RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 CCDC171Q6TFL3 1326 aa15.9■□□□□ 0.14
EDEM3-201ENST00000318130 KCNA6P17658 529 aa15.9■□□□□ 0.14
EDEM3-201ENST00000318130 THOC2Q8NI27 1593 aaKnown RBP15.89■□□□□ 0.13
EDEM3-201ENST00000318130 RGS22Q8NE09 1264 aa15.89■□□□□ 0.13
EDEM3-201ENST00000318130 ATF5Q9Y2D1 282 aaPredicted RBP15.89■□□□□ 0.13
EDEM3-201ENST00000318130 TCERG1LQ5VWI1 586 aa15.89■□□□□ 0.13
EDEM3-201ENST00000318130 CRNKL1Q9BZJ0 848 aaKnown RBP15.89■□□□□ 0.13
EDEM3-201ENST00000318130 MBIPQ9NS73 344 aa15.89■□□□□ 0.13
EDEM3-201ENST00000318130 CCDC194A0A1B0GVG4 234 aa15.89■□□□□ 0.13
EDEM3-201ENST00000318130 GSTTP1A0A1W2PQM5 241 aa15.89■□□□□ 0.13
EDEM3-201ENST00000318130 UFL1O94874 794 aa15.89■□□□□ 0.13
EDEM3-201ENST00000318130 MFSD6Q6ZSS7 791 aa15.89■□□□□ 0.13
EDEM3-201ENST00000318130 ZKSCAN5Q9Y2L8 839 aa15.89■□□□□ 0.13
EDEM3-201ENST00000318130 RFX1P22670 979 aa15.89■□□□□ 0.13
EDEM3-201ENST00000318130 PDE4BQ07343 736 aa15.89■□□□□ 0.13
EDEM3-201ENST00000318130 CCDC186Q7Z3E2 898 aa15.89■□□□□ 0.13
EDEM3-201ENST00000318130 MAATS1Q7Z4T9 603 aa15.89■□□□□ 0.13
EDEM3-201ENST00000318130 UBE4AQ14139 1066 aa15.88■□□□□ 0.13
EDEM3-201ENST00000318130 MAGEB6Q8N7X4 407 aa15.88■□□□□ 0.13
EDEM3-201ENST00000318130 GINS2Q9Y248 185 aa15.88■□□□□ 0.13
EDEM3-201ENST00000318130 GCOM1H8Y6P7 765 aaPredicted RBP15.88■□□□□ 0.13
EDEM3-201ENST00000318130 HMGB1P09429 215 aaKnown RBP15.88■□□□□ 0.13
EDEM3-201ENST00000318130 MYZAPP0CAP1 466 aa15.88■□□□□ 0.13
EDEM3-201ENST00000318130 GTF2A1P52655 376 aaPredicted RBP15.88■□□□□ 0.13
EDEM3-201ENST00000318130 PRIM1P49642 420 aaKnown RBP15.88■□□□□ 0.13
EDEM3-201ENST00000318130 BBXQ8WY36 941 aaPredicted RBP15.88■□□□□ 0.13
EDEM3-201ENST00000318130 TSG101Q99816 390 aa15.88■□□□□ 0.13
EDEM3-201ENST00000318130 TRIM37O94972 964 aa15.88■□□□□ 0.13
EDEM3-201ENST00000318130 ZKSCAN3Q9BRR0 538 aa15.88■□□□□ 0.13
EDEM3-201ENST00000318130 TEX13AQ9BXU3 409 aaPredicted RBP15.88■□□□□ 0.13
EDEM3-201ENST00000318130 RSPH14Q9UHP6 348 aa15.87■□□□□ 0.13
EDEM3-201ENST00000318130 SKILP12757 684 aa15.87■□□□□ 0.13
EDEM3-201ENST00000318130 TMX3Q96JJ7 454 aa15.87■□□□□ 0.13
EDEM3-201ENST00000318130 RNF216Q9NWF9 866 aaPredicted RBP15.87■□□□□ 0.13
EDEM3-201ENST00000318130 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.87■□□□□ 0.13
EDEM3-201ENST00000318130 V9GYY5 206 aaPredicted RBP15.87■□□□□ 0.13
EDEM3-201ENST00000318130 TTC12Q9H892 705 aaPredicted RBP15.87■□□□□ 0.13
EDEM3-201ENST00000318130 UNC13AQ9UPW8 1703 aa15.87■□□□□ 0.13
EDEM3-201ENST00000318130 ALS2CR12Q96Q35 445 aa15.87■□□□□ 0.13
EDEM3-201ENST00000318130 PPP1R12BO60237 982 aaPredicted RBP15.87■□□□□ 0.13
EDEM3-201ENST00000318130 VPS36Q86VN1 386 aa15.87■□□□□ 0.13
EDEM3-201ENST00000318130 HOMER2Q9NSB8 354 aa15.87■□□□□ 0.13
EDEM3-201ENST00000318130 IRS4O14654 1257 aaPredicted RBP15.87■□□□□ 0.13
EDEM3-201ENST00000318130 TMEM266Q2M3C6 531 aa15.87■□□□□ 0.13
EDEM3-201ENST00000318130 NAA16Q6N069 864 aaPredicted RBP15.87■□□□□ 0.13
EDEM3-201ENST00000318130 CUL7Q14999 1698 aa15.86■□□□□ 0.13
EDEM3-201ENST00000318130 ATP2C2O75185 946 aa15.86■□□□□ 0.13
EDEM3-201ENST00000318130 GSTO1P78417 241 aa15.86■□□□□ 0.13
EDEM3-201ENST00000318130 TTC22Q5TAA0 569 aa15.86■□□□□ 0.13
EDEM3-201ENST00000318130 TPTE2Q6XPS3 522 aa15.86■□□□□ 0.13
EDEM3-201ENST00000318130 CNBD1Q8NA66 436 aa15.86■□□□□ 0.13
EDEM3-201ENST00000318130 NAA15Q9BXJ9 866 aaKnown RBP15.86■□□□□ 0.13
EDEM3-201ENST00000318130 NYXQ9GZU5 481 aa15.86■□□□□ 0.13
EDEM3-201ENST00000318130 QTRT2Q9H974 415 aaKnown RBP15.86■□□□□ 0.13
EDEM3-201ENST00000318130 CNPY2Q9Y2B0 182 aa15.86■□□□□ 0.13
EDEM3-201ENST00000318130 CWF19L2Q2TBE0 894 aaKnown RBP15.86■□□□□ 0.13
EDEM3-201ENST00000318130 LARGE2Q8N3Y3 721 aa15.86■□□□□ 0.13
EDEM3-201ENST00000318130 KDM5BQ9UGL1 1544 aa15.86■□□□□ 0.13
EDEM3-201ENST00000318130 IDEP14735 1019 aa15.86■□□□□ 0.13
EDEM3-201ENST00000318130 ANO6Q4KMQ2 910 aa15.86■□□□□ 0.13
EDEM3-201ENST00000318130 SPOUT1Q5T280 376 aaKnown RBP15.86■□□□□ 0.13
EDEM3-201ENST00000318130 MPHOSPH6Q99547 160 aaKnown RBP15.86■□□□□ 0.13
EDEM3-201ENST00000318130 DNAI1Q9UI46 699 aa15.86■□□□□ 0.13
EDEM3-201ENST00000318130 CETN2P41208 172 aa15.86■□□□□ 0.13
EDEM3-201ENST00000318130 JADE2Q9NQC1 790 aa15.86■□□□□ 0.13
EDEM3-201ENST00000318130 KIF21AQ7Z4S6 1674 aa15.86■□□□□ 0.13
EDEM3-201ENST00000318130 RXRAP19793 462 aa15.86■□□□□ 0.13
EDEM3-201ENST00000318130 PHAXQ9H814 394 aaKnown RBP15.86■□□□□ 0.13
EDEM3-201ENST00000318130 TEX14Q8IWB6 1497 aa15.86■□□□□ 0.13
EDEM3-201ENST00000318130 ABCC11Q96J66 1382 aa15.86■□□□□ 0.13
EDEM3-201ENST00000318130 ZSCAN22P10073 491 aaPredicted RBP15.85■□□□□ 0.13
EDEM3-201ENST00000318130 HMGB2P26583 209 aaKnown RBP15.85■□□□□ 0.13
EDEM3-201ENST00000318130 IGSF3O75054 1194 aa15.85■□□□□ 0.13
EDEM3-201ENST00000318130 IFIT1BQ5T764 474 aaKnown RBP15.85■□□□□ 0.13
EDEM3-201ENST00000318130 H0YIN7 160 aa15.85■□□□□ 0.13
EDEM3-201ENST00000318130 ATXN8OSP0DMR3 200 aa15.85■□□□□ 0.13
EDEM3-201ENST00000318130 CCDC94Q9BW85 323 aaPredicted RBP15.85■□□□□ 0.13
EDEM3-201ENST00000318130 CAVIN2O95810 425 aa15.85■□□□□ 0.13
EDEM3-201ENST00000318130 KRT24Q2M2I5 525 aa15.85■□□□□ 0.13
EDEM3-201ENST00000318130 USP48Q86UV5 1035 aa15.85■□□□□ 0.13
EDEM3-201ENST00000318130 HMGXB3Q12766 1538 aa15.85■□□□□ 0.13
EDEM3-201ENST00000318130 MAGEB6P1A0A0J9YX57 407 aa15.85■□□□□ 0.13
EDEM3-201ENST00000318130 MTIF2P46199 727 aaKnown RBP15.85■□□□□ 0.13
EDEM3-201ENST00000318130 ARFGAP3Q9NP61 516 aa15.85■□□□□ 0.13
EDEM3-201ENST00000318130 NOD1Q9Y239 953 aa15.85■□□□□ 0.13
EDEM3-201ENST00000318130 CNGA1P29973 690 aa15.85■□□□□ 0.13
EDEM3-201ENST00000318130 PLIN2Q99541 437 aa15.85■□□□□ 0.13
EDEM3-201ENST00000318130 PICK1Q9NRD5 415 aa15.85■□□□□ 0.13
EDEM3-201ENST00000318130 CCDC196A0A1B0GTZ2 297 aa15.84■□□□□ 0.13
EDEM3-201ENST00000318130 TMCO5BA8MYB1 307 aa15.84■□□□□ 0.13
EDEM3-201ENST00000318130 HARSP12081 509 aaKnown RBP15.84■□□□□ 0.13
EDEM3-201ENST00000318130 MCM6Q14566 821 aa15.84■□□□□ 0.13
EDEM3-201ENST00000318130 TCEANC2Q96MN5 208 aa15.84■□□□□ 0.13
EDEM3-201ENST00000318130 DHX29Q7Z478 1369 aaKnown RBP15.84■□□□□ 0.13
EDEM3-201ENST00000318130 PRC1O43663 620 aa15.84■□□□□ 0.13
EDEM3-201ENST00000318130 LDHCP07864 332 aa15.84■□□□□ 0.13
EDEM3-201ENST00000318130 POTEJP0CG39 1038 aa15.84■□□□□ 0.13
EDEM3-201ENST00000318130 SYCP2Q9BX26 1530 aa15.84■□□□□ 0.13
EDEM3-201ENST00000318130 MRPS9P82933 396 aaKnown RBP15.84■□□□□ 0.13
EDEM3-201ENST00000318130 LMBR1LQ6UX01 489 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms