RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 RXRBP28702 533 aa10.32□□□□□ -0.76
CD28-201ENST00000324106 PLS1Q14651 629 aa10.32□□□□□ -0.76
CD28-201ENST00000324106 SPA17Q15506 151 aa10.32□□□□□ -0.76
CD28-201ENST00000324106 NFKBIBQ15653 356 aa10.32□□□□□ -0.76
CD28-201ENST00000324106 APBB1IPQ7Z5R6 666 aaPredicted RBP10.32□□□□□ -0.76
CD28-201ENST00000324106 TBC1D22AQ8WUA7 517 aa10.32□□□□□ -0.76
CD28-201ENST00000324106 RBM25P49756 843 aaKnown RBP10.32□□□□□ -0.76
CD28-201ENST00000324106 TCIRG1Q13488 830 aa10.32□□□□□ -0.76
CD28-201ENST00000324106 RTN1Q16799 776 aa10.32□□□□□ -0.76
CD28-201ENST00000324106 FERMT1Q9BQL6 677 aa10.32□□□□□ -0.76
CD28-201ENST00000324106 STX6O43752 255 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 HIBADHP31937 336 aaKnown RBP10.31□□□□□ -0.76
CD28-201ENST00000324106 CFAP100Q494V2 611 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 FAM196AQ6ZSG2 479 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 FAM114A1Q8IWE2 563 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 SLC26A6Q9BXS9 759 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 TTC41PQ6P2S7 1318 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 TCOF1Q13428 1488 aaKnown RBP10.31□□□□□ -0.76
CD28-201ENST00000324106 ARAP3Q8WWN8 1544 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 EZRP15311 586 aaKnown RBP10.31□□□□□ -0.76
CD28-201ENST00000324106 LIG1P18858 919 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 TNFAIP1Q13829 316 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 CCDC184Q52MB2 194 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 CNNM3Q8NE01 707 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 NAP1L4Q99733 375 aaKnown RBP10.31□□□□□ -0.76
CD28-201ENST00000324106 ZRANB1Q9UGI0 708 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 RTL9Q8NET4 1388 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 ANKRD62A6NC57 917 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 KIAA1328Q86T90 577 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 NLGN1Q8N2Q7 840 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 MEIS3Q99687 375 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 QTRT2Q9H974 415 aaKnown RBP10.31□□□□□ -0.76
CD28-201ENST00000324106 PAG1Q9NWQ8 432 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 SAMD9Q5K651 1589 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 A0A1W2PP64 1363 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 BICD1Q96G01 975 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 ARHGEF10LQ9HCE6 1279 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 WWC3Q9ULE0 1092 aa10.31□□□□□ -0.76
CD28-201ENST00000324106 MAGI2Q86UL8 1455 aa10.3□□□□□ -0.76
CD28-201ENST00000324106 CCDC172P0C7W6 258 aa10.3□□□□□ -0.76
CD28-201ENST00000324106 ANAPC15P60006 121 aa10.3□□□□□ -0.76
CD28-201ENST00000324106 ARHGAP29Q52LW3 1261 aa10.3□□□□□ -0.76
CD28-201ENST00000324106 TEX11Q8IYF3 940 aa10.3□□□□□ -0.76
CD28-201ENST00000324106 FAM43AQ8N2R8 423 aa10.3□□□□□ -0.76
CD28-201ENST00000324106 GTPBP4Q9BZE4 634 aaKnown RBP10.3□□□□□ -0.76
CD28-201ENST00000324106 GNA11P29992 359 aa10.3□□□□□ -0.76
CD28-201ENST00000324106 CCT2P78371 535 aaKnown RBP10.3□□□□□ -0.76
CD28-201ENST00000324106 ARHGEF6Q15052 776 aa10.3□□□□□ -0.76
CD28-201ENST00000324106 CNKSR1Q969H4 720 aa10.3□□□□□ -0.76
CD28-201ENST00000324106 KLF18A0A0U1RQI7 1052 aa10.3□□□□□ -0.76
CD28-201ENST00000324106 RRP36Q96EU6 259 aaKnown RBP10.3□□□□□ -0.76
CD28-201ENST00000324106 GLT8D2Q9H1C3 349 aa10.3□□□□□ -0.76
CD28-201ENST00000324106 SLC52A2Q9HAB3 445 aa10.3□□□□□ -0.76
CD28-201ENST00000324106 CCDC40Q4G0X9 1142 aa10.3□□□□□ -0.76
CD28-201ENST00000324106 TMEM94Q12767 1356 aa10.29□□□□□ -0.76
CD28-201ENST00000324106 NAPAP54920 295 aa10.29□□□□□ -0.76
CD28-201ENST00000324106 PUM3Q15397 648 aaKnown RBP10.29□□□□□ -0.76
CD28-201ENST00000324106 PPM1FP49593 454 aaPredicted RBP10.29□□□□□ -0.76
CD28-201ENST00000324106 TCERG1LQ5VWI1 586 aa10.29□□□□□ -0.76
CD28-201ENST00000324106 ZSCAN16Q9H4T2 348 aaPredicted RBP10.29□□□□□ -0.76
CD28-201ENST00000324106 RMND1Q9NWS8 449 aa10.29□□□□□ -0.76
CD28-201ENST00000324106 HDAC1Q13547 482 aaPredicted RBP10.29□□□□□ -0.76
CD28-201ENST00000324106 KLHL10Q6JEL2 608 aa10.29□□□□□ -0.76
CD28-201ENST00000324106 C8orf58Q8NAV2 365 aa10.29□□□□□ -0.76
CD28-201ENST00000324106 EYA2O00167 538 aa10.28□□□□□ -0.76
CD28-201ENST00000324106 RNF113AO15541 343 aaKnown RBP10.28□□□□□ -0.76
CD28-201ENST00000324106 TTC22Q5TAA0 569 aa10.28□□□□□ -0.76
CD28-201ENST00000324106 METTL22Q9BUU2 404 aaPredicted RBP10.28□□□□□ -0.76
CD28-201ENST00000324106 IMPG2Q9BZV3 1241 aa10.28□□□□□ -0.76
CD28-201ENST00000324106 ZNF408Q9H9D4 720 aa10.28□□□□□ -0.76
CD28-201ENST00000324106 DDX19AQ9NUU7 478 aaKnown RBP10.28□□□□□ -0.76
CD28-201ENST00000324106 NOD1Q9Y239 953 aa10.28□□□□□ -0.76
CD28-201ENST00000324106 ERLIN1O75477 346 aa10.28□□□□□ -0.76
CD28-201ENST00000324106 HELBQ8NG08 1087 aaPredicted RBP10.28□□□□□ -0.76
CD28-201ENST00000324106 MTIF2P46199 727 aaKnown RBP10.28□□□□□ -0.76
CD28-201ENST00000324106 GUCY1B3Q02153 619 aa10.28□□□□□ -0.76
CD28-201ENST00000324106 USP48Q86UV5 1035 aa10.28□□□□□ -0.76
CD28-201ENST00000324106 CCDC97Q96F63 343 aaPredicted RBP10.28□□□□□ -0.76
CD28-201ENST00000324106 TCHPQ9BT92 498 aa10.28□□□□□ -0.76
CD28-201ENST00000324106 GPHNQ9NQX3 736 aaPredicted RBP10.28□□□□□ -0.76
CD28-201ENST00000324106 COL17A1Q9UMD9 1497 aaPredicted RBP10.28□□□□□ -0.76
CD28-201ENST00000324106 ARHGEF12Q9NZN5 1544 aa10.28□□□□□ -0.76
CD28-201ENST00000324106 HEATR3Q7Z4Q2 680 aa10.28□□□□□ -0.76
CD28-201ENST00000324106 ZNF710Q8N1W2 664 aa10.28□□□□□ -0.76
CD28-201ENST00000324106 MPNDQ8N594 471 aa10.28□□□□□ -0.76
CD28-201ENST00000324106 MRPL50Q8N5N7 158 aaKnown RBP10.28□□□□□ -0.76
CD28-201ENST00000324106 GBP2P32456 591 aaPredicted RBP10.27□□□□□ -0.76
CD28-201ENST00000324106 TRMT1LQ7Z2T5 733 aaKnown RBP10.27□□□□□ -0.76
CD28-201ENST00000324106 USO1O60763 962 aaKnown RBP10.27□□□□□ -0.77
CD28-201ENST00000324106 DKC1O60832 514 aaKnown RBP eCLIP10.27□□□□□ -0.77
CD28-201ENST00000324106 CA8P35219 290 aa10.27□□□□□ -0.77
CD28-201ENST00000324106 DLGAP5Q15398 846 aa10.27□□□□□ -0.77
CD28-201ENST00000324106 SLC4A8Q2Y0W8 1093 aa10.27□□□□□ -0.77
CD28-201ENST00000324106 CCDC102BQ68D86 513 aa10.27□□□□□ -0.77
CD28-201ENST00000324106 DNAJC10Q8IXB1 793 aa10.27□□□□□ -0.77
CD28-201ENST00000324106 BRF1Q92994 677 aa10.27□□□□□ -0.77
CD28-201ENST00000324106 LRRC45Q96CN5 670 aa10.27□□□□□ -0.77
CD28-201ENST00000324106 FAM89AQ96GI7 184 aa10.27□□□□□ -0.77
CD28-201ENST00000324106 SLC5A4Q9NY91 659 aa10.27□□□□□ -0.77
CD28-201ENST00000324106 BCS1LQ9Y276 419 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms