RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 TTLL11Q8NHH1 800 aa17.38■□□□□ 0.37
GTF3C6-201ENST00000329970 CDC5LQ99459 802 aaKnown RBP17.38■□□□□ 0.37
GTF3C6-201ENST00000329970 PLA2G12BQ9BX93 195 aa17.38■□□□□ 0.37
GTF3C6-201ENST00000329970 BCL2L13Q9BXK5 485 aa17.38■□□□□ 0.37
GTF3C6-201ENST00000329970 ZNF646O15015 1829 aaPredicted RBP17.37■□□□□ 0.37
GTF3C6-201ENST00000329970 CWF19L2Q2TBE0 894 aaKnown RBP17.37■□□□□ 0.37
GTF3C6-201ENST00000329970 DNAAF4Q8WXU2 420 aa17.37■□□□□ 0.37
GTF3C6-201ENST00000329970 DBNDD1Q9H9R9 158 aa17.37■□□□□ 0.37
GTF3C6-201ENST00000329970 GGA1Q9UJY5 639 aa17.37■□□□□ 0.37
GTF3C6-201ENST00000329970 XDHP47989 1333 aa17.37■□□□□ 0.37
GTF3C6-201ENST00000329970 H7C1D1 291 aa17.36■□□□□ 0.37
GTF3C6-201ENST00000329970 PSMD14O00487 310 aa17.36■□□□□ 0.37
GTF3C6-201ENST00000329970 ECE2O60344 883 aa17.36■□□□□ 0.37
GTF3C6-201ENST00000329970 EXOSC9Q06265 439 aaKnown RBP17.36■□□□□ 0.37
GTF3C6-201ENST00000329970 GCKRQ14397 625 aa17.36■□□□□ 0.37
GTF3C6-201ENST00000329970 LINS1Q8NG48 757 aa17.36■□□□□ 0.37
GTF3C6-201ENST00000329970 JARID2Q92833 1246 aaPredicted RBP17.36■□□□□ 0.37
GTF3C6-201ENST00000329970 ZC3H12CQ9C0D7 883 aaKnown RBP17.36■□□□□ 0.37
GTF3C6-201ENST00000329970 MYH16Q9H6N6 1097 aa17.36■□□□□ 0.37
GTF3C6-201ENST00000329970 BSDC1Q9NW68 430 aaPredicted RBP17.36■□□□□ 0.37
GTF3C6-201ENST00000329970 CNOT7Q9UIV1 285 aaKnown RBP17.36■□□□□ 0.37
GTF3C6-201ENST00000329970 A0A1B0GUL6 1792 aa17.35■□□□□ 0.37
GTF3C6-201ENST00000329970 RIMBP2O15034 1052 aa17.35■□□□□ 0.37
GTF3C6-201ENST00000329970 UFL1O94874 794 aa17.35■□□□□ 0.37
GTF3C6-201ENST00000329970 ATP2B4P23634 1241 aa17.35■□□□□ 0.37
GTF3C6-201ENST00000329970 VEGFBP49765 207 aa17.35■□□□□ 0.37
GTF3C6-201ENST00000329970 CASP7P55210 303 aa17.35■□□□□ 0.37
GTF3C6-201ENST00000329970 FKBP5Q13451 457 aaPredicted RBP17.35■□□□□ 0.37
GTF3C6-201ENST00000329970 DEFB115Q30KQ5 88 aa17.35■□□□□ 0.37
GTF3C6-201ENST00000329970 ANKIB1Q9P2G1 1089 aa17.35■□□□□ 0.37
GTF3C6-201ENST00000329970 VIL1P09327 827 aaKnown RBP17.34■□□□□ 0.37
GTF3C6-201ENST00000329970 HIRAP54198 1017 aaPredicted RBP17.34■□□□□ 0.37
GTF3C6-201ENST00000329970 MICALL2Q8IY33 904 aa17.34■□□□□ 0.37
GTF3C6-201ENST00000329970 ZNF521Q96K83 1311 aa17.34■□□□□ 0.37
GTF3C6-201ENST00000329970 SPINK5Q9NQ38 1064 aaPredicted RBP17.34■□□□□ 0.37
GTF3C6-201ENST00000329970 MED23Q9ULK4 1368 aa17.33■□□□□ 0.36
GTF3C6-201ENST00000329970 COL13A1Q5TAT6 717 aaPredicted RBP17.33■□□□□ 0.36
GTF3C6-201ENST00000329970 CST9Q5W186 159 aa17.33■□□□□ 0.36
GTF3C6-201ENST00000329970 UBE3BQ7Z3V4 1068 aa17.33■□□□□ 0.36
GTF3C6-201ENST00000329970 FAM9BQ8IZU0 186 aa17.33■□□□□ 0.36
GTF3C6-201ENST00000329970 TRPM4Q8TD43 1214 aa17.33■□□□□ 0.36
GTF3C6-201ENST00000329970 CCDC85AQ96PX6 553 aaPredicted RBP17.33■□□□□ 0.36
GTF3C6-201ENST00000329970 GREM2Q9H772 168 aa17.33■□□□□ 0.36
GTF3C6-201ENST00000329970 SALL2Q9Y467 1007 aaPredicted RBP17.33■□□□□ 0.36
GTF3C6-201ENST00000329970 CSF1RP07333 972 aa17.32■□□□□ 0.36
GTF3C6-201ENST00000329970 DOK7Q18PE1 504 aa17.32■□□□□ 0.36
GTF3C6-201ENST00000329970 CDC37L1Q7L3B6 337 aa17.32■□□□□ 0.36
GTF3C6-201ENST00000329970 ABT1Q9ULW3 272 aaKnown RBP17.32■□□□□ 0.36
GTF3C6-201ENST00000329970 MINPP1Q9UNW1 487 aa17.32■□□□□ 0.36
GTF3C6-201ENST00000329970 ZBTB12Q9Y330 459 aaPredicted RBP17.32■□□□□ 0.36
GTF3C6-201ENST00000329970 TLL2Q9Y6L7 1015 aa17.32■□□□□ 0.36
GTF3C6-201ENST00000329970 WDR33Q9C0J8 1336 aaKnown RBP17.31■□□□□ 0.36
GTF3C6-201ENST00000329970 TRAF5O00463 557 aa17.31■□□□□ 0.36
GTF3C6-201ENST00000329970 PODNQ7Z5L7 613 aa17.31■□□□□ 0.36
GTF3C6-201ENST00000329970 HHIPL1Q96JK4 782 aa17.31■□□□□ 0.36
GTF3C6-201ENST00000329970 GPR101Q96P66 508 aaPredicted RBP17.31■□□□□ 0.36
GTF3C6-201ENST00000329970 SHTN1A0MZ66 631 aa17.3■□□□□ 0.36
GTF3C6-201ENST00000329970 ECE1P42892 770 aa17.3■□□□□ 0.36
GTF3C6-201ENST00000329970 FMR1Q06787 632 aaKnown RBP eCLIP17.3■□□□□ 0.36
GTF3C6-201ENST00000329970 AGBL3Q8NEM8 1001 aa17.3■□□□□ 0.36
GTF3C6-201ENST00000329970 KCNQ5Q9NR82 932 aa17.3■□□□□ 0.36
GTF3C6-201ENST00000329970 WBP1LQ9NX94 342 aa17.3■□□□□ 0.36
GTF3C6-201ENST00000329970 G3V3G9 751 aa17.29■□□□□ 0.36
GTF3C6-201ENST00000329970 ITGA6P23229 1130 aa17.29■□□□□ 0.36
GTF3C6-201ENST00000329970 IGHMBP2P38935 993 aaKnown RBP17.29■□□□□ 0.36
GTF3C6-201ENST00000329970 CCT4P50991 539 aaKnown RBP17.29■□□□□ 0.36
GTF3C6-201ENST00000329970 BEND3Q5T5X7 828 aa17.29■□□□□ 0.36
GTF3C6-201ENST00000329970 DCAF8Q5TAQ9 597 aa17.29■□□□□ 0.36
GTF3C6-201ENST00000329970 GLIS2Q9BZE0 524 aaPredicted RBP17.29■□□□□ 0.36
GTF3C6-201ENST00000329970 LEMD3Q9Y2U8 911 aa17.29■□□□□ 0.36
GTF3C6-201ENST00000329970 ZNF280AP59817 542 aaPredicted RBP17.28■□□□□ 0.36
GTF3C6-201ENST00000329970 MAP2K1Q02750 393 aaPredicted RBP17.28■□□□□ 0.36
GTF3C6-201ENST00000329970 RSBN1LQ6PCB5 846 aaPredicted RBP17.28■□□□□ 0.36
GTF3C6-201ENST00000329970 SAMD7Q7Z3H4 446 aa17.28■□□□□ 0.36
GTF3C6-201ENST00000329970 SAPCD2Q86UD0 394 aa17.28■□□□□ 0.36
GTF3C6-201ENST00000329970 PRDM10Q9NQV6 1147 aa17.28■□□□□ 0.36
GTF3C6-201ENST00000329970 FOXN1O15353 648 aa17.27■□□□□ 0.36
GTF3C6-201ENST00000329970 CELF2O95319 508 aaKnown RBP17.27■□□□□ 0.36
GTF3C6-201ENST00000329970 FAM161AQ3B820 660 aa17.27■□□□□ 0.36
GTF3C6-201ENST00000329970 AIDAQ96BJ3 306 aa17.27■□□□□ 0.36
GTF3C6-201ENST00000329970 CAPNS2Q96L46 248 aa17.27■□□□□ 0.36
GTF3C6-201ENST00000329970 GMLQ99445 158 aa17.27■□□□□ 0.36
GTF3C6-201ENST00000329970 ANKRD2Q9GZV1 360 aa17.27■□□□□ 0.36
GTF3C6-201ENST00000329970 EGFRP00533 1210 aa17.26■□□□□ 0.35
GTF3C6-201ENST00000329970 CTCFP49711 727 aaPredicted RBP17.26■□□□□ 0.35
GTF3C6-201ENST00000329970 MMP14P50281 582 aa17.26■□□□□ 0.35
GTF3C6-201ENST00000329970 KIF4BQ2VIQ3 1234 aa17.26■□□□□ 0.35
GTF3C6-201ENST00000329970 TBC1D10BQ4KMP7 808 aaPredicted RBP17.26■□□□□ 0.35
GTF3C6-201ENST00000329970 COA1Q9GZY4 146 aa17.26■□□□□ 0.35
GTF3C6-201ENST00000329970 USP17L3A6NCW0 530 aa17.25■□□□□ 0.35
GTF3C6-201ENST00000329970 USP17L4A6NCW7 530 aa17.25■□□□□ 0.35
GTF3C6-201ENST00000329970 F6X3S4 739 aa17.25■□□□□ 0.35
GTF3C6-201ENST00000329970 ALDH1L1O75891 902 aa17.25■□□□□ 0.35
GTF3C6-201ENST00000329970 MAP2K2P36507 400 aa17.25■□□□□ 0.35
GTF3C6-201ENST00000329970 FOXO4P98177 505 aa17.25■□□□□ 0.35
GTF3C6-201ENST00000329970 USP17L1Q7RTZ2 530 aa17.25■□□□□ 0.35
GTF3C6-201ENST00000329970 MPHOSPH8Q99549 860 aa17.25■□□□□ 0.35
GTF3C6-201ENST00000329970 MYO3BQ8WXR4 1341 aa17.24■□□□□ 0.35
GTF3C6-201ENST00000329970 ANKRD18BA2A2Z9 1011 aa17.24■□□□□ 0.35
GTF3C6-201ENST00000329970 TNS4Q8IZW8 715 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms