RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 CTR9Q6PD62 1173 aa11.27□□□□□ -0.61
RBFOX1-201ENST00000311745 REC8O95072 547 aa11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 GCKRQ14397 625 aa11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 KRT222Q8N1A0 295 aa11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 PRPF38AQ8NAV1 312 aaKnown RBP11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 RAPGEF4Q8WZA2 1011 aa11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 METTL22Q9BUU2 404 aaPredicted RBP11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 DONSONQ9NYP3 566 aa11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 SPG7Q9UQ90 795 aa11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 JRKLQ9Y4A0 524 aa11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 LRP6O75581 1613 aa11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 COPS6Q7L5N1 327 aa11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 KCNB2Q92953 911 aa11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 CHAMP1Q96JM3 812 aa11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 TTC14Q96N46 770 aa11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 SNRKQ9NRH2 765 aa11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 COL14A1Q05707 1796 aaKnown RBP11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 CASZ1Q86V15 1759 aa11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 ROBO1Q9Y6N7 1651 aa11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 SLIT2O94813 1529 aa11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 RREB1Q92766 1687 aa11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 PRIM1P49642 420 aaKnown RBP11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 RABL6Q3YEC7 729 aaPredicted RBP11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 RASEFQ8IZ41 740 aa11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 KLHDC4Q8TBB5 520 aa11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 EAF2Q96CJ1 260 aaPredicted RBP11.26□□□□□ -0.61
RBFOX1-201ENST00000311745 TTC41PQ6P2S7 1318 aa11.25□□□□□ -0.61
RBFOX1-201ENST00000311745 RAD50Q92878 1312 aa11.25□□□□□ -0.61
RBFOX1-201ENST00000311745 CASQ1P31415 396 aa11.25□□□□□ -0.61
RBFOX1-201ENST00000311745 SYT10Q6XYQ8 523 aa11.25□□□□□ -0.61
RBFOX1-201ENST00000311745 RILPL2Q969X0 211 aa11.25□□□□□ -0.61
RBFOX1-201ENST00000311745 TTC12Q9H892 705 aaPredicted RBP11.25□□□□□ -0.61
RBFOX1-201ENST00000311745 PHLPP1O60346 1717 aa11.25□□□□□ -0.61
RBFOX1-201ENST00000311745 NWD2Q9ULI1 1742 aa11.25□□□□□ -0.61
RBFOX1-201ENST00000311745 EPB41L2O43491 1005 aaKnown RBP11.24□□□□□ -0.61
RBFOX1-201ENST00000311745 MYL6BP14649 208 aa11.24□□□□□ -0.61
RBFOX1-201ENST00000311745 AIMP1Q12904 312 aaKnown RBP11.24□□□□□ -0.61
RBFOX1-201ENST00000311745 DOT1LQ8TEK3 1739 aa11.24□□□□□ -0.61
RBFOX1-201ENST00000311745 BAG4O95429 457 aaKnown RBP11.24□□□□□ -0.61
RBFOX1-201ENST00000311745 GOLGA6L1Q8N7Z2 621 aa11.24□□□□□ -0.61
RBFOX1-201ENST00000311745 TMX3Q96JJ7 454 aa11.24□□□□□ -0.61
RBFOX1-201ENST00000311745 CWC22Q9HCG8 908 aaKnown RBP11.24□□□□□ -0.61
RBFOX1-201ENST00000311745 DIAPH3Q9NSV4 1193 aa11.24□□□□□ -0.61
RBFOX1-201ENST00000311745 SLAIN2Q9P270 581 aa11.24□□□□□ -0.61
RBFOX1-201ENST00000311745 CTNNA3Q9UI47 895 aa11.24□□□□□ -0.61
RBFOX1-201ENST00000311745 CICQ96RK0 1608 aaPredicted RBP11.24□□□□□ -0.61
RBFOX1-201ENST00000311745 PTH1RQ03431 593 aa11.24□□□□□ -0.61
RBFOX1-201ENST00000311745 NAA30Q147X3 362 aaPredicted RBP11.24□□□□□ -0.61
RBFOX1-201ENST00000311745 AHDC1Q5TGY3 1603 aaPredicted RBP11.23□□□□□ -0.61
RBFOX1-201ENST00000311745 RPAP1Q9BWH6 1393 aaPredicted RBP11.23□□□□□ -0.61
RBFOX1-201ENST00000311745 SNRPA1P09661 255 aaKnown RBP11.23□□□□□ -0.61
RBFOX1-201ENST00000311745 NEK11Q8NG66 645 aa11.23□□□□□ -0.61
RBFOX1-201ENST00000311745 DDX41Q9UJV9 622 aaKnown RBP11.23□□□□□ -0.61
RBFOX1-201ENST00000311745 SNX14Q9Y5W7 946 aa11.23□□□□□ -0.61
RBFOX1-201ENST00000311745 FOXO4P98177 505 aa11.23□□□□□ -0.61
RBFOX1-201ENST00000311745 ST3GAL1Q11201 340 aa11.23□□□□□ -0.61
RBFOX1-201ENST00000311745 PDLIM2Q96JY6 352 aa11.23□□□□□ -0.61
RBFOX1-201ENST00000311745 NUP98P52948 1817 aa11.23□□□□□ -0.61
RBFOX1-201ENST00000311745 MYH3P11055 1940 aa11.22□□□□□ -0.61
RBFOX1-201ENST00000311745 MYO1CO00159 1063 aa11.22□□□□□ -0.61
RBFOX1-201ENST00000311745 PTPN12Q05209 780 aaKnown RBP11.22□□□□□ -0.61
RBFOX1-201ENST00000311745 CASC1Q6TDU7 716 aa11.22□□□□□ -0.61
RBFOX1-201ENST00000311745 RPAINQ86UA6 219 aa11.22□□□□□ -0.61
RBFOX1-201ENST00000311745 MYD88Q99836 296 aa11.22□□□□□ -0.61
RBFOX1-201ENST00000311745 BRMS1Q9HCU9 246 aa11.22□□□□□ -0.61
RBFOX1-201ENST00000311745 LMBRD1Q9NUN5 540 aa11.22□□□□□ -0.61
RBFOX1-201ENST00000311745 RAI14Q9P0K7 980 aa11.22□□□□□ -0.61
RBFOX1-201ENST00000311745 MRVI1Q9Y6F6 885 aa11.22□□□□□ -0.61
RBFOX1-201ENST00000311745 MED23Q9ULK4 1368 aa11.22□□□□□ -0.61
RBFOX1-201ENST00000311745 LARP1Q6PKG0 1096 aaKnown RBP11.22□□□□□ -0.61
RBFOX1-201ENST00000311745 ANKRD7Q92527 254 aa11.22□□□□□ -0.61
RBFOX1-201ENST00000311745 C9orf78Q9NZ63 289 aaPredicted RBP11.22□□□□□ -0.61
RBFOX1-201ENST00000311745 PCDH11XQ9BZA7 1347 aa11.21□□□□□ -0.61
RBFOX1-201ENST00000311745 PCDH11YQ9BZA8 1340 aa11.21□□□□□ -0.61
RBFOX1-201ENST00000311745 NBPF11Q86T75 865 aa11.21□□□□□ -0.61
RBFOX1-201ENST00000311745 TAF6LQ9Y6J9 622 aa11.21□□□□□ -0.61
RBFOX1-201ENST00000311745 MYO5AQ9Y4I1 1855 aaKnown RBP11.21□□□□□ -0.61
RBFOX1-201ENST00000311745 CHGBP05060 677 aa11.21□□□□□ -0.62
RBFOX1-201ENST00000311745 ZSCAN23Q3MJ62 389 aa11.21□□□□□ -0.62
RBFOX1-201ENST00000311745 KRBA2Q6ZNG9 492 aa11.21□□□□□ -0.62
RBFOX1-201ENST00000311745 ANKRD13DQ6ZTN6 518 aa11.21□□□□□ -0.62
RBFOX1-201ENST00000311745 FMNL2Q96PY5 1086 aa11.21□□□□□ -0.62
RBFOX1-201ENST00000311745 ANO2Q9NQ90 1003 aa11.21□□□□□ -0.62
RBFOX1-201ENST00000311745 RBM27Q9P2N5 1060 aaKnown RBP11.21□□□□□ -0.62
RBFOX1-201ENST00000311745 LCMT1Q9UIC8 334 aa11.21□□□□□ -0.62
RBFOX1-201ENST00000311745 AKAP11Q9UKA4 1901 aa11.21□□□□□ -0.62
RBFOX1-201ENST00000311745 TTC36A6NLP5 189 aa11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 NEK4P51957 841 aa11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 MCTP1Q6DN14 999 aa11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 TTLL7Q6ZT98 887 aa11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 COPRSQ9NQ92 184 aa11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 ECHDC1Q9NTX5 307 aa11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 SPEF2Q9C093 1822 aa11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 MYH15Q9Y2K3 1946 aa11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 CCDC91Q7Z6B0 441 aa11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 ARAP2Q8WZ64 1704 aa11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 LRP5O75197 1615 aa11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 H7C1W4 665 aa11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 LARGE1O95461 756 aa11.2□□□□□ -0.62
RBFOX1-201ENST00000311745 NECTIN1Q15223 517 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms