RNA–Protein interactions for RNA: ENST00000311180.8

PDE12-201, Transcript of phosphodiesterase 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE12, Length 8,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE12-201ENST00000311180 RAD50Q92878 1312 aa13.81□□□□□ -0.2
PDE12-201ENST00000311180 GJB2P29033 226 aa13.8□□□□□ -0.2
PDE12-201ENST00000311180 VPS52Q8N1B4 723 aa13.8□□□□□ -0.2
PDE12-201ENST00000311180 ANKRD24Q8TF21 1146 aa13.8□□□□□ -0.2
PDE12-201ENST00000311180 GBP5Q96PP8 586 aa13.8□□□□□ -0.2
PDE12-201ENST00000311180 IDH1O75874 414 aaKnown RBP13.8□□□□□ -0.2
PDE12-201ENST00000311180 HVCN1Q96D96 273 aa13.8□□□□□ -0.2
PDE12-201ENST00000311180 MPHOSPH6Q99547 160 aaKnown RBP13.8□□□□□ -0.2
PDE12-201ENST00000311180 MRPS9P82933 396 aaKnown RBP13.8□□□□□ -0.2
PDE12-201ENST00000311180 MIER3Q7Z3K6 550 aa13.8□□□□□ -0.2
PDE12-201ENST00000311180 IFT20Q8IY31 132 aa13.8□□□□□ -0.2
PDE12-201ENST00000311180 CAVIN4Q5BKX8 364 aa13.8□□□□□ -0.2
PDE12-201ENST00000311180 IARSP41252 1262 aaKnown RBP13.8□□□□□ -0.2
PDE12-201ENST00000311180 NCAPGQ9BPX3 1015 aa13.8□□□□□ -0.2
PDE12-201ENST00000311180 PPP1R12CQ9BZL4 782 aa13.8□□□□□ -0.2
PDE12-201ENST00000311180 CCDC141Q6ZP82 1450 aa13.79□□□□□ -0.2
PDE12-201ENST00000311180 INF2Q27J81 1249 aa13.79□□□□□ -0.2
PDE12-201ENST00000311180 PRR16Q569H4 304 aa13.79□□□□□ -0.2
PDE12-201ENST00000311180 SNX21Q969T3 373 aa13.79□□□□□ -0.2
PDE12-201ENST00000311180 GGNBP2Q9H3C7 697 aa13.79□□□□□ -0.2
PDE12-201ENST00000311180 NPHP3Q7Z494 1330 aa13.79□□□□□ -0.2
PDE12-201ENST00000311180 SLFN5Q08AF3 891 aa13.79□□□□□ -0.2
PDE12-201ENST00000311180 SDCCAG8Q86SQ7 713 aaPredicted RBP13.79□□□□□ -0.2
PDE12-201ENST00000311180 IMPG2Q9BZV3 1241 aa13.79□□□□□ -0.2
PDE12-201ENST00000311180 CETN3O15182 167 aa13.79□□□□□ -0.2
PDE12-201ENST00000311180 ABTB2Q8N961 1025 aa13.79□□□□□ -0.2
PDE12-201ENST00000311180 ZNF652Q9Y2D9 606 aa13.79□□□□□ -0.2
PDE12-201ENST00000311180 PHLDB3Q6NSJ2 640 aa13.79□□□□□ -0.2
PDE12-201ENST00000311180 MRPS27Q92552 414 aaKnown RBP13.79□□□□□ -0.2
PDE12-201ENST00000311180 AK9Q5TCS8 1911 aa13.79□□□□□ -0.2
PDE12-201ENST00000311180 TRIM35Q9UPQ4 493 aa13.79□□□□□ -0.2
PDE12-201ENST00000311180 STAT6P42226 847 aa13.79□□□□□ -0.2
PDE12-201ENST00000311180 NLRP5P59047 1200 aa13.79□□□□□ -0.2
PDE12-201ENST00000311180 BICD1Q96G01 975 aa13.79□□□□□ -0.2
PDE12-201ENST00000311180 WDHD1O75717 1129 aaPredicted RBP13.78□□□□□ -0.2
PDE12-201ENST00000311180 XRCC6P12956 609 aaKnown RBP eCLIP13.78□□□□□ -0.2
PDE12-201ENST00000311180 ARL1P40616 181 aaPredicted RBP13.78□□□□□ -0.2
PDE12-201ENST00000311180 TSR2Q969E8 191 aaKnown RBP13.78□□□□□ -0.2
PDE12-201ENST00000311180 TMEM57Q8N5G2 664 aa13.78□□□□□ -0.2
PDE12-201ENST00000311180 UTP11Q9Y3A2 253 aaKnown RBP13.78□□□□□ -0.2
PDE12-201ENST00000311180 WDR97A6NE52 1622 aa13.78□□□□□ -0.2
PDE12-201ENST00000311180 PDE4BQ07343 736 aa13.78□□□□□ -0.2
PDE12-201ENST00000311180 SMARCA4P51532 1647 aa13.78□□□□□ -0.2
PDE12-201ENST00000311180 MYO10Q9HD67 2058 aa13.78□□□□□ -0.2
PDE12-201ENST00000311180 PPP2R3AQ06190 1150 aa13.78□□□□□ -0.2
PDE12-201ENST00000311180 ARHGAP5Q13017 1502 aa13.78□□□□□ -0.2
PDE12-201ENST00000311180 KIAA1107Q9UPP5 1409 aa13.78□□□□□ -0.2
PDE12-201ENST00000311180 MTMR3Q13615 1198 aa13.78□□□□□ -0.2
PDE12-201ENST00000311180 TBC1D31Q96DN5 1066 aa13.78□□□□□ -0.2
PDE12-201ENST00000311180 UTP14AQ9BVJ6 771 aaKnown RBP13.78□□□□□ -0.2
PDE12-201ENST00000311180 SPATS2LQ9NUQ6 558 aaKnown RBP13.78□□□□□ -0.2
PDE12-201ENST00000311180 RAB11FIP4Q86YS3 637 aa13.77□□□□□ -0.2
PDE12-201ENST00000311180 ATP6V0A2Q9Y487 856 aa13.77□□□□□ -0.2
PDE12-201ENST00000311180 CASKIN1Q8WXD9 1431 aa13.77□□□□□ -0.2
PDE12-201ENST00000311180 CECR2Q9BXF3 1484 aa13.77□□□□□ -0.2
PDE12-201ENST00000311180 PPP2R5EQ16537 467 aa13.77□□□□□ -0.2
PDE12-201ENST00000311180 VWA3BQ502W6 1294 aa13.77□□□□□ -0.2
PDE12-201ENST00000311180 TACC3Q9Y6A5 838 aa13.77□□□□□ -0.2
PDE12-201ENST00000311180 IFIT1P09914 478 aaKnown RBP13.77□□□□□ -0.2
PDE12-201ENST00000311180 GOLGA4Q13439 2230 aaKnown RBP13.77□□□□□ -0.2
PDE12-201ENST00000311180 PPP1R7Q15435 360 aa13.77□□□□□ -0.21
PDE12-201ENST00000311180 RLBP1P12271 317 aa13.77□□□□□ -0.21
PDE12-201ENST00000311180 BIN1O00499 593 aa13.77□□□□□ -0.21
PDE12-201ENST00000311180 GKAP1Q5VSY0 366 aaPredicted RBP13.77□□□□□ -0.21
PDE12-201ENST00000311180 NUTM2AQ8IVF1 878 aaPredicted RBP13.77□□□□□ -0.21
PDE12-201ENST00000311180 NFE2L2Q16236 605 aa13.76□□□□□ -0.21
PDE12-201ENST00000311180 HAUS8Q9BT25 410 aa13.76□□□□□ -0.21
PDE12-201ENST00000311180 IMPACTQ9P2X3 320 aa13.76□□□□□ -0.21
PDE12-201ENST00000311180 VIMP08670 466 aaKnown RBP13.76□□□□□ -0.21
PDE12-201ENST00000311180 IQCDQ96DY2 449 aa13.76□□□□□ -0.21
PDE12-201ENST00000311180 TSKSQ9UJT2 592 aa13.76□□□□□ -0.21
PDE12-201ENST00000311180 TTC36A6NLP5 189 aa13.76□□□□□ -0.21
PDE12-201ENST00000311180 CABP4P57796 275 aa13.76□□□□□ -0.21
PDE12-201ENST00000311180 CCDC186Q7Z3E2 898 aa13.76□□□□□ -0.21
PDE12-201ENST00000311180 TTF2Q9UNY4 1162 aaKnown RBP13.76□□□□□ -0.21
PDE12-201ENST00000311180 CHMP4BP1P59074 171 aa13.76□□□□□ -0.21
PDE12-201ENST00000311180 ELP1O95163 1332 aa13.76□□□□□ -0.21
PDE12-201ENST00000311180 IFIT3O14879 490 aaKnown RBP13.76□□□□□ -0.21
PDE12-201ENST00000311180 CCDC170Q8IYT3 715 aa13.76□□□□□ -0.21
PDE12-201ENST00000311180 GOLGA8AA7E2F4 631 aa13.76□□□□□ -0.21
PDE12-201ENST00000311180 I3L4J1 428 aa13.76□□□□□ -0.21
PDE12-201ENST00000311180 GCKP35557 465 aa13.76□□□□□ -0.21
PDE12-201ENST00000311180 METAP2P50579 478 aaKnown RBP eCLIP13.76□□□□□ -0.21
PDE12-201ENST00000311180 SRGAP1Q7Z6B7 1085 aa13.76□□□□□ -0.21
PDE12-201ENST00000311180 TYRO3Q06418 890 aa13.76□□□□□ -0.21
PDE12-201ENST00000311180 NEK11Q8NG66 645 aa13.76□□□□□ -0.21
PDE12-201ENST00000311180 IDEP14735 1019 aa13.75□□□□□ -0.21
PDE12-201ENST00000311180 INTS4Q96HW7 963 aaKnown RBP13.75□□□□□ -0.21
PDE12-201ENST00000311180 BTBD11A6QL63 1104 aa13.75□□□□□ -0.21
PDE12-201ENST00000311180 ZSCAN29Q8IWY8 852 aaPredicted RBP13.75□□□□□ -0.21
PDE12-201ENST00000311180 CNNM2Q9H8M5 875 aa13.75□□□□□ -0.21
PDE12-201ENST00000311180 AMOTQ4VCS5 1084 aa13.75□□□□□ -0.21
PDE12-201ENST00000311180 RILPL1Q5EBL4 403 aa13.75□□□□□ -0.21
PDE12-201ENST00000311180 ZNF444Q8N0Y2 327 aaPredicted RBP13.75□□□□□ -0.21
PDE12-201ENST00000311180 PPFIA4O75335 1185 aa13.75□□□□□ -0.21
PDE12-201ENST00000311180 RBM5P52756 815 aaKnown RBP eCLIP13.75□□□□□ -0.21
PDE12-201ENST00000311180 MYRIPQ8NFW9 859 aa13.75□□□□□ -0.21
PDE12-201ENST00000311180 RTL1A6NKG5 1358 aa13.75□□□□□ -0.21
PDE12-201ENST00000311180 NCOA2Q15596 1464 aa13.75□□□□□ -0.21
PDE12-201ENST00000311180 GOLGA6BA6NDN3 693 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms