RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 PRC1O43663 620 aa12.9□□□□□ -0.34
VCPIP1-201ENST00000310421 GJB2P29033 226 aa12.9□□□□□ -0.34
VCPIP1-201ENST00000310421 CCDC155Q8N6L0 562 aa12.9□□□□□ -0.34
VCPIP1-201ENST00000310421 JAKMIP2Q96AA8 810 aa12.9□□□□□ -0.34
VCPIP1-201ENST00000310421 JADE2Q9NQC1 790 aa12.9□□□□□ -0.34
VCPIP1-201ENST00000310421 CCDC171Q6TFL3 1326 aa12.9□□□□□ -0.34
VCPIP1-201ENST00000310421 ALDH1L1O75891 902 aa12.9□□□□□ -0.34
VCPIP1-201ENST00000310421 ATP6V1AP38606 617 aa12.9□□□□□ -0.34
VCPIP1-201ENST00000310421 NAP1L4Q99733 375 aaKnown RBP12.9□□□□□ -0.34
VCPIP1-201ENST00000310421 PAXBP1Q9Y5B6 917 aa12.9□□□□□ -0.34
VCPIP1-201ENST00000310421 TTC41PQ6P2S7 1318 aa12.9□□□□□ -0.34
VCPIP1-201ENST00000310421 PCDH11XQ9BZA7 1347 aa12.9□□□□□ -0.34
VCPIP1-201ENST00000310421 PCDH11YQ9BZA8 1340 aa12.9□□□□□ -0.34
VCPIP1-201ENST00000310421 IDEP14735 1019 aa12.9□□□□□ -0.34
VCPIP1-201ENST00000310421 CCDC82Q8N4S0 544 aa12.9□□□□□ -0.34
VCPIP1-201ENST00000310421 SLC26A6Q9BXS9 759 aa12.9□□□□□ -0.34
VCPIP1-201ENST00000310421 WDR62O43379 1518 aa12.9□□□□□ -0.35
VCPIP1-201ENST00000310421 ZBTB43O43298 467 aa12.9□□□□□ -0.35
VCPIP1-201ENST00000310421 IL15P40933 162 aaPredicted RBP12.9□□□□□ -0.35
VCPIP1-201ENST00000310421 UBE4AQ14139 1066 aa12.9□□□□□ -0.35
VCPIP1-201ENST00000310421 C14orf93Q9H972 538 aaKnown RBP12.9□□□□□ -0.35
VCPIP1-201ENST00000310421 SYKP43405 635 aa12.89□□□□□ -0.35
VCPIP1-201ENST00000310421 GIMAP7Q8NHV1 300 aa12.89□□□□□ -0.35
VCPIP1-201ENST00000310421 HOOK2Q96ED9 719 aa12.89□□□□□ -0.35
VCPIP1-201ENST00000310421 TTC14Q96N46 770 aa12.89□□□□□ -0.35
VCPIP1-201ENST00000310421 ZBTB3Q9H5J0 574 aa12.89□□□□□ -0.35
VCPIP1-201ENST00000310421 GPTP24298 496 aa12.89□□□□□ -0.35
VCPIP1-201ENST00000310421 NOP2P46087 812 aaKnown RBP12.89□□□□□ -0.35
VCPIP1-201ENST00000310421 ANKS4BQ8N8V4 417 aa12.89□□□□□ -0.35
VCPIP1-201ENST00000310421 EYA3Q99504 573 aa12.89□□□□□ -0.35
VCPIP1-201ENST00000310421 EMILIN1Q9Y6C2 1016 aa12.89□□□□□ -0.35
VCPIP1-201ENST00000310421 NLRP3Q96P20 1036 aa12.89□□□□□ -0.35
VCPIP1-201ENST00000310421 ORC3Q9UBD5 711 aaPredicted RBP12.89□□□□□ -0.35
VCPIP1-201ENST00000310421 GNA11P29992 359 aa12.89□□□□□ -0.35
VCPIP1-201ENST00000310421 CEP128Q6ZU80 1094 aa12.89□□□□□ -0.35
VCPIP1-201ENST00000310421 THUMPD2Q9BTF0 503 aaKnown RBP12.89□□□□□ -0.35
VCPIP1-201ENST00000310421 STK24Q9Y6E0 443 aa12.89□□□□□ -0.35
VCPIP1-201ENST00000310421 PSMA7O14818 248 aa12.89□□□□□ -0.35
VCPIP1-201ENST00000310421 LMOD1P29536 600 aaPredicted RBP12.89□□□□□ -0.35
VCPIP1-201ENST00000310421 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.89□□□□□ -0.35
VCPIP1-201ENST00000310421 RRP36Q96EU6 259 aaKnown RBP12.88□□□□□ -0.35
VCPIP1-201ENST00000310421 SMARCA5O60264 1052 aaPredicted RBP12.88□□□□□ -0.35
VCPIP1-201ENST00000310421 PHACTR2O75167 634 aa12.88□□□□□ -0.35
VCPIP1-201ENST00000310421 CYLC1P35663 651 aaPredicted RBP12.88□□□□□ -0.35
VCPIP1-201ENST00000310421 JDP2Q8WYK2 163 aa12.88□□□□□ -0.35
VCPIP1-201ENST00000310421 TMCO5BA8MYB1 307 aa12.88□□□□□ -0.35
VCPIP1-201ENST00000310421 LIG1P18858 919 aa12.88□□□□□ -0.35
VCPIP1-201ENST00000310421 TNNI2P48788 182 aa12.88□□□□□ -0.35
VCPIP1-201ENST00000310421 PRPF4BQ13523 1007 aaKnown RBP12.88□□□□□ -0.35
VCPIP1-201ENST00000310421 UVSSAQ2YD98 709 aa12.88□□□□□ -0.35
VCPIP1-201ENST00000310421 GLT8D2Q9H1C3 349 aa12.88□□□□□ -0.35
VCPIP1-201ENST00000310421 CCDC8Q9H0W5 538 aaPredicted RBP12.88□□□□□ -0.35
VCPIP1-201ENST00000310421 CCT2P78371 535 aaKnown RBP12.88□□□□□ -0.35
VCPIP1-201ENST00000310421 SMARCC2Q8TAQ2 1214 aa12.88□□□□□ -0.35
VCPIP1-201ENST00000310421 SPAG5Q96R06 1193 aa12.88□□□□□ -0.35
VCPIP1-201ENST00000310421 MAP3K5Q99683 1374 aa12.88□□□□□ -0.35
VCPIP1-201ENST00000310421 RAB3IL1Q8TBN0 382 aa12.88□□□□□ -0.35
VCPIP1-201ENST00000310421 ATP2B3Q16720 1220 aa12.87□□□□□ -0.35
VCPIP1-201ENST00000310421 ZCRB1Q8TBF4 217 aaKnown RBP12.87□□□□□ -0.35
VCPIP1-201ENST00000310421 MBIPQ9NS73 344 aa12.87□□□□□ -0.35
VCPIP1-201ENST00000310421 TBC1D9Q6ZT07 1266 aa12.87□□□□□ -0.35
VCPIP1-201ENST00000310421 TMC6Q7Z403 805 aa12.87□□□□□ -0.35
VCPIP1-201ENST00000310421 CCDC77Q9BR77 488 aa12.87□□□□□ -0.35
VCPIP1-201ENST00000310421 ATP2A2P16615 1042 aaKnown RBP12.87□□□□□ -0.35
VCPIP1-201ENST00000310421 NAA16Q6N069 864 aaPredicted RBP12.87□□□□□ -0.35
VCPIP1-201ENST00000310421 SNW1Q13573 536 aaKnown RBP12.87□□□□□ -0.35
VCPIP1-201ENST00000310421 TSGA10Q9BZW7 698 aa12.87□□□□□ -0.35
VCPIP1-201ENST00000310421 RBM28Q9NW13 759 aaKnown RBP12.87□□□□□ -0.35
VCPIP1-201ENST00000310421 PLCH2O75038 1416 aa12.87□□□□□ -0.35
VCPIP1-201ENST00000310421 HAUS2Q9NVX0 235 aa12.87□□□□□ -0.35
VCPIP1-201ENST00000310421 CCDC117Q8IWD4 279 aaPredicted RBP12.87□□□□□ -0.35
VCPIP1-201ENST00000310421 CDCA7Q9BWT1 371 aaPredicted RBP12.87□□□□□ -0.35
VCPIP1-201ENST00000310421 ACEP12821 1306 aa12.87□□□□□ -0.35
VCPIP1-201ENST00000310421 HDAC1Q13547 482 aaPredicted RBP12.87□□□□□ -0.35
VCPIP1-201ENST00000310421 N4BP3O15049 544 aa12.86□□□□□ -0.35
VCPIP1-201ENST00000310421 A0A1W2PRG0 241 aa12.86□□□□□ -0.35
VCPIP1-201ENST00000310421 NAPAP54920 295 aa12.86□□□□□ -0.35
VCPIP1-201ENST00000310421 GRM8O00222 908 aa12.86□□□□□ -0.35
VCPIP1-201ENST00000310421 HSF2BPO75031 334 aa12.86□□□□□ -0.35
VCPIP1-201ENST00000310421 HEATR3Q7Z4Q2 680 aa12.86□□□□□ -0.35
VCPIP1-201ENST00000310421 PI4KAP2A4QPH2 592 aa12.86□□□□□ -0.35
VCPIP1-201ENST00000310421 AKR1B10O60218 316 aa12.86□□□□□ -0.35
VCPIP1-201ENST00000310421 PI4KAP1Q8N8J0 262 aa12.86□□□□□ -0.35
VCPIP1-201ENST00000310421 MCMDC2Q4G0Z9 681 aa12.86□□□□□ -0.35
VCPIP1-201ENST00000310421 DHX37Q8IY37 1157 aaKnown RBP12.86□□□□□ -0.35
VCPIP1-201ENST00000310421 DDX23Q9BUQ8 820 aaKnown RBP12.86□□□□□ -0.35
VCPIP1-201ENST00000310421 ATP7AQ04656 1500 aa12.86□□□□□ -0.35
VCPIP1-201ENST00000310421 GAS8O95995 478 aa12.86□□□□□ -0.35
VCPIP1-201ENST00000310421 MAATS1Q7Z4T9 603 aa12.86□□□□□ -0.35
VCPIP1-201ENST00000310421 IDI1Q13907 227 aa12.86□□□□□ -0.35
VCPIP1-201ENST00000310421 CFAP57Q96MR6 1250 aa12.86□□□□□ -0.35
VCPIP1-201ENST00000310421 PARP3Q9Y6F1 533 aa12.86□□□□□ -0.35
VCPIP1-201ENST00000310421 NPATQ14207 1427 aa12.86□□□□□ -0.35
VCPIP1-201ENST00000310421 ZNF165P49910 485 aa12.85□□□□□ -0.35
VCPIP1-201ENST00000310421 MAP3K9P80192 1104 aa12.85□□□□□ -0.35
VCPIP1-201ENST00000310421 IL2RBP14784 551 aa12.85□□□□□ -0.35
VCPIP1-201ENST00000310421 BRPF3Q9ULD4 1205 aa12.85□□□□□ -0.35
VCPIP1-201ENST00000310421 F6X3S4 739 aa12.85□□□□□ -0.35
VCPIP1-201ENST00000310421 URI1O94763 535 aaPredicted RBP12.85□□□□□ -0.35
VCPIP1-201ENST00000310421 SLU7O95391 586 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms