RNA–Protein interactions for RNA: ENST00000312295.4

RTP1-201, Transcript of receptor transporter protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1-201ENST00000312295 ATP2B3Q16720 1220 aa18.35■□□□□ 0.53
RTP1-201ENST00000312295 SLFNL1Q499Z3 407 aa18.35■□□□□ 0.53
RTP1-201ENST00000312295 GPR108Q9NPR9 543 aa18.35■□□□□ 0.53
RTP1-201ENST00000312295 SNRKQ9NRH2 765 aa18.35■□□□□ 0.53
RTP1-201ENST00000312295 UBR3Q6ZT12 1888 aa18.35■□□□□ 0.53
RTP1-201ENST00000312295 NPHP1O15259 732 aa18.35■□□□□ 0.53
RTP1-201ENST00000312295 TAF5LO75529 589 aa18.35■□□□□ 0.53
RTP1-201ENST00000312295 PI16Q6UXB8 463 aa18.35■□□□□ 0.53
RTP1-201ENST00000312295 RGS17Q9UGC6 210 aaPredicted RBP18.35■□□□□ 0.53
RTP1-201ENST00000312295 COL24A1Q17RW2 1714 aa18.35■□□□□ 0.53
RTP1-201ENST00000312295 TXNRD1Q16881 649 aa18.34■□□□□ 0.53
RTP1-201ENST00000312295 PROM2Q8N271 834 aa18.34■□□□□ 0.53
RTP1-201ENST00000312295 MPHOSPH8Q99549 860 aa18.34■□□□□ 0.53
RTP1-201ENST00000312295 HAUS7Q99871 368 aa18.34■□□□□ 0.53
RTP1-201ENST00000312295 VGLL2Q8N8G2 317 aa18.34■□□□□ 0.53
RTP1-201ENST00000312295 IFIT1P09914 478 aaKnown RBP18.33■□□□□ 0.53
RTP1-201ENST00000312295 SCARF1Q14162 830 aa18.33■□□□□ 0.53
RTP1-201ENST00000312295 TTC39AQ5SRH9 613 aa18.33■□□□□ 0.53
RTP1-201ENST00000312295 POTEAQ6S8J7 498 aa18.33■□□□□ 0.53
RTP1-201ENST00000312295 ANTXR1Q9H6X2 564 aa18.33■□□□□ 0.53
RTP1-201ENST00000312295 FBXO3Q9UK99 471 aa18.33■□□□□ 0.53
RTP1-201ENST00000312295 AKAP2Q9Y2D5 859 aa18.33■□□□□ 0.53
RTP1-201ENST00000312295 EIF5BO60841 1220 aaKnown RBP18.33■□□□□ 0.52
RTP1-201ENST00000312295 APBA3O96018 575 aa18.33■□□□□ 0.52
RTP1-201ENST00000312295 FKBP4Q02790 459 aaKnown RBP eCLIP18.33■□□□□ 0.52
RTP1-201ENST00000312295 NBR1Q14596 966 aa18.33■□□□□ 0.52
RTP1-201ENST00000312295 LSG1Q9H089 658 aaKnown RBP18.33■□□□□ 0.52
RTP1-201ENST00000312295 TNRC6CQ9HCJ0 1690 aaKnown RBP18.32■□□□□ 0.52
RTP1-201ENST00000312295 PTH1RQ03431 593 aa18.32■□□□□ 0.52
RTP1-201ENST00000312295 PAG1Q9NWQ8 432 aa18.32■□□□□ 0.52
RTP1-201ENST00000312295 RAD50Q92878 1312 aa18.32■□□□□ 0.52
RTP1-201ENST00000312295 PDE8BO95263 885 aa18.31■□□□□ 0.52
RTP1-201ENST00000312295 SLC27A3Q5K4L6 730 aa18.31■□□□□ 0.52
RTP1-201ENST00000312295 ZNF589Q86UQ0 364 aaPredicted RBP18.31■□□□□ 0.52
RTP1-201ENST00000312295 FOXD4L1Q9NU39 408 aa18.31■□□□□ 0.52
RTP1-201ENST00000312295 IGHMBP2P38935 993 aaKnown RBP18.31■□□□□ 0.52
RTP1-201ENST00000312295 NFIXQ14938 502 aa18.31■□□□□ 0.52
RTP1-201ENST00000312295 SEC62Q99442 399 aaKnown RBP18.31■□□□□ 0.52
RTP1-201ENST00000312295 ZNF827Q17R98 1081 aa18.3■□□□□ 0.52
RTP1-201ENST00000312295 CCDC158Q5M9N0 1113 aa18.3■□□□□ 0.52
RTP1-201ENST00000312295 CCDC129Q6ZRS4 1044 aa18.3■□□□□ 0.52
RTP1-201ENST00000312295 KIAA1211Q6ZU35 1233 aa18.3■□□□□ 0.52
RTP1-201ENST00000312295 RUFY2Q8WXA3 655 aa18.3■□□□□ 0.52
RTP1-201ENST00000312295 MCCP23508 829 aa18.3■□□□□ 0.52
RTP1-201ENST00000312295 RABEP1Q15276 862 aa18.3■□□□□ 0.52
RTP1-201ENST00000312295 SLC51AQ86UW1 340 aa18.3■□□□□ 0.52
RTP1-201ENST00000312295 CELF1Q92879 486 aaKnown RBP18.29■□□□□ 0.52
RTP1-201ENST00000312295 NYXQ9GZU5 481 aa18.29■□□□□ 0.52
RTP1-201ENST00000312295 WTIPA6NIX2 430 aaPredicted RBP18.29■□□□□ 0.52
RTP1-201ENST00000312295 PUM3Q15397 648 aaKnown RBP18.29■□□□□ 0.52
RTP1-201ENST00000312295 UPF3BQ9BZI7 483 aaKnown RBP18.29■□□□□ 0.52
RTP1-201ENST00000312295 MROH5Q6ZUA9 1318 aa18.28■□□□□ 0.52
RTP1-201ENST00000312295 GYS1P13807 737 aa18.28■□□□□ 0.52
RTP1-201ENST00000312295 HSP90B1P14625 803 aaKnown RBP18.28■□□□□ 0.52
RTP1-201ENST00000312295 ZAP70P43403 619 aa18.28■□□□□ 0.52
RTP1-201ENST00000312295 PHKA1P46020 1223 aa18.28■□□□□ 0.52
RTP1-201ENST00000312295 NOL8Q76FK4 1167 aaKnown RBP18.28■□□□□ 0.52
RTP1-201ENST00000312295 CARMIL3Q8ND23 1372 aa18.28■□□□□ 0.52
RTP1-201ENST00000312295 MCAMP43121 646 aa18.27■□□□□ 0.52
RTP1-201ENST00000312295 CHRNDQ07001 517 aa18.27■□□□□ 0.52
RTP1-201ENST00000312295 TPTE2Q6XPS3 522 aa18.27■□□□□ 0.52
RTP1-201ENST00000312295 KBTBD3Q8NAB2 608 aa18.27■□□□□ 0.52
RTP1-201ENST00000312295 SNX21Q969T3 373 aa18.27■□□□□ 0.52
RTP1-201ENST00000312295 RTL9Q8NET4 1388 aa18.27■□□□□ 0.52
RTP1-201ENST00000312295 HIP1O00291 1037 aa18.27■□□□□ 0.52
RTP1-201ENST00000312295 HSPA4P34932 840 aa18.27■□□□□ 0.52
RTP1-201ENST00000312295 ANKRD18AQ8IVF6 992 aa18.27■□□□□ 0.52
RTP1-201ENST00000312295 CDC5LQ99459 802 aaKnown RBP18.27■□□□□ 0.52
RTP1-201ENST00000312295 TFCP2L1Q9NZI6 479 aa18.27■□□□□ 0.52
RTP1-201ENST00000312295 CCDC171Q6TFL3 1326 aa18.27■□□□□ 0.51
RTP1-201ENST00000312295 MED23Q9ULK4 1368 aa18.27■□□□□ 0.51
RTP1-201ENST00000312295 PRPF40BQ6NWY9 871 aaKnown RBP18.26■□□□□ 0.51
RTP1-201ENST00000312295 RASEFQ8IZ41 740 aa18.26■□□□□ 0.51
RTP1-201ENST00000312295 CNBD1Q8NA66 436 aa18.26■□□□□ 0.51
RTP1-201ENST00000312295 NLRP3Q96P20 1036 aa18.26■□□□□ 0.51
RTP1-201ENST00000312295 TNS1Q9HBL0 1735 aaKnown RBP18.26■□□□□ 0.51
RTP1-201ENST00000312295 ADRA2BP18089 450 aa18.26■□□□□ 0.51
RTP1-201ENST00000312295 SSFA2P28290 1259 aa18.26■□□□□ 0.51
RTP1-201ENST00000312295 SF3B3Q15393 1217 aaKnown RBP18.26■□□□□ 0.51
RTP1-201ENST00000312295 CCDC102BQ68D86 513 aa18.26■□□□□ 0.51
RTP1-201ENST00000312295 K7ELQ4 463 aaPredicted RBP18.25■□□□□ 0.51
RTP1-201ENST00000312295 KCNJ4P48050 445 aa18.25■□□□□ 0.51
RTP1-201ENST00000312295 NEK4P51957 841 aa18.25■□□□□ 0.51
RTP1-201ENST00000312295 LPIN2Q92539 896 aa18.25■□□□□ 0.51
RTP1-201ENST00000312295 ARAP2Q8WZ64 1704 aa18.25■□□□□ 0.51
RTP1-201ENST00000312295 FGFR2P21802 821 aa18.25■□□□□ 0.51
RTP1-201ENST00000312295 SNX14Q9Y5W7 946 aa18.25■□□□□ 0.51
RTP1-201ENST00000312295 A0A1B0GUL6 1792 aa18.24■□□□□ 0.51
RTP1-201ENST00000312295 RGL2O15211 777 aa18.24■□□□□ 0.51
RTP1-201ENST00000312295 SLC5A1P13866 664 aa18.24■□□□□ 0.51
RTP1-201ENST00000312295 DEKP35659 375 aaKnown RBP18.24■□□□□ 0.51
RTP1-201ENST00000312295 RBM8AQ9Y5S9 174 aaKnown RBP18.24■□□□□ 0.51
RTP1-201ENST00000312295 HSP90AA1P07900 732 aaKnown RBP18.23■□□□□ 0.51
RTP1-201ENST00000312295 CPA1P15085 419 aa18.23■□□□□ 0.51
RTP1-201ENST00000312295 SLC10A5Q5PT55 438 aa18.23■□□□□ 0.51
RTP1-201ENST00000312295 IQSEC3Q9UPP2 1182 aaPredicted RBP18.23■□□□□ 0.51
RTP1-201ENST00000312295 PRR5LQ6MZQ0 368 aa18.23■□□□□ 0.51
RTP1-201ENST00000312295 TAF6LQ9Y6J9 622 aa18.23■□□□□ 0.51
RTP1-201ENST00000312295 ST18O60284 1047 aa18.22■□□□□ 0.51
RTP1-201ENST00000312295 BCAMP50895 628 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms