□□□□ 0.8
PRKCD-201ENST00000330452 TNS3Q68CZ2 1445 aa20.06■□□□□ 0.8
PRKCD-201ENST00000330452 STX6O43752 255 aa20.05■□□□□ 0.8
PRKCD-201ENST00000330452 TPM3P06753 285 aa20.05■□□□□ 0.8
PRKCD-201ENST00000330452 ZSCAN22P10073 491 aaPredicted RBP20.05■□□□□ 0.8
PRKCD-201ENST00000330452 PHKG2P15735 406 aa20.05■□□□□ 0.8
PRKCD-201ENST00000330452 SMC3Q9UQE7 1217 aa20.05■□□□□ 0.8
PRKCD-201ENST00000330452 PHRF1Q9P1Y6 1649 aaKnown RBP20.05■□□□□ 0.8
PRKCD-201ENST00000330452 IGKV5-2P06315 115 aa20.05■□□□□ 0.8
PRKCD-201ENST00000330452 G3BP1Q13283 466 aaKnown RBP eCLIP20.05■□□□□ 0.8
PRKCD-201ENST00000330452 ZSCAN26Q16670 478 aa20.05■□□□□ 0.8
PRKCD-201ENST00000330452 EVI5LQ96CN4 794 aa20.05■□□□□ 0.8
PRKCD-201ENST00000330452 ZNF496Q96IT1 587 aaPredicted RBP20.05■□□□□ 0.8
PRKCD-201ENST00000330452 E2F4Q16254 413 aa20.04■□□□□ 0.8
PRKCD-201ENST00000330452 PDRG1Q9NUG6 133 aa20.04■□□□□ 0.8
PRKCD-201ENST00000330452 RRP15Q9Y3B9 282 aaKnown RBP20.04■□□□□ 0.8
PRKCD-201ENST00000330452 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.04■□□□□ 0.8
PRKCD-201ENST00000330452 CRYBG1Q9Y4K1 1723 aa20.04■□□□□ 0.8
PRKCD-201ENST00000330452 ALS2Q96Q42 1657 aa20.04■□□□□ 0.8
PRKCD-201ENST00000330452 SLFNL1Q499Z3 407 aa20.04■□□□□ 0.8
PRKCD-201ENST00000330452 RIC3Q7Z5B4 369 aa20.04■□□□□ 0.8
PRKCD-201ENST00000330452 SYAP1Q96A49 352 aaPredicted RBP20.04■□□□□ 0.8
PRKCD-201ENST00000330452 DDX58O95786 925 aaKnown RBP20.03■□□□□ 0.8
PRKCD-201ENST00000330452 COL9A3Q14050 684 aaPredicted RBP20.03■□□□□ 0.8
PRKCD-201ENST00000330452 USP16Q9Y5T5 823 aa20.03■□□□□ 0.8
PRKCD-201ENST00000330452 KAT6BQ8WYB5 2073 aa20.03■□□□□ 0.8
PRKCD-201ENST00000330452 KDM4AO75164 1064 aa20.03■□□□□ 0.8
PRKCD-201ENST00000330452 TEX35Q5T0J7 233 aa20.03■□□□□ 0.8
PRKCD-201ENST00000330452 BOLA2Q9H3K6 86 aa20.03■□□□□ 0.8
PRKCD-201ENST00000330452 STRCQ7RTU9 1775 aa20.03■□□□□ 0.8
PRKCD-201ENST00000330452 NMIQ13287 307 aaPredicted RBP20.02■□□□□ 0.8
PRKCD-201ENST00000330452 ZNF790Q6PG37 636 aa20.02■□□□□ 0.8
PRKCD-201ENST00000330452 LARP1Q6PKG0 1096 aaKnown RBP20.02■□□□□ 0.8
PRKCD-201ENST00000330452 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.02■□□□□ 0.8
PRKCD-201ENST00000330452 FBXO3Q9UK99 471 aa20.02■□□□□ 0.8
PRKCD-201ENST00000330452 V9GYY5 206 aaPredicted RBP20.02■□□□□ 0.8
PRKCD-201ENST00000330452 XIRP1Q702N8 1843 aaKnown RBP20.02■□□□□ 0.8
PRKCD-201ENST00000330452 KDM6AO15550 1401 aaPredicted RBP20.02■□□□□ 0.8
PRKCD-201ENST00000330452 CCDC171Q6TFL3 1326 aa20.02■□□□□ 0.8
PRKCD-201ENST00000330452 NECTIN1Q15223 517 aa20.02■□□□□ 0.8
PRKCD-201ENST00000330452 ZSWIM6Q9HCJ5 1215 aa20.02■□□□□ 0.8
PRKCD-201ENST00000330452 CWC15Q9P013 229 aaKnown RBP20.02■□□□□ 0.8
PRKCD-201ENST00000330452 RBM8AQ9Y5S9 174 aaKnown RBP20.02■□□□□ 0.8
PRKCD-201ENST00000330452 OVOS2A0A0G2JMS6 1433 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms