RNA–Protein interactions for RNA: ENST00000312912.9

KDM3A-201, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-201ENST00000312912 COPS6Q7L5N1 327 aa17.57■□□□□ 0.4
KDM3A-201ENST00000312912 XAGE3Q8WTP9 111 aa17.57■□□□□ 0.4
KDM3A-201ENST00000312912 CARD14Q9BXL6 1004 aa17.57■□□□□ 0.4
KDM3A-201ENST00000312912 TSPYL6Q8N831 410 aa17.56■□□□□ 0.4
KDM3A-201ENST00000312912 EHBP1Q8NDI1 1231 aa17.56■□□□□ 0.4
KDM3A-201ENST00000312912 ALG1Q9BT22 464 aa17.56■□□□□ 0.4
KDM3A-201ENST00000312912 KRT23Q9C075 422 aa17.56■□□□□ 0.4
KDM3A-201ENST00000312912 TSPY2A6NKD2 308 aa17.56■□□□□ 0.4
KDM3A-201ENST00000312912 CCDC144CPQ8IYA2 1237 aa17.56■□□□□ 0.4
KDM3A-201ENST00000312912 PAF1Q8N7H5 531 aa17.56■□□□□ 0.4
KDM3A-201ENST00000312912 WTAPQ15007 396 aa17.55■□□□□ 0.4
KDM3A-201ENST00000312912 ISM2Q6H9L7 571 aa17.55■□□□□ 0.4
KDM3A-201ENST00000312912 RMND1Q9NWS8 449 aa17.55■□□□□ 0.4
KDM3A-201ENST00000312912 AKAP4Q5JQC9 854 aa17.55■□□□□ 0.4
KDM3A-201ENST00000312912 CNNM2Q9H8M5 875 aa17.55■□□□□ 0.4
KDM3A-201ENST00000312912 SOS1Q07889 1333 aaPredicted RBP17.55■□□□□ 0.4
KDM3A-201ENST00000312912 CCDC96Q2M329 555 aa17.55■□□□□ 0.4
KDM3A-201ENST00000312912 NPC1L1Q9UHC9 1359 aa17.55■□□□□ 0.4
KDM3A-201ENST00000312912 BAG3O95817 575 aa17.55■□□□□ 0.4
KDM3A-201ENST00000312912 HSPA2P54652 639 aa17.55■□□□□ 0.4
KDM3A-201ENST00000312912 LMBR1LQ6UX01 489 aa17.55■□□□□ 0.4
KDM3A-201ENST00000312912 CTAGE1Q96RT6 745 aa17.55■□□□□ 0.4
KDM3A-201ENST00000312912 USP26Q9BXU7 913 aa17.55■□□□□ 0.4
KDM3A-201ENST00000312912 LRRC27Q9C0I9 530 aa17.55■□□□□ 0.4
KDM3A-201ENST00000312912 UBA5Q9GZZ9 404 aa17.55■□□□□ 0.4
KDM3A-201ENST00000312912 TCOF1Q13428 1488 aaKnown RBP17.55■□□□□ 0.4
KDM3A-201ENST00000312912 SEC24BO95487 1268 aa17.54■□□□□ 0.4
KDM3A-201ENST00000312912 IFFO1Q0D2I5 559 aa17.54■□□□□ 0.4
KDM3A-201ENST00000312912 CETN1Q12798 172 aa17.54■□□□□ 0.4
KDM3A-201ENST00000312912 Q6ZUG5 572 aa17.54■□□□□ 0.4
KDM3A-201ENST00000312912 ZNF830Q96NB3 372 aaPredicted RBP17.54■□□□□ 0.4
KDM3A-201ENST00000312912 PPFIA3O75145 1194 aa17.54■□□□□ 0.4
KDM3A-201ENST00000312912 CAPN2P17655 700 aa17.54■□□□□ 0.4
KDM3A-201ENST00000312912 ATP2B3Q16720 1220 aa17.54■□□□□ 0.4
KDM3A-201ENST00000312912 CCDC40Q4G0X9 1142 aa17.54■□□□□ 0.4
KDM3A-201ENST00000312912 MYRIPQ8NFW9 859 aa17.54■□□□□ 0.4
KDM3A-201ENST00000312912 LRRC2Q9BYS8 371 aa17.54■□□□□ 0.4
KDM3A-201ENST00000312912 KAT14Q9H8E8 782 aa17.54■□□□□ 0.4
KDM3A-201ENST00000312912 ARFGAP3Q9NP61 516 aa17.54■□□□□ 0.4
KDM3A-201ENST00000312912 RAPGEF6Q8TEU7 1601 aa17.54■□□□□ 0.4
KDM3A-201ENST00000312912 CHMLP26374 656 aa17.54■□□□□ 0.4
KDM3A-201ENST00000312912 SPTY2D1Q68D10 685 aaPredicted RBP17.54■□□□□ 0.4
KDM3A-201ENST00000312912 TYRO3Q06418 890 aa17.53■□□□□ 0.4
KDM3A-201ENST00000312912 RAB11FIP4Q86YS3 637 aa17.53■□□□□ 0.4
KDM3A-201ENST00000312912 V9GYY5 206 aaPredicted RBP17.53■□□□□ 0.4
KDM3A-201ENST00000312912 ARHGEF12Q9NZN5 1544 aa17.53■□□□□ 0.4
KDM3A-201ENST00000312912 AK2P54819 239 aa17.53■□□□□ 0.4
KDM3A-201ENST00000312912 SPECC1Q5M775 1068 aa17.53■□□□□ 0.4
KDM3A-201ENST00000312912 CUL5Q93034 780 aa17.53■□□□□ 0.4
KDM3A-201ENST00000312912 DRC1Q96MC2 740 aa17.53■□□□□ 0.4
KDM3A-201ENST00000312912 TTC12Q9H892 705 aaPredicted RBP17.53■□□□□ 0.4
KDM3A-201ENST00000312912 DNAJC25Q9H1X3 360 aa17.53■□□□□ 0.4
KDM3A-201ENST00000312912 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.53■□□□□ 0.45e-7■■□□□ 14.4
KDM3A-201ENST00000312912 A0A1B0GUA9 196 aa17.53■□□□□ 0.4
KDM3A-201ENST00000312912 ZBTB7BO15156 539 aaPredicted RBP17.53■□□□□ 0.4
KDM3A-201ENST00000312912 CCDC178Q5BJE1 867 aa17.53■□□□□ 0.4
KDM3A-201ENST00000312912 ESR2Q92731 530 aa17.53■□□□□ 0.4
KDM3A-201ENST00000312912 SRRTQ9BXP5 876 aaKnown RBP17.53■□□□□ 0.4
KDM3A-201ENST00000312912 ADAMTS12P58397 1594 aa17.52■□□□□ 0.4
KDM3A-201ENST00000312912 MTHFSDQ2M296 383 aaKnown RBP17.52■□□□□ 0.4
KDM3A-201ENST00000312912 JARID2Q92833 1246 aaPredicted RBP17.52■□□□□ 0.4
KDM3A-201ENST00000312912 PPIP5K1Q6PFW1 1433 aa17.52■□□□□ 0.4
KDM3A-201ENST00000312912 EIF4G3O43432 1585 aaKnown RBP17.52■□□□□ 0.4
KDM3A-201ENST00000312912 RAD50Q92878 1312 aa17.52■□□□□ 0.4
KDM3A-201ENST00000312912 AKR1B10O60218 316 aa17.52■□□□□ 0.39
KDM3A-201ENST00000312912 NMIQ13287 307 aaPredicted RBP17.52■□□□□ 0.39
KDM3A-201ENST00000312912 ZGPATQ8N5A5 531 aaKnown RBP17.52■□□□□ 0.39
KDM3A-201ENST00000312912 ZNF622Q969S3 477 aaKnown RBP eCLIP17.52■□□□□ 0.391e-7■□□□□ 8.8
KDM3A-201ENST00000312912 NUP153P49790 1475 aaKnown RBP17.52■□□□□ 0.39
KDM3A-201ENST00000312912 GOLGA6L10A0A0M3HER8 536 aa17.52■□□□□ 0.39
KDM3A-201ENST00000312912 SPTLC2O15270 562 aa17.52■□□□□ 0.39
KDM3A-201ENST00000312912 MAP2K1Q02750 393 aaPredicted RBP17.52■□□□□ 0.39
KDM3A-201ENST00000312912 HLTFQ14527 1009 aaKnown RBP eCLIP17.52■□□□□ 0.39
KDM3A-201ENST00000312912 SLU7O95391 586 aaKnown RBP17.51■□□□□ 0.39
KDM3A-201ENST00000312912 MATR3P43243 847 aaKnown RBP eCLIP17.51■□□□□ 0.39
KDM3A-201ENST00000312912 PHACTR3Q96KR7 559 aa17.51■□□□□ 0.39
KDM3A-201ENST00000312912 TRIM47Q96LD4 638 aa17.51■□□□□ 0.39
KDM3A-201ENST00000312912 C19orf44Q9H6X5 657 aa17.51■□□□□ 0.39
KDM3A-201ENST00000312912 FLT4P35916 1363 aa17.51■□□□□ 0.39
KDM3A-201ENST00000312912 RTN1Q16799 776 aa17.51■□□□□ 0.39
KDM3A-201ENST00000312912 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.51■□□□□ 0.39
KDM3A-201ENST00000312912 DNAI1Q9UI46 699 aa17.51■□□□□ 0.39
KDM3A-201ENST00000312912 CRNKL1Q9BZJ0 848 aaKnown RBP17.51■□□□□ 0.39
KDM3A-201ENST00000312912 TAOK3Q9H2K8 898 aa17.51■□□□□ 0.39
KDM3A-201ENST00000312912 ZFYVE9O95405 1425 aa17.51■□□□□ 0.39
KDM3A-201ENST00000312912 LMTK3Q96Q04 1460 aa17.51■□□□□ 0.39
KDM3A-201ENST00000312912 DNA2P51530 1060 aa17.5■□□□□ 0.39
KDM3A-201ENST00000312912 AOPEPQ8N6M6 819 aa17.5■□□□□ 0.39
KDM3A-201ENST00000312912 GSTTP1A0A1W2PQM5 241 aa17.5■□□□□ 0.39
KDM3A-201ENST00000312912 CYLC1P35663 651 aaPredicted RBP17.5■□□□□ 0.39
KDM3A-201ENST00000312912 GNAQP50148 359 aa17.5■□□□□ 0.39
KDM3A-201ENST00000312912 CREB3L3Q68CJ9 461 aa17.5■□□□□ 0.39
KDM3A-201ENST00000312912 CCDC113Q9H0I3 377 aa17.5■□□□□ 0.39
KDM3A-201ENST00000312912 TMX1Q9H3N1 280 aa17.5■□□□□ 0.39
KDM3A-201ENST00000312912 UHRF1BP1Q6BDS2 1440 aa17.5■□□□□ 0.39
KDM3A-201ENST00000312912 KRBA2Q6ZNG9 492 aa17.5■□□□□ 0.39
KDM3A-201ENST00000312912 TRIM21P19474 475 aaKnown RBP17.49■□□□□ 0.39
KDM3A-201ENST00000312912 STXBP4Q6ZWJ1 553 aa17.49■□□□□ 0.39
KDM3A-201ENST00000312912 U2AF2P26368 475 aaKnown RBP eCLIP17.49■□□□□ 0.395e-7■■■□□ 16.1
KDM3A-201ENST00000312912 TCERG1LQ5VWI1 586 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms