RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 ME3Q16798 604 aa14.36□□□□□ -0.11
NCL-201ENST00000322723 HELLSQ9NRZ9 838 aa14.36□□□□□ -0.11
NCL-201ENST00000322723 CYP46A1Q9Y6A2 500 aa14.36□□□□□ -0.11
NCL-201ENST00000322723 DDX49Q9Y6V7 483 aaKnown RBP14.36□□□□□ -0.11
NCL-201ENST00000322723 LY75O60449 1722 aa14.36□□□□□ -0.11
NCL-201ENST00000322723 NHSQ6T4R5 1651 aa14.36□□□□□ -0.11
NCL-201ENST00000322723 PDLIM2Q96JY6 352 aa14.36□□□□□ -0.11
NCL-201ENST00000322723 TPCN1Q9ULQ1 816 aa14.36□□□□□ -0.11
NCL-201ENST00000322723 ZMYM1Q5SVZ6 1142 aa14.35□□□□□ -0.11
NCL-201ENST00000322723 JAKMIP1Q96N16 626 aaKnown RBP14.35□□□□□ -0.11
NCL-201ENST00000322723 TMOD3Q9NYL9 352 aa14.35□□□□□ -0.11
NCL-201ENST00000322723 MTMR6Q9Y217 621 aa14.35□□□□□ -0.11
NCL-201ENST00000322723 COL4A1P02462 1669 aa14.35□□□□□ -0.11
NCL-201ENST00000322723 VGLL2Q8N8G2 317 aa14.35□□□□□ -0.11
NCL-201ENST00000322723 ZBTB38Q8NAP3 1195 aaPredicted RBP14.35□□□□□ -0.11
NCL-201ENST00000322723 TAF1LQ8IZX4 1826 aa14.35□□□□□ -0.11
NCL-201ENST00000322723 SYT1P21579 422 aa14.34□□□□□ -0.11
NCL-201ENST00000322723 GIGYF2Q6Y7W6 1299 aaKnown RBP14.34□□□□□ -0.11
NCL-201ENST00000322723 JARID2Q92833 1246 aaPredicted RBP14.34□□□□□ -0.11
NCL-201ENST00000322723 FSD1Q9BTV5 496 aa14.34□□□□□ -0.11
NCL-201ENST00000322723 DSCC1Q9BVC3 393 aa14.34□□□□□ -0.11
NCL-201ENST00000322723 PSMA5P28066 241 aa14.34□□□□□ -0.11
NCL-201ENST00000322723 CHAMP1Q96JM3 812 aa14.34□□□□□ -0.11
NCL-201ENST00000322723 ASAP1Q9ULH1 1129 aa14.34□□□□□ -0.11
NCL-201ENST00000322723 DLEC1Q9Y238 1755 aa14.34□□□□□ -0.11
NCL-201ENST00000322723 FOXP2O15409 715 aa14.33□□□□□ -0.11
NCL-201ENST00000322723 PRPF40AO75400 957 aaKnown RBP14.33□□□□□ -0.11
NCL-201ENST00000322723 F13A1P00488 732 aa14.33□□□□□ -0.11
NCL-201ENST00000322723 CPA1P15085 419 aa14.33□□□□□ -0.11
NCL-201ENST00000322723 MCMDC2Q4G0Z9 681 aa14.33□□□□□ -0.11
NCL-201ENST00000322723 LRSAM1Q6UWE0 723 aa14.33□□□□□ -0.11
NCL-201ENST00000322723 EDC3Q96F86 508 aaKnown RBP14.33□□□□□ -0.11
NCL-201ENST00000322723 ERVV-1B6SEH8 477 aa14.33□□□□□ -0.12
NCL-201ENST00000322723 RTL9Q8NET4 1388 aa14.33□□□□□ -0.12
NCL-201ENST00000322723 STX6O43752 255 aa14.33□□□□□ -0.12
NCL-201ENST00000322723 LRRC24Q50LG9 513 aa14.33□□□□□ -0.12
NCL-201ENST00000322723 THRAP3Q9Y2W1 955 aaKnown RBP14.33□□□□□ -0.12
NCL-201ENST00000322723 U3KPZ7 1027 aaPredicted RBP14.33□□□□□ -0.12
NCL-201ENST00000322723 ANKRD1Q15327 319 aa14.32□□□□□ -0.12
NCL-201ENST00000322723 BTG4Q9NY30 223 aa14.32□□□□□ -0.12
NCL-201ENST00000322723 KRT32Q14532 448 aa14.32□□□□□ -0.12
NCL-201ENST00000322723 DNAJC10Q8IXB1 793 aa14.32□□□□□ -0.12
NCL-201ENST00000322723 ZKSCAN1P17029 563 aaPredicted RBP14.32□□□□□ -0.12
NCL-201ENST00000322723 EVCP57679 992 aa14.32□□□□□ -0.12
NCL-201ENST00000322723 RNF20Q5VTR2 975 aa14.31□□□□□ -0.12
NCL-201ENST00000322723 AK7Q96M32 723 aa14.31□□□□□ -0.12
NCL-201ENST00000322723 RIPOR2Q9Y4F9 1068 aa14.31□□□□□ -0.12
NCL-201ENST00000322723 SBF2Q86WG5 1849 aa14.31□□□□□ -0.12
NCL-201ENST00000322723 EXOSC10Q01780 885 aaKnown RBP14.31□□□□□ -0.12
NCL-201ENST00000322723 PAG1Q9NWQ8 432 aa14.31□□□□□ -0.12
NCL-201ENST00000322723 SPATA31A1Q5TZJ5 1347 aa14.31□□□□□ -0.12
NCL-201ENST00000322723 NLRP10Q86W26 655 aa14.31□□□□□ -0.12
NCL-201ENST00000322723 CDCA7Q9BWT1 371 aaPredicted RBP14.31□□□□□ -0.12
NCL-201ENST00000322723 SALL1Q9NSC2 1324 aa14.31□□□□□ -0.12
NCL-201ENST00000322723 MAST2Q6P0Q8 1798 aa14.31□□□□□ -0.12
NCL-201ENST00000322723 ZNF34Q8IZ26 560 aa14.31□□□□□ -0.12
NCL-201ENST00000322723 ZBTB3Q9H5J0 574 aa14.31□□□□□ -0.12
NCL-201ENST00000322723 ELP1O95163 1332 aa14.31□□□□□ -0.12
NCL-201ENST00000322723 TPM2P07951 284 aa14.3□□□□□ -0.12
NCL-201ENST00000322723 CAVIN1Q6NZI2 390 aaKnown RBP14.3□□□□□ -0.12
NCL-201ENST00000322723 STOX1Q6ZVD7 989 aa14.3□□□□□ -0.12
NCL-201ENST00000322723 CYP21A2P08686 494 aa14.3□□□□□ -0.12
NCL-201ENST00000322723 PDE4CQ08493 712 aa14.3□□□□□ -0.12
NCL-201ENST00000322723 CCDC173Q0VFZ6 552 aa14.3□□□□□ -0.12
NCL-201ENST00000322723 USP48Q86UV5 1035 aa14.3□□□□□ -0.12
NCL-201ENST00000322723 SMARCC2Q8TAQ2 1214 aa14.3□□□□□ -0.12
NCL-201ENST00000322723 DDX54Q8TDD1 881 aaKnown RBP14.3□□□□□ -0.12
NCL-201ENST00000322723 RBSNQ9H1K0 784 aa14.3□□□□□ -0.12
NCL-201ENST00000322723 GJB2P29033 226 aa14.3□□□□□ -0.12
NCL-201ENST00000322723 FUCA2Q9BTY2 467 aa14.3□□□□□ -0.12
NCL-201ENST00000322723 CHGBP05060 677 aa14.29□□□□□ -0.12
NCL-201ENST00000322723 CLCN1P35523 988 aa14.29□□□□□ -0.12
NCL-201ENST00000322723 IL6STP40189 918 aaPredicted RBP14.29□□□□□ -0.12
NCL-201ENST00000322723 PUS3Q9BZE2 481 aaKnown RBP14.29□□□□□ -0.12
NCL-201ENST00000322723 PDCL3Q9H2J4 239 aa14.29□□□□□ -0.12
NCL-201ENST00000322723 STRN4Q9NRL3 753 aa14.29□□□□□ -0.12
NCL-201ENST00000322723 MAST3O60307 1309 aa14.29□□□□□ -0.12
NCL-201ENST00000322723 A0A1B0GUL7 405 aa14.29□□□□□ -0.12
NCL-201ENST00000322723 RGS22Q8NE09 1264 aa14.29□□□□□ -0.12
NCL-201ENST00000322723 BTAF1O14981 1849 aa14.29□□□□□ -0.12
NCL-201ENST00000322723 GTF3C6Q969F1 213 aa14.29□□□□□ -0.12
NCL-201ENST00000322723 RBM27Q9P2N5 1060 aaKnown RBP14.29□□□□□ -0.12
NCL-201ENST00000322723 GADD45BO75293 160 aaPredicted RBP14.28□□□□□ -0.12
NCL-201ENST00000322723 PRIM1P49642 420 aaKnown RBP14.28□□□□□ -0.12
NCL-201ENST00000322723 EVA1CP58658 441 aa14.28□□□□□ -0.12
NCL-201ENST00000322723 HS1BP3Q53T59 392 aa14.28□□□□□ -0.12
NCL-201ENST00000322723 HSP90AB3PQ58FF7 597 aa14.28□□□□□ -0.12
NCL-201ENST00000322723 BLOC1S2Q6QNY1 142 aa14.28□□□□□ -0.12
NCL-201ENST00000322723 STARD3NLO95772 234 aa14.28□□□□□ -0.12
NCL-201ENST00000322723 HLFQ16534 295 aa14.28□□□□□ -0.12
NCL-201ENST00000322723 TTLL11Q8NHH1 800 aa14.28□□□□□ -0.12
NCL-201ENST00000322723 UBN2Q6ZU65 1347 aa14.28□□□□□ -0.12
NCL-201ENST00000322723 RGL2O15211 777 aa14.28□□□□□ -0.12
NCL-201ENST00000322723 CCDC83Q8IWF9 413 aa14.28□□□□□ -0.12
NCL-201ENST00000322723 MPNDQ8N594 471 aa14.28□□□□□ -0.12
NCL-201ENST00000322723 ZNF594Q96JF6 807 aaPredicted RBP14.28□□□□□ -0.12
NCL-201ENST00000322723 SEC62Q99442 399 aaKnown RBP14.28□□□□□ -0.12
NCL-201ENST00000322723 SMC3Q9UQE7 1217 aa14.28□□□□□ -0.12
NCL-201ENST00000322723 WDR19Q8NEZ3 1342 aa14.27□□□□□ -0.12
NCL-201ENST00000322723 RNF113AO15541 343 aaKnown RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms