RNA–Protein interactions for RNA: ENST00000319170.9

RAPH1-202, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPH1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-202ENST00000319170 PRPHP41219 470 aa16.08■□□□□ 0.16
RAPH1-202ENST00000319170 KRT23Q9C075 422 aa16.08■□□□□ 0.16
RAPH1-202ENST00000319170 NESP48681 1621 aa16.08■□□□□ 0.16
RAPH1-202ENST00000319170 CFAP58Q5T655 872 aa16.08■□□□□ 0.16
RAPH1-202ENST00000319170 CCDC61Q9Y6R9 512 aa16.08■□□□□ 0.16
RAPH1-202ENST00000319170 ZSCAN22P10073 491 aaPredicted RBP16.07■□□□□ 0.16
RAPH1-202ENST00000319170 FLIIQ13045 1269 aa16.07■□□□□ 0.16
RAPH1-202ENST00000319170 USP37Q86T82 979 aa16.07■□□□□ 0.16
RAPH1-202ENST00000319170 CTAGE15A4D2H0 777 aa16.07■□□□□ 0.16
RAPH1-202ENST00000319170 ATP5J2-PTCD1G3V325 749 aa16.07■□□□□ 0.16
RAPH1-202ENST00000319170 CTAGE8P0CG41 777 aa16.07■□□□□ 0.16
RAPH1-202ENST00000319170 CTAGE6Q86UF2 777 aa16.07■□□□□ 0.16
RAPH1-202ENST00000319170 CTAGE4Q8IX94 777 aa16.07■□□□□ 0.16
RAPH1-202ENST00000319170 SMIM23A6NLE4 172 aa16.07■□□□□ 0.16
RAPH1-202ENST00000319170 LRSAM1Q6UWE0 723 aa16.07■□□□□ 0.16
RAPH1-202ENST00000319170 RTN1Q16799 776 aa16.07■□□□□ 0.16
RAPH1-202ENST00000319170 CCDC121Q6ZUS5 278 aa16.07■□□□□ 0.16
RAPH1-202ENST00000319170 NME9Q86XW9 330 aa16.06■□□□□ 0.16
RAPH1-202ENST00000319170 UBE3BQ7Z3V4 1068 aa16.06■□□□□ 0.16
RAPH1-202ENST00000319170 GOLGA1Q92805 767 aa16.06■□□□□ 0.16
RAPH1-202ENST00000319170 SMC6Q96SB8 1091 aa16.06■□□□□ 0.16
RAPH1-202ENST00000319170 SYT1P21579 422 aa16.06■□□□□ 0.16
RAPH1-202ENST00000319170 SPAG5Q96R06 1193 aa16.06■□□□□ 0.16
RAPH1-202ENST00000319170 AOPEPQ8N6M6 819 aa16.06■□□□□ 0.16
RAPH1-202ENST00000319170 KCNG4Q8TDN1 519 aa16.06■□□□□ 0.16
RAPH1-202ENST00000319170 ALG1Q9BT22 464 aa16.06■□□□□ 0.16
RAPH1-202ENST00000319170 NECAB1Q8N987 351 aa16.06■□□□□ 0.16
RAPH1-202ENST00000319170 ZBTB9Q96C00 473 aa16.06■□□□□ 0.16
RAPH1-202ENST00000319170 TPD52P55327 224 aaPredicted RBP16.06■□□□□ 0.16
RAPH1-202ENST00000319170 WDR70Q9NW82 654 aa16.06■□□□□ 0.16
RAPH1-202ENST00000319170 ATRIPQ8WXE1 791 aa16.06■□□□□ 0.16
RAPH1-202ENST00000319170 LRRC2Q9BYS8 371 aa16.05■□□□□ 0.16
RAPH1-202ENST00000319170 STX8Q9UNK0 236 aa16.05■□□□□ 0.16
RAPH1-202ENST00000319170 CTTNBP2Q8WZ74 1663 aa16.05■□□□□ 0.16
RAPH1-202ENST00000319170 RTL1A6NKG5 1358 aa16.05■□□□□ 0.16
RAPH1-202ENST00000319170 NDC80O14777 642 aa16.05■□□□□ 0.16
RAPH1-202ENST00000319170 NOL3O60936 208 aaKnown RBP16.05■□□□□ 0.16
RAPH1-202ENST00000319170 PLS1Q14651 629 aa16.05■□□□□ 0.16
RAPH1-202ENST00000319170 ASIC1P78348 528 aa16.05■□□□□ 0.16
RAPH1-202ENST00000319170 PPP1R42Q7Z4L9 355 aa16.05■□□□□ 0.16
RAPH1-202ENST00000319170 KLF18A0A0U1RQI7 1052 aa16.05■□□□□ 0.16
RAPH1-202ENST00000319170 SKILP12757 684 aa16.05■□□□□ 0.16
RAPH1-202ENST00000319170 ZNF622Q969S3 477 aaKnown RBP eCLIP16.05■□□□□ 0.16
RAPH1-202ENST00000319170 FAM212AQ96EL1 285 aa16.05■□□□□ 0.16
RAPH1-202ENST00000319170 MARCKSP29966 332 aaPredicted RBP16.05■□□□□ 0.16
RAPH1-202ENST00000319170 JARID2Q92833 1246 aaPredicted RBP16.05■□□□□ 0.16
RAPH1-202ENST00000319170 DNAI1Q9UI46 699 aa16.05■□□□□ 0.16
RAPH1-202ENST00000319170 ZBTB43O43298 467 aa16.05■□□□□ 0.16
RAPH1-202ENST00000319170 VTI1AQ96AJ9 217 aa16.05■□□□□ 0.16
RAPH1-202ENST00000319170 RAPGEF3O95398 923 aa16.04■□□□□ 0.16
RAPH1-202ENST00000319170 TACC1O75410 805 aa16.04■□□□□ 0.16
RAPH1-202ENST00000319170 UBXN1Q04323 297 aa16.04■□□□□ 0.16
RAPH1-202ENST00000319170 LDHAL6AQ6ZMR3 332 aa16.04■□□□□ 0.16
RAPH1-202ENST00000319170 USP48Q86UV5 1035 aa16.04■□□□□ 0.16
RAPH1-202ENST00000319170 CCDC77Q9BR77 488 aa16.04■□□□□ 0.16
RAPH1-202ENST00000319170 FAM13AO94988 1023 aa16.04■□□□□ 0.16
RAPH1-202ENST00000319170 TTC14Q96N46 770 aa16.04■□□□□ 0.16
RAPH1-202ENST00000319170 ATP2A1O14983 1001 aa16.04■□□□□ 0.16
RAPH1-202ENST00000319170 CCDC152Q4G0S7 254 aa16.04■□□□□ 0.16
RAPH1-202ENST00000319170 Q6ZUG5 572 aa16.04■□□□□ 0.16
RAPH1-202ENST00000319170 SH3BP5O60239 455 aa16.03■□□□□ 0.16
RAPH1-202ENST00000319170 LDHCP07864 332 aa16.03■□□□□ 0.16
RAPH1-202ENST00000319170 SLC4A4Q9Y6R1 1079 aa16.03■□□□□ 0.16
RAPH1-202ENST00000319170 CCDC114Q96M63 670 aa16.03■□□□□ 0.16
RAPH1-202ENST00000319170 MAK16Q9BXY0 300 aaKnown RBP16.03■□□□□ 0.16
RAPH1-202ENST00000319170 MAP3K9P80192 1104 aa16.03■□□□□ 0.16
RAPH1-202ENST00000319170 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.03■□□□□ 0.16
RAPH1-202ENST00000319170 V9GYY5 206 aaPredicted RBP16.03■□□□□ 0.16
RAPH1-202ENST00000319170 RFC4P35249 363 aa16.03■□□□□ 0.16
RAPH1-202ENST00000319170 LMBR1Q8WVP7 490 aa16.03■□□□□ 0.16
RAPH1-202ENST00000319170 NAPAP54920 295 aa16.03■□□□□ 0.16
RAPH1-202ENST00000319170 IMPG2Q9BZV3 1241 aa16.03■□□□□ 0.16
RAPH1-202ENST00000319170 TSGA10Q9BZW7 698 aa16.03■□□□□ 0.16
RAPH1-202ENST00000319170 BMP2KLQ5H9B9 411 aa16.02■□□□□ 0.16
RAPH1-202ENST00000319170 CCDC25Q86WR0 208 aa16.02■□□□□ 0.16
RAPH1-202ENST00000319170 CNNM2Q9H8M5 875 aa16.02■□□□□ 0.16
RAPH1-202ENST00000319170 TTC21BQ7Z4L5 1316 aa16.02■□□□□ 0.16
RAPH1-202ENST00000319170 VPS18Q9P253 973 aa16.02■□□□□ 0.16
RAPH1-202ENST00000319170 IFT81Q8WYA0 676 aa16.02■□□□□ 0.16
RAPH1-202ENST00000319170 DHX29Q7Z478 1369 aaKnown RBP16.02■□□□□ 0.16
RAPH1-202ENST00000319170 PPP1R7Q15435 360 aa16.02■□□□□ 0.15
RAPH1-202ENST00000319170 CFAP157Q5JU67 520 aa16.02■□□□□ 0.15
RAPH1-202ENST00000319170 MICALL1Q8N3F8 863 aa16.02■□□□□ 0.15
RAPH1-202ENST00000319170 EMILIN1Q9Y6C2 1016 aa16.02■□□□□ 0.15
RAPH1-202ENST00000319170 C11orf95C9JLR9 678 aaPredicted RBP16.02■□□□□ 0.15
RAPH1-202ENST00000319170 NBPF7P0C2Y1 421 aaPredicted RBP16.02■□□□□ 0.15
RAPH1-202ENST00000319170 SMC1BQ8NDV3 1235 aa16.02■□□□□ 0.15
RAPH1-202ENST00000319170 BMP15O95972 392 aa16.02■□□□□ 0.15
RAPH1-202ENST00000319170 CEP57Q86XR8 500 aa16.02■□□□□ 0.15
RAPH1-202ENST00000319170 SEC62Q99442 399 aaKnown RBP16.02■□□□□ 0.15
RAPH1-202ENST00000319170 KRT2P35908 639 aa16.01■□□□□ 0.15
RAPH1-202ENST00000319170 DNAJC21Q5F1R6 531 aaKnown RBP16.01■□□□□ 0.15
RAPH1-202ENST00000319170 NBPF6Q5VWK0 638 aa16.01■□□□□ 0.15
RAPH1-202ENST00000319170 NBPF5PQ86XG9 351 aaPredicted RBP16.01■□□□□ 0.15
RAPH1-202ENST00000319170 NBPF4Q96M43 638 aa16.01■□□□□ 0.15
RAPH1-202ENST00000319170 IFT140Q96RY7 1462 aa16.01■□□□□ 0.15
RAPH1-202ENST00000319170 PICALMQ13492 652 aa16.01■□□□□ 0.15
RAPH1-202ENST00000319170 F8W031 263 aaPredicted RBP16.01■□□□□ 0.15
RAPH1-202ENST00000319170 PSMA7O14818 248 aa16.01■□□□□ 0.15
RAPH1-202ENST00000319170 AKNAD1Q5T1N1 836 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms