RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 ZNF330Q9Y3S2 320 aaPredicted RBP17.33■□□□□ 0.36
TPM3-206ENST00000330188 KDM4FA0A1W2PPD8 638 aa17.32■□□□□ 0.36
TPM3-206ENST00000330188 CSPP1Q1MSJ5 1256 aa17.32■□□□□ 0.36
TPM3-206ENST00000330188 SLFNL1Q499Z3 407 aa17.32■□□□□ 0.36
TPM3-206ENST00000330188 PCCAP05165 728 aaPredicted RBP17.32■□□□□ 0.36
TPM3-206ENST00000330188 IFIT1P09914 478 aaKnown RBP17.32■□□□□ 0.36
TPM3-206ENST00000330188 PDCP20941 246 aa17.32■□□□□ 0.36
TPM3-206ENST00000330188 ZMYM1Q5SVZ6 1142 aa17.32■□□□□ 0.36
TPM3-206ENST00000330188 CDC37L1Q7L3B6 337 aa17.32■□□□□ 0.36
TPM3-206ENST00000330188 RNF214Q8ND24 703 aa17.32■□□□□ 0.36
TPM3-206ENST00000330188 BTG4Q9NY30 223 aa17.32■□□□□ 0.36
TPM3-206ENST00000330188 DISP2A7MBM2 1401 aa17.31■□□□□ 0.36
TPM3-206ENST00000330188 STK3Q13188 491 aa17.31■□□□□ 0.36
TPM3-206ENST00000330188 CCDC57Q2TAC2 916 aa17.31■□□□□ 0.36
TPM3-206ENST00000330188 KIF6Q6ZMV9 814 aa17.31■□□□□ 0.36
TPM3-206ENST00000330188 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.31■□□□□ 0.36
TPM3-206ENST00000330188 PLA2G12BQ9BX93 195 aa17.31■□□□□ 0.36
TPM3-206ENST00000330188 HS1BP3Q53T59 392 aa17.3■□□□□ 0.36
TPM3-206ENST00000330188 Q6ZUG5 572 aa17.3■□□□□ 0.36
TPM3-206ENST00000330188 STOX1Q6ZVD7 989 aa17.3■□□□□ 0.36
TPM3-206ENST00000330188 DSCC1Q9BVC3 393 aa17.3■□□□□ 0.36
TPM3-206ENST00000330188 CEP126Q9P2H0 1117 aa17.3■□□□□ 0.36
TPM3-206ENST00000330188 FBXO3Q9UK99 471 aa17.3■□□□□ 0.36
TPM3-206ENST00000330188 ZSCAN30Q86W11 494 aa17.3■□□□□ 0.36
TPM3-206ENST00000330188 GTF3C6Q969F1 213 aa17.3■□□□□ 0.36
TPM3-206ENST00000330188 COL14A1Q05707 1796 aaKnown RBP17.3■□□□□ 0.36
TPM3-206ENST00000330188 STARD3NLO95772 234 aa17.29■□□□□ 0.36
TPM3-206ENST00000330188 ZBTB38Q8NAP3 1195 aaPredicted RBP17.29■□□□□ 0.36
TPM3-206ENST00000330188 FAM89AQ96GI7 184 aa17.29■□□□□ 0.36
TPM3-206ENST00000330188 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.29■□□□□ 0.36
TPM3-206ENST00000330188 MAP3K15Q6ZN16 1313 aa17.29■□□□□ 0.36
TPM3-206ENST00000330188 LRP6O75581 1613 aa17.29■□□□□ 0.36
TPM3-206ENST00000330188 ANKRD36CQ5JPF3 1778 aa17.29■□□□□ 0.36
TPM3-206ENST00000330188 PLCH1Q4KWH8 1693 aa17.29■□□□□ 0.36
TPM3-206ENST00000330188 MAST3O60307 1309 aa17.29■□□□□ 0.36
TPM3-206ENST00000330188 RNF113AO15541 343 aaKnown RBP17.29■□□□□ 0.36
TPM3-206ENST00000330188 LETM1O95202 739 aaPredicted RBP17.29■□□□□ 0.36
TPM3-206ENST00000330188 CSF1RP07333 972 aa17.29■□□□□ 0.36
TPM3-206ENST00000330188 TPRNQ4KMQ1 711 aa17.29■□□□□ 0.36
TPM3-206ENST00000330188 GIGYF2Q6Y7W6 1299 aaKnown RBP17.28■□□□□ 0.36
TPM3-206ENST00000330188 FERMT3Q86UX7 667 aa17.28■□□□□ 0.36
TPM3-206ENST00000330188 BCL9O00512 1426 aa17.28■□□□□ 0.36
TPM3-206ENST00000330188 HSPD1P10809 573 aaKnown RBP17.27■□□□□ 0.36
TPM3-206ENST00000330188 ANO8Q9HCE9 1232 aaPredicted RBP17.27■□□□□ 0.36
TPM3-206ENST00000330188 AKAP2Q9Y2D5 859 aa17.27■□□□□ 0.36
TPM3-206ENST00000330188 HMGB1P09429 215 aaKnown RBP17.27■□□□□ 0.35
TPM3-206ENST00000330188 ADORA1P30542 326 aa17.27■□□□□ 0.35
TPM3-206ENST00000330188 KRT85P78386 507 aa17.27■□□□□ 0.35
TPM3-206ENST00000330188 HLFQ16534 295 aa17.27■□□□□ 0.35
TPM3-206ENST00000330188 XAGE2Q96GT9 111 aa17.27■□□□□ 0.35
TPM3-206ENST00000330188 CCDC85AQ96PX6 553 aaPredicted RBP17.27■□□□□ 0.35
TPM3-206ENST00000330188 CDHR2Q9BYE9 1310 aa17.26■□□□□ 0.35
TPM3-206ENST00000330188 JAK2O60674 1132 aa17.26■□□□□ 0.35
TPM3-206ENST00000330188 TTC6Q86TZ1 520 aa17.26■□□□□ 0.35
TPM3-206ENST00000330188 BRF1Q92994 677 aa17.26■□□□□ 0.35
TPM3-206ENST00000330188 SLC4A9Q96Q91 983 aa17.26■□□□□ 0.35
TPM3-206ENST00000330188 LRRC2Q9BYS8 371 aa17.26■□□□□ 0.35
TPM3-206ENST00000330188 WNK3Q9BYP7 1800 aa17.26■□□□□ 0.35
TPM3-206ENST00000330188 RIC1Q4ADV7 1423 aa17.26■□□□□ 0.35
TPM3-206ENST00000330188 MYH3P11055 1940 aa17.26■□□□□ 0.35
TPM3-206ENST00000330188 M0R2C6 588 aa17.26■□□□□ 0.35
TPM3-206ENST00000330188 HSP90B1P14625 803 aaKnown RBP17.26■□□□□ 0.35
TPM3-206ENST00000330188 IFIT5Q13325 482 aaKnown RBP17.26■□□□□ 0.35
TPM3-206ENST00000330188 CCDC158Q5M9N0 1113 aa17.26■□□□□ 0.35
TPM3-206ENST00000330188 TTC39AQ5SRH9 613 aa17.26■□□□□ 0.35
TPM3-206ENST00000330188 FAM173BQ6P4H8 233 aa17.26■□□□□ 0.35
TPM3-206ENST00000330188 DHX32Q7L7V1 743 aaKnown RBP17.26■□□□□ 0.35
TPM3-206ENST00000330188 FAM184AQ8NB25 1140 aa17.26■□□□□ 0.35
TPM3-206ENST00000330188 ELP1O95163 1332 aa17.25■□□□□ 0.35
TPM3-206ENST00000330188 A0A0G2JLW4 131 aa17.25■□□□□ 0.35
TPM3-206ENST00000330188 CYP19A1P11511 503 aaPredicted RBP17.25■□□□□ 0.35
TPM3-206ENST00000330188 TAF7LQ5H9L4 462 aa17.25■□□□□ 0.35
TPM3-206ENST00000330188 NLRP10Q86W26 655 aa17.25■□□□□ 0.35
TPM3-206ENST00000330188 SYNE4Q8N205 404 aa17.25■□□□□ 0.35
TPM3-206ENST00000330188 COL16A1Q07092 1604 aaPredicted RBP17.25■□□□□ 0.35
TPM3-206ENST00000330188 NUP98P52948 1817 aa17.25■□□□□ 0.35
TPM3-206ENST00000330188 FKBP4Q02790 459 aaKnown RBP eCLIP17.24■□□□□ 0.35
TPM3-206ENST00000330188 SCRN1Q12765 414 aa17.24■□□□□ 0.35
TPM3-206ENST00000330188 KLHL34Q8N239 644 aa17.24■□□□□ 0.35
TPM3-206ENST00000330188 OSBP2Q969R2 916 aa17.24■□□□□ 0.35
TPM3-206ENST00000330188 AGXT2Q9BYV1 514 aa17.24■□□□□ 0.35
TPM3-206ENST00000330188 MYH7P12883 1935 aa17.24■□□□□ 0.35
TPM3-206ENST00000330188 NWD2Q9ULI1 1742 aa17.24■□□□□ 0.35
TPM3-206ENST00000330188 E7EWF7 191 aa17.24■□□□□ 0.35
TPM3-206ENST00000330188 PFKFB2O60825 505 aa17.24■□□□□ 0.35
TPM3-206ENST00000330188 GPTP24298 496 aa17.24■□□□□ 0.35
TPM3-206ENST00000330188 EXOSC10Q01780 885 aaKnown RBP17.24■□□□□ 0.35
TPM3-206ENST00000330188 UVSSAQ2YD98 709 aa17.24■□□□□ 0.35
TPM3-206ENST00000330188 GORABQ5T7V8 394 aa17.24■□□□□ 0.35
TPM3-206ENST00000330188 FUCA2Q9BTY2 467 aa17.24■□□□□ 0.35
TPM3-206ENST00000330188 NOL7Q9UMY1 257 aaKnown RBP17.24■□□□□ 0.35
TPM3-206ENST00000330188 MSNP26038 577 aaKnown RBP17.23■□□□□ 0.35
TPM3-206ENST00000330188 SCARF1Q14162 830 aa17.23■□□□□ 0.35
TPM3-206ENST00000330188 HSP90AB3PQ58FF7 597 aa17.23■□□□□ 0.35
TPM3-206ENST00000330188 SMARCC2Q8TAQ2 1214 aa17.23■□□□□ 0.35
TPM3-206ENST00000330188 FGD1P98174 961 aa17.23■□□□□ 0.35
TPM3-206ENST00000330188 LRRFIP1Q32MZ4 808 aaKnown RBP17.23■□□□□ 0.35
TPM3-206ENST00000330188 GIMAP6Q6P9H5 292 aa17.23■□□□□ 0.35
TPM3-206ENST00000330188 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.23■□□□□ 0.35
TPM3-206ENST00000330188 ZBTB1Q9Y2K1 713 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms