RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 LEO1Q8WVC0 666 aaPredicted RBP23.51■■□□□ 1.35
SOX2-201ENST00000325404 SPATA32Q96LK8 384 aa23.51■■□□□ 1.35
SOX2-201ENST00000325404 ZSCAN16Q9H4T2 348 aaPredicted RBP23.51■■□□□ 1.35
SOX2-201ENST00000325404 SH3TC1Q8TE82 1336 aa23.5■■□□□ 1.35
SOX2-201ENST00000325404 GPR108Q9NPR9 543 aa23.5■■□□□ 1.35
SOX2-201ENST00000325404 PLBD2Q8NHP8 589 aa23.5■■□□□ 1.35
SOX2-201ENST00000325404 ZNF609O15014 1411 aa23.49■■□□□ 1.35
SOX2-201ENST00000325404 LIG1P18858 919 aa23.49■■□□□ 1.35
SOX2-201ENST00000325404 TYRO3Q06418 890 aa23.49■■□□□ 1.35
SOX2-201ENST00000325404 FERMT3Q86UX7 667 aa23.49■■□□□ 1.35
SOX2-201ENST00000325404 TTC12Q9H892 705 aaPredicted RBP23.49■■□□□ 1.35
SOX2-201ENST00000325404 GLI3P10071 1580 aa23.49■■□□□ 1.35
SOX2-201ENST00000325404 GOLGA6L4A6NEF3 574 aa23.49■■□□□ 1.35
SOX2-201ENST00000325404 CAVIN2O95810 425 aa23.49■■□□□ 1.35
SOX2-201ENST00000325404 CLSTN2Q9H4D0 955 aa23.49■■□□□ 1.35
SOX2-201ENST00000325404 MRVI1Q9Y6F6 885 aa23.49■■□□□ 1.35
SOX2-201ENST00000325404 DISP2A7MBM2 1401 aa23.48■■□□□ 1.35
SOX2-201ENST00000325404 ARFGEF2Q9Y6D5 1785 aa23.48■■□□□ 1.35
SOX2-201ENST00000325404 PALLDQ8WX93 1383 aa23.48■■□□□ 1.35
SOX2-201ENST00000325404 AFDNP55196 1824 aaKnown RBP23.48■■□□□ 1.35
SOX2-201ENST00000325404 GTF2F1P35269 517 aaKnown RBP eCLIP23.48■■□□□ 1.35
SOX2-201ENST00000325404 AP5Z1O43299 807 aa23.48■■□□□ 1.35
SOX2-201ENST00000325404 KBTBD3Q8NAB2 608 aa23.48■■□□□ 1.35
SOX2-201ENST00000325404 TCEANC2Q96MN5 208 aa23.48■■□□□ 1.35
SOX2-201ENST00000325404 TNMDQ9H2S6 317 aa23.48■■□□□ 1.35
SOX2-201ENST00000325404 PIP4K2BP78356 416 aa23.47■■□□□ 1.35
SOX2-201ENST00000325404 RESTQ13127 1097 aa23.47■■□□□ 1.35
SOX2-201ENST00000325404 UBE3BQ7Z3V4 1068 aa23.47■■□□□ 1.35
SOX2-201ENST00000325404 SMARCC2Q8TAQ2 1214 aa23.47■■□□□ 1.35
SOX2-201ENST00000325404 ZNF830Q96NB3 372 aaPredicted RBP23.47■■□□□ 1.35
SOX2-201ENST00000325404 HELLSQ9NRZ9 838 aa23.47■■□□□ 1.35
SOX2-201ENST00000325404 LAMB4A4D0S4 1761 aa23.47■■□□□ 1.35
SOX2-201ENST00000325404 KIAA1524Q8TCG1 905 aa23.47■■□□□ 1.35
SOX2-201ENST00000325404 EDC3Q96F86 508 aaKnown RBP23.47■■□□□ 1.35
SOX2-201ENST00000325404 A0A087WZG4 1122 aa23.46■■□□□ 1.35
SOX2-201ENST00000325404 ADAMTS2O95450 1211 aa23.46■■□□□ 1.35
SOX2-201ENST00000325404 DACT1Q9NYF0 836 aa23.46■■□□□ 1.35
SOX2-201ENST00000325404 TMOD3Q9NYL9 352 aa23.46■■□□□ 1.35
SOX2-201ENST00000325404 TPRNQ4KMQ1 711 aa23.46■■□□□ 1.35
SOX2-201ENST00000325404 DBNDD2Q9BQY9 259 aa23.46■■□□□ 1.35
SOX2-201ENST00000325404 CFAP45Q9UL16 551 aa23.46■■□□□ 1.35
SOX2-201ENST00000325404 H7C1W4 665 aa23.45■■□□□ 1.34
SOX2-201ENST00000325404 PFKFB2O60825 505 aa23.45■■□□□ 1.34
SOX2-201ENST00000325404 CYP21A2P08686 494 aa23.45■■□□□ 1.34
SOX2-201ENST00000325404 DNTTIP2Q5QJE6 756 aaKnown RBP23.45■■□□□ 1.34
SOX2-201ENST00000325404 Q6ZUG5 572 aa23.45■■□□□ 1.34
SOX2-201ENST00000325404 CHMP4CQ96CF2 233 aa23.45■■□□□ 1.34
SOX2-201ENST00000325404 UBR2Q8IWV8 1755 aa23.45■■□□□ 1.34
SOX2-201ENST00000325404 KCPQ6ZWJ8 1503 aa23.45■■□□□ 1.34
SOX2-201ENST00000325404 PAPPAQ13219 1627 aa23.45■■□□□ 1.34
SOX2-201ENST00000325404 FAM173BQ6P4H8 233 aa23.44■■□□□ 1.34
SOX2-201ENST00000325404 DSCC1Q9BVC3 393 aa23.44■■□□□ 1.34
SOX2-201ENST00000325404 FAM13BQ9NYF5 915 aa23.44■■□□□ 1.34
SOX2-201ENST00000325404 TNS2Q63HR2 1409 aa23.44■■□□□ 1.34
SOX2-201ENST00000325404 PIP4K2AP48426 406 aaPredicted RBP23.44■■□□□ 1.34
SOX2-201ENST00000325404 ATL3Q6DD88 541 aa23.44■■□□□ 1.34
SOX2-201ENST00000325404 NAA16Q6N069 864 aaPredicted RBP23.44■■□□□ 1.34
SOX2-201ENST00000325404 AGXT2Q9BYV1 514 aa23.44■■□□□ 1.34
SOX2-201ENST00000325404 DTNBO60941 627 aa23.43■■□□□ 1.34
SOX2-201ENST00000325404 PTCD1O75127 700 aaKnown RBP23.43■■□□□ 1.34
SOX2-201ENST00000325404 RBM10P98175 930 aaKnown RBP23.43■■□□□ 1.34
SOX2-201ENST00000325404 STK3Q13188 491 aa23.43■■□□□ 1.34
SOX2-201ENST00000325404 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.43■■□□□ 1.34
SOX2-201ENST00000325404 BRF1Q92994 677 aa23.43■■□□□ 1.34
SOX2-201ENST00000325404 KIF3AQ9Y496 699 aa23.43■■□□□ 1.34
SOX2-201ENST00000325404 TOGARAM1Q9Y4F4 1720 aa23.43■■□□□ 1.34
SOX2-201ENST00000325404 PLCH1Q4KWH8 1693 aa23.43■■□□□ 1.34
SOX2-201ENST00000325404 DHX32Q7L7V1 743 aaKnown RBP23.42■■□□□ 1.34
SOX2-201ENST00000325404 TDRD7Q8NHU6 1098 aaKnown RBP23.42■■□□□ 1.34
SOX2-201ENST00000325404 FOXO4P98177 505 aa23.42■■□□□ 1.34
SOX2-201ENST00000325404 DNAJC2Q99543 621 aaKnown RBP23.42■■□□□ 1.34
SOX2-201ENST00000325404 TFIP11Q9UBB9 837 aaKnown RBP23.42■■□□□ 1.34
SOX2-201ENST00000325404 JAK2O60674 1132 aa23.41■■□□□ 1.34
SOX2-201ENST00000325404 PGBD1Q96JS3 809 aa23.41■■□□□ 1.34
SOX2-201ENST00000325404 KCNF1Q9H3M0 494 aa23.41■■□□□ 1.34
SOX2-201ENST00000325404 EXOC5O00471 708 aa23.41■■□□□ 1.34
SOX2-201ENST00000325404 ATG3Q9NT62 314 aa23.41■■□□□ 1.34
SOX2-201ENST00000325404 H3BQV1 296 aa23.4■■□□□ 1.34
SOX2-201ENST00000325404 IL15P40933 162 aaPredicted RBP23.4■■□□□ 1.34
SOX2-201ENST00000325404 PLCB2Q00722 1185 aa23.4■■□□□ 1.34
SOX2-201ENST00000325404 IFFO2Q5TF58 517 aa23.4■■□□□ 1.34
SOX2-201ENST00000325404 LMBR1LQ6UX01 489 aa23.4■■□□□ 1.34
SOX2-201ENST00000325404 CBX8Q9HC52 389 aa23.4■■□□□ 1.34
SOX2-201ENST00000325404 SPEF2Q9C093 1822 aa23.4■■□□□ 1.34
SOX2-201ENST00000325404 CAMK4Q16566 473 aa23.4■■□□□ 1.34
SOX2-201ENST00000325404 ATG9AQ7Z3C6 839 aa23.4■■□□□ 1.34
SOX2-201ENST00000325404 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.4■■□□□ 1.34
SOX2-201ENST00000325404 NUTM2BA6NNL0 878 aaPredicted RBP23.39■■□□□ 1.34
SOX2-201ENST00000325404 NUTM2EB1AL46 878 aaPredicted RBP23.39■■□□□ 1.34
SOX2-201ENST00000325404 EXOSC10Q01780 885 aaKnown RBP23.39■■□□□ 1.34
SOX2-201ENST00000325404 SCRN1Q12765 414 aa23.39■■□□□ 1.34
SOX2-201ENST00000325404 ANO6Q4KMQ2 910 aa23.39■■□□□ 1.34
SOX2-201ENST00000325404 ZMYM1Q5SVZ6 1142 aa23.39■■□□□ 1.34
SOX2-201ENST00000325404 NUTM2AQ8IVF1 878 aaPredicted RBP23.39■■□□□ 1.34
SOX2-201ENST00000325404 FBXL16Q8N461 479 aa23.39■■□□□ 1.34
SOX2-201ENST00000325404 ATP5J2-PTCD1G3V325 749 aa23.39■■□□□ 1.33
SOX2-201ENST00000325404 CTAGE5O15320 804 aa23.39■■□□□ 1.33
SOX2-201ENST00000325404 HSP90B1P14625 803 aaKnown RBP23.39■■□□□ 1.33
SOX2-201ENST00000325404 CCDC129Q6ZRS4 1044 aa23.39■■□□□ 1.33
SOX2-201ENST00000325404 MPNDQ8N594 471 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms